RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 PUS7LQ9H0K6 701 aaKnown RBP23.72■■□□□ 1.39
SCAMP3-209ENST00000497470 TAOK2Q9UL54 1235 aa23.72■■□□□ 1.39
SCAMP3-209ENST00000497470 MYO1BO43795 1136 aa23.71■■□□□ 1.39
SCAMP3-209ENST00000497470 RHBDL3P58872 404 aa23.71■■□□□ 1.39
SCAMP3-209ENST00000497470 ADGRA1Q86SQ6 560 aa23.71■■□□□ 1.39
SCAMP3-209ENST00000497470 PNMA8AQ86V59 439 aaPredicted RBP23.71■■□□□ 1.39
SCAMP3-209ENST00000497470 STRBPQ96SI9 672 aaKnown RBP23.71■■□□□ 1.39
SCAMP3-209ENST00000497470 ESYT1Q9BSJ8 1104 aa23.71■■□□□ 1.39
SCAMP3-209ENST00000497470 IDI2Q9BXS1 227 aa23.71■■□□□ 1.39
SCAMP3-209ENST00000497470 CCDC171Q6TFL3 1326 aa23.7■■□□□ 1.38
SCAMP3-209ENST00000497470 A0A0D9SFI3 127 aa23.7■■□□□ 1.38
SCAMP3-209ENST00000497470 GPAA1O43292 621 aa23.7■■□□□ 1.38
SCAMP3-209ENST00000497470 BTDP43251 543 aa23.7■■□□□ 1.38
SCAMP3-209ENST00000497470 CWC27Q6UX04 472 aaKnown RBP23.7■■□□□ 1.38
SCAMP3-209ENST00000497470 FAM227BQ96M60 508 aa23.7■■□□□ 1.38
SCAMP3-209ENST00000497470 CRNKL1Q9BZJ0 848 aaKnown RBP23.7■■□□□ 1.38
SCAMP3-209ENST00000497470 ATP8A2Q9NTI2 1148 aa23.7■■□□□ 1.38
SCAMP3-209ENST00000497470 ZMYM6O95789 1325 aa23.69■■□□□ 1.38
SCAMP3-209ENST00000497470 PITPNM2Q9BZ72 1349 aa23.69■■□□□ 1.38
SCAMP3-209ENST00000497470 WNT10BO00744 389 aa23.69■■□□□ 1.38
SCAMP3-209ENST00000497470 VEGFAP15692 232 aaPredicted RBP23.69■■□□□ 1.38
SCAMP3-209ENST00000497470 ALX1Q15699 326 aa23.69■■□□□ 1.38
SCAMP3-209ENST00000497470 KIF4BQ2VIQ3 1234 aa23.69■■□□□ 1.38
SCAMP3-209ENST00000497470 PRMT6Q96LA8 375 aaPredicted RBP23.69■■□□□ 1.38
SCAMP3-209ENST00000497470 PGAP2Q9UHJ9 254 aa23.69■■□□□ 1.38
SCAMP3-209ENST00000497470 REC8O95072 547 aa23.68■■□□□ 1.38
SCAMP3-209ENST00000497470 EPS15P42566 896 aa23.68■■□□□ 1.38
SCAMP3-209ENST00000497470 SPDYE2Q495Y8 402 aa23.68■■□□□ 1.38
SCAMP3-209ENST00000497470 DSCC1Q9BVC3 393 aa23.68■■□□□ 1.38
SCAMP3-209ENST00000497470 POTECB2RU33 542 aa23.67■■□□□ 1.38
SCAMP3-209ENST00000497470 MBD4O95243 580 aa23.67■■□□□ 1.38
SCAMP3-209ENST00000497470 RBM5P52756 815 aaKnown RBP eCLIP23.67■■□□□ 1.38
SCAMP3-209ENST00000497470 CDC42EP5Q6NZY7 148 aa23.67■■□□□ 1.38
SCAMP3-209ENST00000497470 AATFQ9NY61 560 aaKnown RBP eCLIP23.67■■□□□ 1.38
SCAMP3-209ENST00000497470 PATL2C9JE40 543 aaKnown RBP23.66■■□□□ 1.38
SCAMP3-209ENST00000497470 M0R2C6 588 aa23.66■■□□□ 1.38
SCAMP3-209ENST00000497470 ENTPD3O75355 529 aa23.66■■□□□ 1.38
SCAMP3-209ENST00000497470 EPHX2P34913 555 aa23.66■■□□□ 1.38
SCAMP3-209ENST00000497470 TNFAIP1Q13829 316 aa23.66■■□□□ 1.38
SCAMP3-209ENST00000497470 C8orf34Q49A92 452 aa23.66■■□□□ 1.38
SCAMP3-209ENST00000497470 FAM83AQ86UY5 434 aa23.66■■□□□ 1.38
SCAMP3-209ENST00000497470 TAF1DQ9H5J8 278 aaPredicted RBP23.66■■□□□ 1.38
SCAMP3-209ENST00000497470 USP40Q9NVE5 1235 aa23.66■■□□□ 1.38
SCAMP3-209ENST00000497470 TMOD2Q9NZR1 351 aa23.66■■□□□ 1.38
SCAMP3-209ENST00000497470 MKRN1Q9UHC7 482 aaKnown RBP23.66■■□□□ 1.38
SCAMP3-209ENST00000497470 COL2A1P02458 1487 aaPredicted RBP23.66■■□□□ 1.38
SCAMP3-209ENST00000497470 CHGBP05060 677 aa23.65■■□□□ 1.38
SCAMP3-209ENST00000497470 KIAA1211Q6ZU35 1233 aa23.65■■□□□ 1.38
SCAMP3-209ENST00000497470 LCORLQ8N3X6 602 aa23.65■■□□□ 1.38
SCAMP3-209ENST00000497470 MIGA1Q8NAN2 632 aa23.65■■□□□ 1.38
SCAMP3-209ENST00000497470 SEC62Q99442 399 aaKnown RBP23.65■■□□□ 1.38
SCAMP3-209ENST00000497470 ECM29Q5VYK3 1845 aa23.65■■□□□ 1.38
SCAMP3-209ENST00000497470 SAMD7Q7Z3H4 446 aa23.64■■□□□ 1.37
SCAMP3-209ENST00000497470 DDRGK1Q96HY6 314 aa23.64■■□□□ 1.37
SCAMP3-209ENST00000497470 NACAP1Q9BZK3 213 aa23.64■■□□□ 1.37
SCAMP3-209ENST00000497470 ZNF70Q9UC06 446 aaPredicted RBP23.64■■□□□ 1.37
SCAMP3-209ENST00000497470 WDHD1O75717 1129 aaPredicted RBP23.63■■□□□ 1.37
SCAMP3-209ENST00000497470 DYNLL1P63167 89 aaKnown RBP23.63■■□□□ 1.37
SCAMP3-209ENST00000497470 SLFNL1Q499Z3 407 aa23.63■■□□□ 1.37
SCAMP3-209ENST00000497470 ZNF589Q86UQ0 364 aaPredicted RBP23.63■■□□□ 1.37
SCAMP3-209ENST00000497470 APOBEC3FQ8IUX4 373 aaKnown RBP23.63■■□□□ 1.37
SCAMP3-209ENST00000497470 TEX11Q8IYF3 940 aa23.63■■□□□ 1.37
SCAMP3-209ENST00000497470 ARMT1Q9H993 441 aa23.63■■□□□ 1.37
SCAMP3-209ENST00000497470 PPP2R3BQ9Y5P8 575 aa23.63■■□□□ 1.37
SCAMP3-209ENST00000497470 GSG1L2A8MUP6 293 aa23.62■■□□□ 1.37
SCAMP3-209ENST00000497470 HSPD1P10809 573 aaKnown RBP23.62■■□□□ 1.37
SCAMP3-209ENST00000497470 NBPF9Q3BBW0 867 aa23.62■■□□□ 1.37
SCAMP3-209ENST00000497470 TBC1D10BQ4KMP7 808 aaPredicted RBP23.62■■□□□ 1.37
SCAMP3-209ENST00000497470 SH3RF3Q8TEJ3 882 aaPredicted RBP23.62■■□□□ 1.37
SCAMP3-209ENST00000497470 MAP4K1Q92918 833 aa23.62■■□□□ 1.37
SCAMP3-209ENST00000497470 DHX36Q9H2U1 1008 aaKnown RBP23.62■■□□□ 1.37
SCAMP3-209ENST00000497470 TDRD3Q9H7E2 651 aaKnown RBP23.62■■□□□ 1.37
SCAMP3-209ENST00000497470 CTNNA3Q9UI47 895 aa23.62■■□□□ 1.37
SCAMP3-209ENST00000497470 SHTN1A0MZ66 631 aa23.61■■□□□ 1.37
SCAMP3-209ENST00000497470 TNNI2P48788 182 aa23.61■■□□□ 1.37
SCAMP3-209ENST00000497470 NT5C2P49902 561 aa23.61■■□□□ 1.37
SCAMP3-209ENST00000497470 HIRAP54198 1017 aaPredicted RBP23.61■■□□□ 1.37
SCAMP3-209ENST00000497470 SBK1Q52WX2 424 aa23.61■■□□□ 1.37
SCAMP3-209ENST00000497470 TRPM4Q8TD43 1214 aa23.61■■□□□ 1.37
SCAMP3-209ENST00000497470 DCP1AQ9NPI6 582 aaPredicted RBP23.61■■□□□ 1.37
SCAMP3-209ENST00000497470 SLC4A4Q9Y6R1 1079 aa23.61■■□□□ 1.37
SCAMP3-209ENST00000497470 ATRNL1Q5VV63 1379 aa23.61■■□□□ 1.37
SCAMP3-209ENST00000497470 FAM151AQ8WW52 585 aa23.6■■□□□ 1.37
SCAMP3-209ENST00000497470 LSG1Q9H089 658 aaKnown RBP23.6■■□□□ 1.37
SCAMP3-209ENST00000497470 IL25Q9H293 177 aa23.6■■□□□ 1.37
SCAMP3-209ENST00000497470 FOCADQ5VW36 1801 aa23.6■■□□□ 1.37
SCAMP3-209ENST00000497470 UTRNP46939 3433 aa23.6■■□□□ 1.37
SCAMP3-209ENST00000497470 EGFRP00533 1210 aa23.59■■□□□ 1.37
SCAMP3-209ENST00000497470 IFNL3Q8IZI9 196 aa23.59■■□□□ 1.37
SCAMP3-209ENST00000497470 BACH2Q9BYV9 841 aa23.59■■□□□ 1.37
SCAMP3-209ENST00000497470 ARPP21Q9UBL0 812 aaPredicted RBP23.59■■□□□ 1.37
SCAMP3-209ENST00000497470 U3KPZ7 1027 aaPredicted RBP23.59■■□□□ 1.37
SCAMP3-209ENST00000497470 FOXP2O15409 715 aa23.58■■□□□ 1.37
SCAMP3-209ENST00000497470 USP5P45974 858 aa23.58■■□□□ 1.37
SCAMP3-209ENST00000497470 CCDC129Q6ZRS4 1044 aa23.58■■□□□ 1.37
SCAMP3-209ENST00000497470 TGFBRAP1Q8WUH2 860 aa23.58■■□□□ 1.37
SCAMP3-209ENST00000497470 PCDHAC2Q9Y5I4 1007 aa23.58■■□□□ 1.37
SCAMP3-209ENST00000497470 FLT1P17948 1338 aa23.58■■□□□ 1.36
SCAMP3-209ENST00000497470 PCP11498 1178 aaKnown RBP23.57■■□□□ 1.36
SCAMP3-209ENST00000497470 RBM26Q5T8P6 1007 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms