RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 KCNB2Q92953 911 aa19.1■□□□□ 0.65
PTK7-220ENST00000497957 NBPF3Q9H094 633 aa19.1■□□□□ 0.65
PTK7-220ENST00000497957 SUGT1Q9Y2Z0 365 aa19.1■□□□□ 0.65
PTK7-220ENST00000497957 U3KPZ7 1027 aaPredicted RBP19.1■□□□□ 0.65
PTK7-220ENST00000497957 CDK5RAP2Q96SN8 1893 aa19.09■□□□□ 0.65
PTK7-220ENST00000497957 CYP2D7A0A087X1C5 515 aa19.09■□□□□ 0.65
PTK7-220ENST00000497957 PATL2C9JE40 543 aaKnown RBP19.09■□□□□ 0.65
PTK7-220ENST00000497957 LDHCP07864 332 aa19.09■□□□□ 0.65
PTK7-220ENST00000497957 CYP21A2P08686 494 aa19.09■□□□□ 0.65
PTK7-220ENST00000497957 CPA1P15085 419 aa19.09■□□□□ 0.65
PTK7-220ENST00000497957 LMNB1P20700 586 aa19.09■□□□□ 0.65
PTK7-220ENST00000497957 PPP4CP60510 307 aa19.09■□□□□ 0.65
PTK7-220ENST00000497957 STOX1Q6ZVD7 989 aa19.09■□□□□ 0.65
PTK7-220ENST00000497957 IFNL3Q8IZI9 196 aa19.09■□□□□ 0.65
PTK7-220ENST00000497957 FAM163AQ96GL9 167 aaPredicted RBP19.09■□□□□ 0.65
PTK7-220ENST00000497957 GJA3Q9Y6H8 435 aa19.09■□□□□ 0.65
PTK7-220ENST00000497957 DICER1Q9UPY3 1922 aaKnown RBP19.09■□□□□ 0.65
PTK7-220ENST00000497957 TIAM2Q8IVF5 1701 aa19.08■□□□□ 0.65
PTK7-220ENST00000497957 CYP2D6P10635 497 aa19.08■□□□□ 0.64
PTK7-220ENST00000497957 SLC4A8Q2Y0W8 1093 aa19.08■□□□□ 0.64
PTK7-220ENST00000497957 APOBEC3HQ6NTF7 200 aaKnown RBP19.08■□□□□ 0.64
PTK7-220ENST00000497957 INCENPQ9NQS7 918 aa19.08■□□□□ 0.64
PTK7-220ENST00000497957 RNF181Q9P0P0 153 aa19.08■□□□□ 0.64
PTK7-220ENST00000497957 BAZ2AQ9UIF9 1905 aaKnown RBP19.08■□□□□ 0.64
PTK7-220ENST00000497957 CFAP100Q494V2 611 aa19.07■□□□□ 0.64
PTK7-220ENST00000497957 C9orf131Q5VYM1 1079 aa19.07■□□□□ 0.64
PTK7-220ENST00000497957 TEKT1Q969V4 418 aa19.07■□□□□ 0.64
PTK7-220ENST00000497957 EPB41L2O43491 1005 aaKnown RBP19.06■□□□□ 0.64
PTK7-220ENST00000497957 EIF5BO60841 1220 aaKnown RBP19.06■□□□□ 0.64
PTK7-220ENST00000497957 CD2BP2O95400 341 aaKnown RBP19.06■□□□□ 0.64
PTK7-220ENST00000497957 MCCP23508 829 aa19.06■□□□□ 0.64
PTK7-220ENST00000497957 GMPSP49915 693 aaPredicted RBP19.06■□□□□ 0.64
PTK7-220ENST00000497957 CACNB3P54284 484 aa19.06■□□□□ 0.64
PTK7-220ENST00000497957 CTDSPL2Q05D32 466 aa19.06■□□□□ 0.64
PTK7-220ENST00000497957 ALX1Q15699 326 aa19.06■□□□□ 0.64
PTK7-220ENST00000497957 CDC42EP5Q6NZY7 148 aa19.06■□□□□ 0.64
PTK7-220ENST00000497957 HHIPL2Q6UWX4 724 aa19.06■□□□□ 0.64
PTK7-220ENST00000497957 TBC1D10CQ8IV04 446 aa19.06■□□□□ 0.64
PTK7-220ENST00000497957 MAPKAPK5Q8IW41 473 aa19.06■□□□□ 0.64
PTK7-220ENST00000497957 STK11IPQ8N1F8 1099 aa19.06■□□□□ 0.64
PTK7-220ENST00000497957 TGFBRAP1Q8WUH2 860 aa19.06■□□□□ 0.64
PTK7-220ENST00000497957 CRNKL1Q9BZJ0 848 aaKnown RBP19.06■□□□□ 0.64
PTK7-220ENST00000497957 DDX4Q9NQI0 724 aaKnown RBP19.06■□□□□ 0.64
PTK7-220ENST00000497957 EGFRP00533 1210 aa19.05■□□□□ 0.64
PTK7-220ENST00000497957 USP17L8P0C7I0 530 aa19.05■□□□□ 0.64
PTK7-220ENST00000497957 RBM5P52756 815 aaKnown RBP eCLIP19.05■□□□□ 0.64
PTK7-220ENST00000497957 EIF6P56537 245 aaKnown RBP19.05■□□□□ 0.64
PTK7-220ENST00000497957 TEX11Q8IYF3 940 aa19.05■□□□□ 0.64
PTK7-220ENST00000497957 PRMT6Q96LA8 375 aaPredicted RBP19.05■□□□□ 0.64
PTK7-220ENST00000497957 ZDHHC15Q96MV8 337 aa19.05■□□□□ 0.64
PTK7-220ENST00000497957 UPF3BQ9BZI7 483 aaKnown RBP19.05■□□□□ 0.64
PTK7-220ENST00000497957 DCP1AQ9NPI6 582 aaPredicted RBP19.05■□□□□ 0.64
PTK7-220ENST00000497957 USP40Q9NVE5 1235 aa19.05■□□□□ 0.64
PTK7-220ENST00000497957 SAP30BPQ9UHR5 308 aaKnown RBP19.05■□□□□ 0.64
PTK7-220ENST00000497957 LAMA4Q16363 1823 aa19.04■□□□□ 0.64
PTK7-220ENST00000497957 IGSF3O75054 1194 aa19.04■□□□□ 0.64
PTK7-220ENST00000497957 GNAT2P19087 354 aa19.04■□□□□ 0.64
PTK7-220ENST00000497957 TDO2P48775 406 aa19.04■□□□□ 0.64
PTK7-220ENST00000497957 TNIP1Q15025 636 aa19.04■□□□□ 0.64
PTK7-220ENST00000497957 SLF2Q8IX21 1173 aa19.04■□□□□ 0.64
PTK7-220ENST00000497957 NAV1Q8NEY1 1877 aa19.04■□□□□ 0.64
PTK7-220ENST00000497957 IL17RAQ96F46 866 aa19.04■□□□□ 0.64
PTK7-220ENST00000497957 JAKMIP1Q96N16 626 aaKnown RBP19.04■□□□□ 0.64
PTK7-220ENST00000497957 NOL10Q9BSC4 688 aaKnown RBP19.04■□□□□ 0.64
PTK7-220ENST00000497957 NAPBQ9H115 298 aa19.04■□□□□ 0.64
PTK7-220ENST00000497957 MKRN1Q9UHC7 482 aaKnown RBP19.04■□□□□ 0.64
PTK7-220ENST00000497957 MYO3BQ8WXR4 1341 aa19.03■□□□□ 0.64
PTK7-220ENST00000497957 DDX60LQ5H9U9 1706 aaKnown RBP19.03■□□□□ 0.64
PTK7-220ENST00000497957 ECM29Q5VYK3 1845 aa19.03■□□□□ 0.64
PTK7-220ENST00000497957 WDHD1O75717 1129 aaPredicted RBP19.03■□□□□ 0.64
PTK7-220ENST00000497957 BAG3O95817 575 aa19.03■□□□□ 0.64
PTK7-220ENST00000497957 USP5P45974 858 aa19.03■□□□□ 0.64
PTK7-220ENST00000497957 NFIAQ12857 509 aa19.03■□□□□ 0.64
PTK7-220ENST00000497957 CTR9Q6PD62 1173 aa19.03■□□□□ 0.64
PTK7-220ENST00000497957 TMED8Q6PL24 325 aaPredicted RBP19.03■□□□□ 0.64
PTK7-220ENST00000497957 ZFPM1Q8IX07 1006 aa19.03■□□□□ 0.64
PTK7-220ENST00000497957 AGBL3Q8NEM8 1001 aa19.03■□□□□ 0.64
PTK7-220ENST00000497957 TDRD3Q9H7E2 651 aaKnown RBP19.03■□□□□ 0.64
PTK7-220ENST00000497957 SERPINA10Q9UK55 444 aa19.03■□□□□ 0.64
PTK7-220ENST00000497957 MINDY4BA8MYZ0 360 aa19.02■□□□□ 0.64
PTK7-220ENST00000497957 USP17L12C9JPN9 530 aa19.02■□□□□ 0.64
PTK7-220ENST00000497957 USP17L21D6R901 530 aa19.02■□□□□ 0.64
PTK7-220ENST00000497957 HDLBPQ00341 1268 aaKnown RBP19.02■□□□□ 0.64
PTK7-220ENST00000497957 PICALMQ13492 652 aa19.02■□□□□ 0.64
PTK7-220ENST00000497957 TCEANC2Q96MN5 208 aa19.02■□□□□ 0.64
PTK7-220ENST00000497957 RPAP1Q9BWH6 1393 aaPredicted RBP19.02■□□□□ 0.64
PTK7-220ENST00000497957 GOLGB1Q14789 3259 aaKnown RBP19.02■□□□□ 0.64
PTK7-220ENST00000497957 FOCADQ5VW36 1801 aa19.02■□□□□ 0.63
PTK7-220ENST00000497957 ASTN2O75129 1339 aaPredicted RBP19.01■□□□□ 0.63
PTK7-220ENST00000497957 FLT1P17948 1338 aa19.01■□□□□ 0.63
PTK7-220ENST00000497957 CLRN2A0PK11 232 aa19.01■□□□□ 0.63
PTK7-220ENST00000497957 E7EWF7 191 aa19.01■□□□□ 0.63
PTK7-220ENST00000497957 DDNO94850 711 aaPredicted RBP19.01■□□□□ 0.63
PTK7-220ENST00000497957 SLURP2P0DP57 97 aa19.01■□□□□ 0.63
PTK7-220ENST00000497957 ANAPC15P60006 121 aa19.01■□□□□ 0.63
PTK7-220ENST00000497957 RBM26Q5T8P6 1007 aaKnown RBP19.01■□□□□ 0.63
PTK7-220ENST00000497957 MICALL2Q8IY33 904 aa19.01■□□□□ 0.63
PTK7-220ENST00000497957 MRIQ9BWK5 157 aa19.01■□□□□ 0.63
PTK7-220ENST00000497957 CTNNA3Q9UI47 895 aa19.01■□□□□ 0.63
PTK7-220ENST00000497957 SCAF8Q9UPN6 1271 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms