RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 FRMPD3Q5JV73 1810 aa7.19□□□□□ -1.26
FXN-205ENST00000498653 ADCY3O60266 1144 aa7.18□□□□□ -1.26
FXN-205ENST00000498653 ECE2O60344 883 aa7.18□□□□□ -1.26
FXN-205ENST00000498653 ZIC2O95409 532 aaPredicted RBP7.18□□□□□ -1.26
FXN-205ENST00000498653 U2AF1L5P0DN76 240 aaPredicted RBP7.18□□□□□ -1.26
FXN-205ENST00000498653 HOXD10P28358 340 aa7.18□□□□□ -1.26
FXN-205ENST00000498653 U2AF1Q01081 240 aaKnown RBP eCLIP7.18□□□□□ -1.26
FXN-205ENST00000498653 PODNQ7Z5L7 613 aa7.18□□□□□ -1.26
FXN-205ENST00000498653 NECTIN2Q92692 538 aa7.18□□□□□ -1.26
FXN-205ENST00000498653 TIFAQ96CG3 184 aa7.18□□□□□ -1.26
FXN-205ENST00000498653 NIP7Q9Y221 180 aaKnown RBP eCLIP7.18□□□□□ -1.26
FXN-205ENST00000498653 EMILIN1Q9Y6C2 1016 aa7.18□□□□□ -1.26
FXN-205ENST00000498653 ABCC4O15439 1325 aa7.18□□□□□ -1.26
FXN-205ENST00000498653 BRWD1Q9NSI6 2320 aa7.18□□□□□ -1.26
FXN-205ENST00000498653 SPTBN2O15020 2390 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 CCL15-CCL14A0A0B4J2E2 113 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 SOWAHBA6NEL2 793 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 POTEMA6NI47 508 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 ZZEF1O43149 2961 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 FMNL1O95466 1100 aaPredicted RBP7.17□□□□□ -1.26
FXN-205ENST00000498653 STARD3NLO95772 234 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 CCL15Q16663 113 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 ARSIQ5FYB1 569 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 TMC1Q8TDI8 760 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 PXYLP1Q8TE99 480 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 RBM17Q96I25 401 aaKnown RBP7.17□□□□□ -1.26
FXN-205ENST00000498653 GMLQ99445 158 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 SLC52A2Q9HAB3 445 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 PLSCR2Q9NRY7 297 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 OGDHLQ9ULD0 1010 aa7.17□□□□□ -1.26
FXN-205ENST00000498653 USP9XQ93008 2570 aaPredicted RBP7.16□□□□□ -1.26
FXN-205ENST00000498653 PRRC2BQ5JSZ5 2229 aaKnown RBP7.16□□□□□ -1.26
FXN-205ENST00000498653 ANKRD36CQ5JPF3 1778 aa7.16□□□□□ -1.26
FXN-205ENST00000498653 UNCXA6NJT0 531 aa7.16□□□□□ -1.26
FXN-205ENST00000498653 HOXB1P14653 301 aaPredicted RBP7.16□□□□□ -1.26
FXN-205ENST00000498653 IGFBP4P22692 258 aa7.16□□□□□ -1.26
FXN-205ENST00000498653 DGLUCYQ7Z3D6 616 aa7.16□□□□□ -1.26
FXN-205ENST00000498653 OPTNQ96CV9 577 aa7.16□□□□□ -1.26
FXN-205ENST00000498653 RMDN1Q96DB5 314 aa7.16□□□□□ -1.26
FXN-205ENST00000498653 TERF2IPQ9NYB0 399 aa7.16□□□□□ -1.26
FXN-205ENST00000498653 TECTAO75443 2155 aa7.16□□□□□ -1.26
FXN-205ENST00000498653 CEP250Q9BV73 2442 aa7.16□□□□□ -1.26
FXN-205ENST00000498653 GBF1Q92538 1859 aa7.15□□□□□ -1.26
FXN-205ENST00000498653 PRR23AA6NEV1 266 aa7.15□□□□□ -1.26
FXN-205ENST00000498653 PROB1E7EW31 1015 aa7.15□□□□□ -1.26
FXN-205ENST00000498653 ALADP13716 330 aa7.15□□□□□ -1.26
FXN-205ENST00000498653 HELBQ8NG08 1087 aaPredicted RBP7.15□□□□□ -1.26
FXN-205ENST00000498653 CPA4Q9UI42 421 aa7.15□□□□□ -1.26
FXN-205ENST00000498653 CLSPNQ9HAW4 1339 aa7.15□□□□□ -1.26
FXN-205ENST00000498653 ECM29Q5VYK3 1845 aa7.15□□□□□ -1.27
FXN-205ENST00000498653 DOCK3Q8IZD9 2030 aa7.15□□□□□ -1.27
FXN-205ENST00000498653 SMG1Q96Q15 3661 aaKnown RBP7.14□□□□□ -1.27
FXN-205ENST00000498653 BTBD19C9JJ37 291 aa7.14□□□□□ -1.27
FXN-205ENST00000498653 WNT10BO00744 389 aa7.14□□□□□ -1.27
FXN-205ENST00000498653 SEMA3EO15041 775 aa7.14□□□□□ -1.27
FXN-205ENST00000498653 A1BGP04217 495 aa7.14□□□□□ -1.27
FXN-205ENST00000498653 NUDT7P0C024 238 aa7.14□□□□□ -1.27
FXN-205ENST00000498653 NUP98P52948 1817 aa7.14□□□□□ -1.27
FXN-205ENST00000498653 RSBN1LQ6PCB5 846 aaPredicted RBP7.14□□□□□ -1.27
FXN-205ENST00000498653 POTEGQ6S5H5 508 aa7.14□□□□□ -1.27
FXN-205ENST00000498653 SP8Q8IXZ3 490 aa7.14□□□□□ -1.27
FXN-205ENST00000498653 AGBL3Q8NEM8 1001 aa7.14□□□□□ -1.27
FXN-205ENST00000498653 RNPC3Q96LT9 517 aaKnown RBP7.14□□□□□ -1.27
FXN-205ENST00000498653 GGNBP2Q9H3C7 697 aa7.14□□□□□ -1.27
FXN-205ENST00000498653 ZCCHC17Q9NP64 241 aaKnown RBP7.14□□□□□ -1.27
FXN-205ENST00000498653 IBTKQ9P2D0 1353 aaPredicted RBP7.14□□□□□ -1.27
FXN-205ENST00000498653 ZNF652Q9Y2D9 606 aa7.14□□□□□ -1.27
FXN-205ENST00000498653 ZNF462Q96JM2 2506 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 AK9Q5TCS8 1911 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 HEG1Q9ULI3 1381 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 HELZ2Q9BYK8 2649 aaKnown RBP7.13□□□□□ -1.27
FXN-205ENST00000498653 POTEB3A0JP26 581 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 USP17L8P0C7I0 530 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 PBX2P40425 430 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 FLT3LGP49771 235 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 EPHB4P54760 987 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 IRF5Q13568 498 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 WASHC4Q2M389 1173 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 PLEKHO1Q53GL0 409 aaPredicted RBP7.13□□□□□ -1.27
FXN-205ENST00000498653 POTEBQ6S5H4 581 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 GJD3Q8N144 294 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 MICALL1Q8N3F8 863 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 BADQ92934 168 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 ZKSCAN4Q969J2 545 aaPredicted RBP7.13□□□□□ -1.27
FXN-205ENST00000498653 FAM163AQ96GL9 167 aaPredicted RBP7.13□□□□□ -1.27
FXN-205ENST00000498653 MFSD14AQ96MC6 490 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 TMX4Q9H1E5 349 aaPredicted RBP7.13□□□□□ -1.27
FXN-205ENST00000498653 ELP3Q9H9T3 547 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 SH2B1Q9NRF2 756 aaPredicted RBP7.13□□□□□ -1.27
FXN-205ENST00000498653 FRYLO94915 3013 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 RLFQ13129 1914 aa7.13□□□□□ -1.27
FXN-205ENST00000498653 FYB1O15117 783 aa7.12□□□□□ -1.27
FXN-205ENST00000498653 DCXO43602 365 aa7.12□□□□□ -1.27
FXN-205ENST00000498653 GTF2E1P29083 439 aaPredicted RBP7.12□□□□□ -1.27
FXN-205ENST00000498653 PIP4K2AP48426 406 aaPredicted RBP7.12□□□□□ -1.27
FXN-205ENST00000498653 GTF2A2P52657 109 aa7.12□□□□□ -1.27
FXN-205ENST00000498653 C1orf141Q5JVX7 400 aa7.12□□□□□ -1.27
FXN-205ENST00000498653 HERVK_113Q902F9 699 aa7.12□□□□□ -1.27
FXN-205ENST00000498653 FRYQ5TBA9 3013 aa7.12□□□□□ -1.27
FXN-205ENST00000498653 SIPA1L3O60292 1781 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 1427.3 ms