RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 SASH1O94885 1247 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 ACTN3Q08043 901 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 KCTD16Q68DU8 428 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 MICU3Q86XE3 530 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 CCDC85AQ96PX6 553 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 DBNDD2Q9BQY9 259 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 NEBLO76041 1014 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 STOX1Q6ZVD7 989 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 SCLT1Q96NL6 688 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 ANKZF1Q9H8Y5 726 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 CTDNEP1O95476 244 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 A1BGP04217 495 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 TRHP20396 242 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 EIF5P55010 431 aaKnown RBP12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 RSRC2Q7L4I2 434 aaKnown RBP12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 KAT2BQ92831 832 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 HDAC6Q9UBN7 1215 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 TEX33O43247 280 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 PFKFB2O60825 505 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 SCP2P22307 547 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 MAP9Q49MG5 647 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 MCMDC2Q4G0Z9 681 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 BEND3Q5T5X7 828 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 JMYQ8N9B5 988 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 PHKBQ93100 1093 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 NAPGQ99747 312 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 LGR6Q9HBX8 967 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 TFR2Q9UP52 801 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 ADCY9O60503 1353 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 MYO1FO00160 1098 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 HNRNPH1P31943 449 aaKnown RBP12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 CDR1P51861 262 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 PDE4BQ07343 736 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 PROSER3Q2NL68 480 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 FILIP1LQ4L180 1135 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 RPAINQ86UA6 219 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 SMYD4Q8IYR2 804 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 JADE2Q9NQC1 790 aa12.08□□□□□ -0.48
TRAPPC12-223ENST00000497597 CPSF1Q10570 1443 aaKnown RBP12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 BTBD11A6QL63 1104 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 CASP1P29466 404 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 NF2P35240 595 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 TFCP2Q12800 502 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 E2F5Q15329 346 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 TSR1Q2NL82 804 aaKnown RBP12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 SND1Q7KZF4 910 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 ALG1Q9BT22 464 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 VPS16Q9H269 839 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 MAPK8IP1Q9UQF2 711 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 MLH3Q9UHC1 1453 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 STX10O60499 249 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 PDIA3P30101 505 aaKnown RBP12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 GGCXP38435 758 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 KIAA1328Q86T90 577 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 EEF2KMTQ96G04 330 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 PSD3Q9NYI0 1048 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 L1RE1Q9UN81 338 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 ACEP12821 1306 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 ZFYVE16Q7Z3T8 1539 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 DIP2CQ9Y2E4 1556 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 ATP5J2-PTCD1G3V325 749 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 N4BP3O15049 544 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 POLR2DO15514 142 aaKnown RBP12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 PTCD1O75127 700 aaKnown RBP12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 ABL1P00519 1130 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 CDC25AP30304 524 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 RBL2Q08999 1139 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 NEXNQ0ZGT2 675 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 MYL10Q9BUA6 226 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 KAT14Q9H8E8 782 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 RTEL1Q9NZ71 1219 aa12.07□□□□□ -0.48
TRAPPC12-223ENST00000497597 MAP3K5Q99683 1374 aa12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 PRAMEF22A3QJZ6 481 aa12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 EXOC5O00471 708 aa12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 GIGYF1O75420 1035 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 RAD9BQ6WBX8 426 aa12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 TC2NQ8N9U0 490 aa12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 CD248Q9HCU0 757 aa12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 KCNH3Q9ULD8 1083 aa12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 RPSAP08865 295 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 CASP14P31944 242 aa12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 NAP1L1P55209 391 aaKnown RBP12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 PDCLQ13371 301 aa12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 TRIM10Q9UDY6 481 aa12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 AATKQ6ZMQ8 1374 aa12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 CARMIL3Q8ND23 1372 aa12.06□□□□□ -0.48
TRAPPC12-223ENST00000497597 KIF28PB7ZC32 967 aa12.05□□□□□ -0.48
TRAPPC12-223ENST00000497597 BRD2P25440 801 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-223ENST00000497597 TIMM10P62072 90 aa12.05□□□□□ -0.48
TRAPPC12-223ENST00000497597 RRP12Q5JTH9 1297 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-223ENST00000497597 CCDC70Q6NSX1 233 aa12.05□□□□□ -0.48
TRAPPC12-223ENST00000497597 MYD88Q99836 296 aa12.05□□□□□ -0.48
TRAPPC12-223ENST00000497597 ESF1Q9H501 851 aaKnown RBP12.05□□□□□ -0.48
TRAPPC12-223ENST00000497597 KIF1BO60333 1816 aa12.05□□□□□ -0.48
TRAPPC12-223ENST00000497597 MROH7-TTC4A0A0A0MT08 1334 aa12.05□□□□□ -0.48
TRAPPC12-223ENST00000497597 GOLGA6BA6NDN3 693 aa12.05□□□□□ -0.48
TRAPPC12-223ENST00000497597 E7EWF7 191 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms