RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 FOCADQ5VW36 1801 aa17.02■□□□□ 0.31
VPS26A-209ENST00000497564 ASTN2O75129 1339 aaPredicted RBP17.01■□□□□ 0.31
VPS26A-209ENST00000497564 ZNF532Q9HCE3 1301 aa17.01■□□□□ 0.31
VPS26A-209ENST00000497564 HSPA4P34932 840 aa17.01■□□□□ 0.31
VPS26A-209ENST00000497564 ANAPC15P60006 121 aa17.01■□□□□ 0.31
VPS26A-209ENST00000497564 DACT2Q5SW24 774 aa17.01■□□□□ 0.31
VPS26A-209ENST00000497564 RBM26Q5T8P6 1007 aaKnown RBP17.01■□□□□ 0.31
VPS26A-209ENST00000497564 SPTY2D1Q68D10 685 aaPredicted RBP17.01■□□□□ 0.31
VPS26A-209ENST00000497564 GLIS2Q9BZE0 524 aaPredicted RBP17.01■□□□□ 0.31
VPS26A-209ENST00000497564 ECM29Q5VYK3 1845 aa17■□□□□ 0.31
VPS26A-209ENST00000497564 M0R2C6 588 aa17■□□□□ 0.31
VPS26A-209ENST00000497564 PTH1RQ03431 593 aa17■□□□□ 0.31
VPS26A-209ENST00000497564 SLFNL1Q499Z3 407 aa17■□□□□ 0.31
VPS26A-209ENST00000497564 ERICH6Q7L0X2 663 aa17■□□□□ 0.31
VPS26A-209ENST00000497564 MAGEB6Q8N7X4 407 aa17■□□□□ 0.31
VPS26A-209ENST00000497564 FBXW7Q969H0 707 aa17■□□□□ 0.31
VPS26A-209ENST00000497564 KIF2CQ99661 725 aa17■□□□□ 0.31
VPS26A-209ENST00000497564 DSCC1Q9BVC3 393 aa17■□□□□ 0.31
VPS26A-209ENST00000497564 CREBZFQ9NS37 354 aa17■□□□□ 0.31
VPS26A-209ENST00000497564 ABCF2Q9UG63 623 aa17■□□□□ 0.31
VPS26A-209ENST00000497564 PGAP2Q9UHJ9 254 aa17■□□□□ 0.31
VPS26A-209ENST00000497564 CHAF1AQ13111 956 aaPredicted RBP16.99■□□□□ 0.31
VPS26A-209ENST00000497564 CCDC129Q6ZRS4 1044 aa16.99■□□□□ 0.31
VPS26A-209ENST00000497564 TBC1D22AQ8WUA7 517 aa16.99■□□□□ 0.31
VPS26A-209ENST00000497564 KCNB2Q92953 911 aa16.99■□□□□ 0.31
VPS26A-209ENST00000497564 PUS7LQ9H0K6 701 aaKnown RBP16.99■□□□□ 0.31
VPS26A-209ENST00000497564 MKRN1Q9UHC7 482 aaKnown RBP16.99■□□□□ 0.31
VPS26A-209ENST00000497564 BAZ2AQ9UIF9 1905 aaKnown RBP16.99■□□□□ 0.31
VPS26A-209ENST00000497564 LAMB1P07942 1786 aa16.98■□□□□ 0.31
VPS26A-209ENST00000497564 ZNF280AP59817 542 aaPredicted RBP16.98■□□□□ 0.31
VPS26A-209ENST00000497564 GTF2IP78347 998 aa16.98■□□□□ 0.31
VPS26A-209ENST00000497564 NECTIN1Q15223 517 aa16.98■□□□□ 0.31
VPS26A-209ENST00000497564 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
VPS26A-209ENST00000497564 AGBL3Q8NEM8 1001 aa16.98■□□□□ 0.31
VPS26A-209ENST00000497564 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
VPS26A-209ENST00000497564 RAI14Q9P0K7 980 aa16.98■□□□□ 0.31
VPS26A-209ENST00000497564 JAG2Q9Y219 1238 aa16.98■□□□□ 0.31
VPS26A-209ENST00000497564 SUGT1Q9Y2Z0 365 aa16.98■□□□□ 0.31
VPS26A-209ENST00000497564 POLR2AP24928 1970 aaKnown RBP16.98■□□□□ 0.31
VPS26A-209ENST00000497564 TMEM88BA6NKF7 163 aa16.97■□□□□ 0.31
VPS26A-209ENST00000497564 GPAA1O43292 621 aa16.97■□□□□ 0.31
VPS26A-209ENST00000497564 STRIP1Q5VSL9 837 aa16.97■□□□□ 0.31
VPS26A-209ENST00000497564 CST9Q5W186 159 aa16.97■□□□□ 0.31
VPS26A-209ENST00000497564 TTLL5Q6EMB2 1281 aa16.97■□□□□ 0.31
VPS26A-209ENST00000497564 IL27Q8NEV9 243 aa16.97■□□□□ 0.31
VPS26A-209ENST00000497564 ZC3H15Q8WU90 426 aaKnown RBP16.97■□□□□ 0.31
VPS26A-209ENST00000497564 DDRGK1Q96HY6 314 aa16.97■□□□□ 0.31
VPS26A-209ENST00000497564 RBM8AQ9Y5S9 174 aaKnown RBP16.97■□□□□ 0.31
VPS26A-209ENST00000497564 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
VPS26A-209ENST00000497564 NAV1Q8NEY1 1877 aa16.97■□□□□ 0.31
VPS26A-209ENST00000497564 LDHBP07195 334 aaKnown RBP16.96■□□□□ 0.31
VPS26A-209ENST00000497564 USP17L8P0C7I0 530 aa16.96■□□□□ 0.31
VPS26A-209ENST00000497564 HSPD1P10809 573 aaKnown RBP16.96■□□□□ 0.31
VPS26A-209ENST00000497564 CYP7A1P22680 504 aa16.96■□□□□ 0.31
VPS26A-209ENST00000497564 PRDX5P30044 214 aa16.96■□□□□ 0.31
VPS26A-209ENST00000497564 FKBP1AP62942 108 aaKnown RBP16.96■□□□□ 0.31
VPS26A-209ENST00000497564 MECOMQ03112 1051 aa16.96■□□□□ 0.31
VPS26A-209ENST00000497564 NAA16Q6N069 864 aaPredicted RBP16.96■□□□□ 0.31
VPS26A-209ENST00000497564 USP48Q86UV5 1035 aa16.96■□□□□ 0.31
VPS26A-209ENST00000497564 CERS5Q8N5B7 392 aa16.96■□□□□ 0.31
VPS26A-209ENST00000497564 ZNF384Q8TF68 577 aa16.96■□□□□ 0.31
VPS26A-209ENST00000497564 ZMYM6O95789 1325 aa16.96■□□□□ 0.3
VPS26A-209ENST00000497564 RPAP1Q9BWH6 1393 aaPredicted RBP16.95■□□□□ 0.3
VPS26A-209ENST00000497564 ADM5C9JUS6 153 aa16.95■□□□□ 0.3
VPS26A-209ENST00000497564 RABEP1Q15276 862 aa16.95■□□□□ 0.3
VPS26A-209ENST00000497564 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
VPS26A-209ENST00000497564 AIDAQ96BJ3 306 aa16.95■□□□□ 0.3
VPS26A-209ENST00000497564 STRBPQ96SI9 672 aaKnown RBP16.95■□□□□ 0.3
VPS26A-209ENST00000497564 PALD1Q9ULE6 856 aa16.95■□□□□ 0.3
VPS26A-209ENST00000497564 SCAF8Q9UPN6 1271 aaKnown RBP16.95■□□□□ 0.3
VPS26A-209ENST00000497564 TRPM7Q96QT4 1865 aa16.95■□□□□ 0.3
VPS26A-209ENST00000497564 MYH1P12882 1939 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 CNTNAP1P78357 1384 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 FOXP2O15409 715 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 GNAT2P19087 354 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 GSTO1P78417 241 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 TSGA10IPQ3SY00 556 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 MFSD14BQ5SR56 506 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 VPS53Q5VIR6 699 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 RNF20Q5VTR2 975 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 CREB3L3Q68CJ9 461 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 DZIP1Q86YF9 867 aaKnown RBP16.94■□□□□ 0.3
VPS26A-209ENST00000497564 KIAA0825Q8IV33 1275 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 MYOZ2Q9NPC6 264 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 GGA3Q9NZ52 723 aa16.94■□□□□ 0.3
VPS26A-209ENST00000497564 DDX60LQ5H9U9 1706 aaKnown RBP16.93■□□□□ 0.3
VPS26A-209ENST00000497564 SLC27A2O14975 620 aa16.93■□□□□ 0.3
VPS26A-209ENST00000497564 MBD4O95243 580 aa16.93■□□□□ 0.3
VPS26A-209ENST00000497564 ALX1Q15699 326 aa16.93■□□□□ 0.3
VPS26A-209ENST00000497564 NBPF9Q3BBW0 867 aa16.93■□□□□ 0.3
VPS26A-209ENST00000497564 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
VPS26A-209ENST00000497564 ADGRA1Q86SQ6 560 aa16.93■□□□□ 0.3
VPS26A-209ENST00000497564 RIOK1Q9BRS2 568 aaKnown RBP16.93■□□□□ 0.3
VPS26A-209ENST00000497564 SNX14Q9Y5W7 946 aa16.93■□□□□ 0.3
VPS26A-209ENST00000497564 MAGEB6P1A0A0J9YX57 407 aa16.92■□□□□ 0.3
VPS26A-209ENST00000497564 CELF2O95319 508 aaKnown RBP16.92■□□□□ 0.3
VPS26A-209ENST00000497564 LDHCP07864 332 aa16.92■□□□□ 0.3
VPS26A-209ENST00000497564 GRIK5Q16478 980 aa16.92■□□□□ 0.3
VPS26A-209ENST00000497564 ANGEL2Q5VTE6 544 aaKnown RBP16.92■□□□□ 0.3
VPS26A-209ENST00000497564 CDC37L1Q7L3B6 337 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms