RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 CCNJLQ8IV13 435 aa5.14□□□□□ -1.59
SGMS1-205ENST00000498514 ADAMTS6Q9UKP5 1117 aa5.14□□□□□ -1.59
SGMS1-205ENST00000498514 ECEL1O95672 775 aa5.13□□□□□ -1.59
SGMS1-205ENST00000498514 FAM87AP0C7U9 286 aa5.13□□□□□ -1.59
SGMS1-205ENST00000498514 GRIA4P48058 902 aa5.13□□□□□ -1.59
SGMS1-205ENST00000498514 MESP2Q0VG99 397 aa5.13□□□□□ -1.59
SGMS1-205ENST00000498514 PDE3AQ14432 1141 aa5.13□□□□□ -1.59
SGMS1-205ENST00000498514 FAM181AQ8N9Y4 354 aa5.13□□□□□ -1.59
SGMS1-205ENST00000498514 LRRN4CLQ8ND94 238 aa5.13□□□□□ -1.59
SGMS1-205ENST00000498514 BHLHE22Q8NFJ8 381 aaPredicted RBP5.13□□□□□ -1.59
SGMS1-205ENST00000498514 GTF3C2Q8WUA4 911 aaPredicted RBP5.13□□□□□ -1.59
SGMS1-205ENST00000498514 TRIM56Q9BRZ2 755 aaKnown RBP5.13□□□□□ -1.59
SGMS1-205ENST00000498514 LIN7BQ9HAP6 207 aa5.13□□□□□ -1.59
SGMS1-205ENST00000498514 SYNGAP1Q96PV0 1343 aa5.13□□□□□ -1.59
SGMS1-205ENST00000498514 A0A1W2PP55 124 aa5.12□□□□□ -1.59
SGMS1-205ENST00000498514 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
SGMS1-205ENST00000498514 POLR3DP05423 398 aaPredicted RBP5.12□□□□□ -1.59
SGMS1-205ENST00000498514 CD96P40200 585 aa5.12□□□□□ -1.59
SGMS1-205ENST00000498514 CDK5R2Q13319 367 aa5.12□□□□□ -1.59
SGMS1-205ENST00000498514 IFI16Q16666 785 aaKnown RBP5.12□□□□□ -1.59
SGMS1-205ENST00000498514 TOX2Q96NM4 488 aa5.12□□□□□ -1.59
SGMS1-205ENST00000498514 TCF12Q99081 682 aa5.12□□□□□ -1.59
SGMS1-205ENST00000498514 WDR18Q9BV38 432 aa5.12□□□□□ -1.59
SGMS1-205ENST00000498514 FAM53CQ9NYF3 392 aa5.12□□□□□ -1.59
SGMS1-205ENST00000498514 PPP1R9AQ9ULJ8 1098 aa5.12□□□□□ -1.59
SGMS1-205ENST00000498514 LRRC10BA6NIK2 292 aa5.11□□□□□ -1.59
SGMS1-205ENST00000498514 B3GALT4O96024 378 aa5.11□□□□□ -1.59
SGMS1-205ENST00000498514 AOC3Q16853 763 aa5.11□□□□□ -1.59
SGMS1-205ENST00000498514 ARHGAP27Q6ZUM4 889 aa5.11□□□□□ -1.59
SGMS1-205ENST00000498514 CCER1Q8TC90 406 aaPredicted RBP5.11□□□□□ -1.59
SGMS1-205ENST00000498514 PIDD1Q9HB75 910 aa5.11□□□□□ -1.59
SGMS1-205ENST00000498514 MKNK2Q9HBH9 465 aa5.11□□□□□ -1.59
SGMS1-205ENST00000498514 TMEM265A0A087WTH1 108 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 FAM13AO94988 1023 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 ZNF865P0CJ78 1059 aaPredicted RBP5.1□□□□□ -1.59
SGMS1-205ENST00000498514 NPR3P17342 541 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 RAP1GAPP47736 663 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 AP3B2Q13367 1082 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 MTMR3Q13615 1198 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 ANGEL2Q5VTE6 544 aaKnown RBP5.1□□□□□ -1.59
SGMS1-205ENST00000498514 SLC23A3Q6PIS1 610 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 ZSWIM9Q86XI8 627 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 GALNT12Q8IXK2 581 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 FLAD1Q8NFF5 587 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 PBXIP1Q96AQ6 731 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 HRASLS5Q96KN8 279 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 ATXN3LQ9H3M9 355 aa5.1□□□□□ -1.59
SGMS1-205ENST00000498514 TMPRSS2O15393 492 aa5.09□□□□□ -1.59
SGMS1-205ENST00000498514 CEACAM5P06731 702 aa5.09□□□□□ -1.59
SGMS1-205ENST00000498514 SLFN14P0C7P3 912 aa5.09□□□□□ -1.59
SGMS1-205ENST00000498514 MLANAQ16655 118 aa5.09□□□□□ -1.59
SGMS1-205ENST00000498514 GJD3Q8N144 294 aa5.09□□□□□ -1.59
SGMS1-205ENST00000498514 CRIM1Q9NZV1 1036 aa5.09□□□□□ -1.59
SGMS1-205ENST00000498514 FZD6O60353 706 aa5.08□□□□□ -1.6
SGMS1-205ENST00000498514 CFPP27918 469 aa5.08□□□□□ -1.6
SGMS1-205ENST00000498514 KCNMB1Q16558 191 aa5.08□□□□□ -1.6
SGMS1-205ENST00000498514 CILP2Q8IUL8 1156 aa5.08□□□□□ -1.6
SGMS1-205ENST00000498514 SMYD4Q8IYR2 804 aaPredicted RBP5.08□□□□□ -1.6
SGMS1-205ENST00000498514 ZSCAN18Q8TBC5 510 aaPredicted RBP5.08□□□□□ -1.6
SGMS1-205ENST00000498514 FANCD2OSQ96PS1 177 aa5.08□□□□□ -1.6
SGMS1-205ENST00000498514 ZNF576Q9H609 170 aa5.08□□□□□ -1.6
SGMS1-205ENST00000498514 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.08□□□□□ -1.6
SGMS1-205ENST00000498514 U3KQE9 123 aa5.08□□□□□ -1.6
SGMS1-205ENST00000498514 ZNF503-AS2A6NEH8 195 aa5.07□□□□□ -1.6
SGMS1-205ENST00000498514 LEFTY1O75610 366 aa5.07□□□□□ -1.6
SGMS1-205ENST00000498514 TSPAN15O95858 294 aa5.07□□□□□ -1.6
SGMS1-205ENST00000498514 LIG1P18858 919 aa5.07□□□□□ -1.6
SGMS1-205ENST00000498514 ITPKAP23677 461 aa5.07□□□□□ -1.6
SGMS1-205ENST00000498514 OXCT1P55809 520 aa5.07□□□□□ -1.6
SGMS1-205ENST00000498514 ID3Q02535 119 aa5.07□□□□□ -1.6
SGMS1-205ENST00000498514 LILRA6Q6PI73 481 aa5.07□□□□□ -1.6
SGMS1-205ENST00000498514 WDR89Q96FK6 387 aaPredicted RBP5.07□□□□□ -1.6
SGMS1-205ENST00000498514 PPP1R16BQ96T49 567 aa5.07□□□□□ -1.6
SGMS1-205ENST00000498514 DUSP23Q9BVJ7 150 aa5.07□□□□□ -1.6
SGMS1-205ENST00000498514 PLAGL2Q9UPG8 496 aa5.07□□□□□ -1.6
SGMS1-205ENST00000498514 RNGTTO60942 597 aaKnown RBP5.06□□□□□ -1.6
SGMS1-205ENST00000498514 KIAA0319Q5VV43 1072 aa5.06□□□□□ -1.6
SGMS1-205ENST00000498514 ANKLE2Q86XL3 938 aa5.06□□□□□ -1.6
SGMS1-205ENST00000498514 LRRC56Q8IYG6 542 aaPredicted RBP5.06□□□□□ -1.6
SGMS1-205ENST00000498514 EHD4Q9H223 541 aa5.06□□□□□ -1.6
SGMS1-205ENST00000498514 CCDC86Q9H6F5 360 aaKnown RBP5.06□□□□□ -1.6
SGMS1-205ENST00000498514 DISC1Q9NRI5 854 aa5.06□□□□□ -1.6
SGMS1-205ENST00000498514 CCDC87Q9NVE4 849 aa5.06□□□□□ -1.6
SGMS1-205ENST00000498514 PCOLCE2Q9UKZ9 415 aa5.06□□□□□ -1.6
SGMS1-205ENST00000498514 SNX11Q9Y5W9 270 aa5.06□□□□□ -1.6
SGMS1-205ENST00000498514 ITIH2P19823 946 aa5.05□□□□□ -1.6
SGMS1-205ENST00000498514 HNRNPUQ00839 825 aaKnown RBP eCLIP5.05□□□□□ -1.6
SGMS1-205ENST00000498514 FKBP4Q02790 459 aaKnown RBP eCLIP5.05□□□□□ -1.6
SGMS1-205ENST00000498514 PTPN12Q05209 780 aaKnown RBP5.05□□□□□ -1.6
SGMS1-205ENST00000498514 SF3B2Q13435 895 aaKnown RBP5.05□□□□□ -1.6
SGMS1-205ENST00000498514 TTLL4Q14679 1199 aa5.05□□□□□ -1.6
SGMS1-205ENST00000498514 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
SGMS1-205ENST00000498514 SIAH1Q8IUQ4 282 aa5.05□□□□□ -1.6
SGMS1-205ENST00000498514 PRDM7Q9NQW5 492 aa5.05□□□□□ -1.6
SGMS1-205ENST00000498514 PRRG2O14669 202 aa5.04□□□□□ -1.6
SGMS1-205ENST00000498514 ZNF862O60290 1169 aa5.04□□□□□ -1.6
SGMS1-205ENST00000498514 NEFLP07196 543 aa5.04□□□□□ -1.6
SGMS1-205ENST00000498514 SSFA2P28290 1259 aa5.04□□□□□ -1.6
SGMS1-205ENST00000498514 ZP2Q05996 745 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms