RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 BSNDQ8WZ55 320 aa11.35□□□□□ -0.59
SNX13-212ENST00000498463 POP1Q99575 1024 aaKnown RBP11.35□□□□□ -0.59
SNX13-212ENST00000498463 CBX8Q9HC52 389 aa11.35□□□□□ -0.59
SNX13-212ENST00000498463 PLAAQ9Y263 795 aa11.35□□□□□ -0.59
SNX13-212ENST00000498463 A0A1W2PQH9 124 aa11.34□□□□□ -0.59
SNX13-212ENST00000498463 BNIP3LO60238 219 aa11.34□□□□□ -0.59
SNX13-212ENST00000498463 GRIN3BO60391 1043 aa11.34□□□□□ -0.59
SNX13-212ENST00000498463 ATE1O95260 518 aa11.34□□□□□ -0.59
SNX13-212ENST00000498463 CD33P20138 364 aa11.34□□□□□ -0.59
SNX13-212ENST00000498463 MRM1Q6IN84 353 aaKnown RBP11.34□□□□□ -0.59
SNX13-212ENST00000498463 KRT26Q7Z3Y9 468 aa11.34□□□□□ -0.59
SNX13-212ENST00000498463 TTC6Q86TZ1 520 aa11.34□□□□□ -0.59
SNX13-212ENST00000498463 DHX37Q8IY37 1157 aaKnown RBP11.34□□□□□ -0.59
SNX13-212ENST00000498463 JDP2Q8WYK2 163 aa11.34□□□□□ -0.59
SNX13-212ENST00000498463 ZNF669Q96BR6 464 aaPredicted RBP11.34□□□□□ -0.59
SNX13-212ENST00000498463 NUCKS1Q9H1E3 243 aaKnown RBP11.34□□□□□ -0.59
SNX13-212ENST00000498463 NDFIP2Q9NV92 336 aa11.34□□□□□ -0.59
SNX13-212ENST00000498463 ZBTB42B2RXF5 422 aa11.33□□□□□ -0.6
SNX13-212ENST00000498463 ARNTP27540 789 aa11.33□□□□□ -0.6
SNX13-212ENST00000498463 PTPN11Q06124 597 aaPredicted RBP11.33□□□□□ -0.6
SNX13-212ENST00000498463 ZNF423Q2M1K9 1284 aa11.33□□□□□ -0.6
SNX13-212ENST00000498463 HFE2Q6ZVN8 426 aa11.33□□□□□ -0.6
SNX13-212ENST00000498463 A0A0G2JS52 829 aa11.32□□□□□ -0.6
SNX13-212ENST00000498463 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.32□□□□□ -0.6
SNX13-212ENST00000498463 ODR4Q5SWX8 454 aa11.32□□□□□ -0.6
SNX13-212ENST00000498463 TRIM46Q7Z4K8 759 aa11.32□□□□□ -0.6
SNX13-212ENST00000498463 FERMT3Q86UX7 667 aa11.32□□□□□ -0.6
SNX13-212ENST00000498463 ABHD17AQ96GS6 310 aa11.32□□□□□ -0.6
SNX13-212ENST00000498463 IER2Q9BTL4 223 aa11.32□□□□□ -0.6
SNX13-212ENST00000498463 EMILIN2Q9BXX0 1053 aa11.32□□□□□ -0.6
SNX13-212ENST00000498463 ANTXR1Q9H6X2 564 aa11.32□□□□□ -0.6
SNX13-212ENST00000498463 UPK3BL1B0FP48 263 aa11.31□□□□□ -0.6
SNX13-212ENST00000498463 UPK3BL2E5RIL1 263 aa11.31□□□□□ -0.6
SNX13-212ENST00000498463 GHRHP01286 108 aa11.31□□□□□ -0.6
SNX13-212ENST00000498463 GUCY2CP25092 1073 aa11.31□□□□□ -0.6
SNX13-212ENST00000498463 ZNF252P-AS1Q0IIN9 211 aa11.31□□□□□ -0.6
SNX13-212ENST00000498463 VN1R5Q7Z5H4 357 aa11.31□□□□□ -0.6
SNX13-212ENST00000498463 ZSWIM2Q8NEG5 633 aa11.31□□□□□ -0.6
SNX13-212ENST00000498463 TM9SF2Q99805 663 aa11.31□□□□□ -0.6
SNX13-212ENST00000498463 MEIS3P2A8K0S8 358 aa11.3□□□□□ -0.6
SNX13-212ENST00000498463 SMNDC1O75940 238 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNX13-212ENST00000498463 NEUROD1Q13562 356 aa11.3□□□□□ -0.6
SNX13-212ENST00000498463 TMEM67Q5HYA8 995 aa11.3□□□□□ -0.6
SNX13-212ENST00000498463 ADAMTSL4Q6UY14 1074 aa11.3□□□□□ -0.6
SNX13-212ENST00000498463 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.3□□□□□ -0.6
SNX13-212ENST00000498463 PRPF38AQ8NAV1 312 aaKnown RBP11.3□□□□□ -0.6
SNX13-212ENST00000498463 HOMER2Q9NSB8 354 aa11.3□□□□□ -0.6
SNX13-212ENST00000498463 SOX13Q9UN79 622 aa11.3□□□□□ -0.6
SNX13-212ENST00000498463 EIF2AK2P19525 551 aaKnown RBP11.29□□□□□ -0.6
SNX13-212ENST00000498463 CEP135Q66GS9 1140 aa11.29□□□□□ -0.6
SNX13-212ENST00000498463 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
SNX13-212ENST00000498463 EEPD1Q7L9B9 569 aa11.29□□□□□ -0.6
SNX13-212ENST00000498463 FMNL3Q8IVF7 1028 aa11.29□□□□□ -0.6
SNX13-212ENST00000498463 TMEM40Q8WWA1 233 aa11.29□□□□□ -0.6
SNX13-212ENST00000498463 ZFP42Q96MM3 310 aa11.29□□□□□ -0.6
SNX13-212ENST00000498463 RBSNQ9H1K0 784 aa11.29□□□□□ -0.6
SNX13-212ENST00000498463 RIPOR2Q9Y4F9 1068 aa11.29□□□□□ -0.6
SNX13-212ENST00000498463 CNGA1P29973 690 aa11.28□□□□□ -0.6
SNX13-212ENST00000498463 CDKN1CP49918 316 aaPredicted RBP11.28□□□□□ -0.6
SNX13-212ENST00000498463 C21orf62-AS1Q17RA5 79 aa11.28□□□□□ -0.6
SNX13-212ENST00000498463 LRRFIP1Q32MZ4 808 aaKnown RBP11.28□□□□□ -0.6
SNX13-212ENST00000498463 PDZD3Q86UT5 571 aa11.28□□□□□ -0.6
SNX13-212ENST00000498463 CEP89Q96ST8 783 aa11.28□□□□□ -0.6
SNX13-212ENST00000498463 CCDC194A0A1B0GVG4 234 aa11.27□□□□□ -0.61
SNX13-212ENST00000498463 PLEKHD1A6NEE1 506 aa11.27□□□□□ -0.61
SNX13-212ENST00000498463 MAP4K4O95819 1239 aaPredicted RBP11.27□□□□□ -0.61
SNX13-212ENST00000498463 TM4SF20Q53R12 229 aa11.27□□□□□ -0.61
SNX13-212ENST00000498463 MPRIPQ6WCQ1 1025 aa11.27□□□□□ -0.61
SNX13-212ENST00000498463 JAMLQ86YT9 394 aa11.27□□□□□ -0.61
SNX13-212ENST00000498463 MFSD3Q96ES6 412 aa11.27□□□□□ -0.61
SNX13-212ENST00000498463 ATP8A1Q9Y2Q0 1164 aa11.27□□□□□ -0.61
SNX13-212ENST00000498463 H7C1W4 665 aa11.26□□□□□ -0.61
SNX13-212ENST00000498463 HTR3BO95264 441 aa11.26□□□□□ -0.61
SNX13-212ENST00000498463 FAM153BP0C7A2 387 aa11.26□□□□□ -0.61
SNX13-212ENST00000498463 HGSNATQ68CP4 663 aa11.26□□□□□ -0.61
SNX13-212ENST00000498463 TAB3Q8N5C8 712 aaPredicted RBP11.26□□□□□ -0.61
SNX13-212ENST00000498463 ZSCAN1Q8NBB4 408 aa11.26□□□□□ -0.61
SNX13-212ENST00000498463 FAM126AQ9BYI3 521 aaPredicted RBP11.26□□□□□ -0.61
SNX13-212ENST00000498463 IGFLR1Q9H665 355 aa11.26□□□□□ -0.61
SNX13-212ENST00000498463 DNAJB12Q9NXW2 375 aaKnown RBP11.26□□□□□ -0.61
SNX13-212ENST00000498463 ESRRAP11474 423 aaPredicted RBP11.25□□□□□ -0.61
SNX13-212ENST00000498463 PTPRAP18433 802 aa11.25□□□□□ -0.61
SNX13-212ENST00000498463 POU3F3P20264 500 aaPredicted RBP11.25□□□□□ -0.61
SNX13-212ENST00000498463 CDK8P49336 464 aa11.25□□□□□ -0.61
SNX13-212ENST00000498463 PCSK7Q16549 785 aa11.25□□□□□ -0.61
SNX13-212ENST00000498463 MAP1SQ66K74 1059 aaPredicted RBP11.25□□□□□ -0.61
SNX13-212ENST00000498463 THNSL2Q86YJ6 484 aa11.25□□□□□ -0.61
SNX13-212ENST00000498463 NIM1KQ8IY84 436 aa11.25□□□□□ -0.61
SNX13-212ENST00000498463 CHAC2Q8WUX2 184 aa11.25□□□□□ -0.61
SNX13-212ENST00000498463 NINJ1Q92982 152 aa11.25□□□□□ -0.61
SNX13-212ENST00000498463 PSMD1Q99460 953 aa11.25□□□□□ -0.61
SNX13-212ENST00000498463 SPATA9Q9BWV2 254 aa11.25□□□□□ -0.61
SNX13-212ENST00000498463 ATXN7L1Q9ULK2 861 aaPredicted RBP11.25□□□□□ -0.61
SNX13-212ENST00000498463 SLC12A7Q9Y666 1083 aa11.25□□□□□ -0.61
SNX13-212ENST00000498463 PRR36Q9H6K5 1346 aa11.25□□□□□ -0.61
SNX13-212ENST00000498463 KCNQ2O43526 872 aa11.24□□□□□ -0.61
SNX13-212ENST00000498463 ADCY3O60266 1144 aa11.24□□□□□ -0.61
SNX13-212ENST00000498463 SELPP16109 830 aa11.24□□□□□ -0.61
SNX13-212ENST00000498463 STAT3P40763 770 aa11.24□□□□□ -0.61
SNX13-212ENST00000498463 EVA1CP58658 441 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms