RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 MCMDC2Q4G0Z9 681 aa13.18□□□□□ -0.3
CCDC142-209ENST00000497232 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
CCDC142-209ENST00000497232 CCDC129Q6ZRS4 1044 aa13.18□□□□□ -0.3
CCDC142-209ENST00000497232 DZIP1Q86YF9 867 aaKnown RBP13.18□□□□□ -0.3
CCDC142-209ENST00000497232 LCORLQ8N3X6 602 aa13.18□□□□□ -0.3
CCDC142-209ENST00000497232 CDK5RAP2Q96SN8 1893 aa13.18□□□□□ -0.3
CCDC142-209ENST00000497232 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
CCDC142-209ENST00000497232 GPAA1O43292 621 aa13.17□□□□□ -0.3
CCDC142-209ENST00000497232 SPDYE6P0CI01 402 aa13.17□□□□□ -0.3
CCDC142-209ENST00000497232 EPS15P42566 896 aa13.17□□□□□ -0.3
CCDC142-209ENST00000497232 HIRAP54198 1017 aaPredicted RBP13.17□□□□□ -0.3
CCDC142-209ENST00000497232 GSTO1P78417 241 aa13.17□□□□□ -0.3
CCDC142-209ENST00000497232 LRRFIP1Q32MZ4 808 aaKnown RBP13.17□□□□□ -0.3
CCDC142-209ENST00000497232 CFAP100Q494V2 611 aa13.17□□□□□ -0.3
CCDC142-209ENST00000497232 VPS53Q5VIR6 699 aa13.17□□□□□ -0.3
CCDC142-209ENST00000497232 PRMT6Q96LA8 375 aaPredicted RBP13.17□□□□□ -0.3
CCDC142-209ENST00000497232 BACH2Q9BYV9 841 aa13.17□□□□□ -0.3
CCDC142-209ENST00000497232 LSG1Q9H089 658 aaKnown RBP13.17□□□□□ -0.3
CCDC142-209ENST00000497232 DIAPH3Q9NSV4 1193 aa13.17□□□□□ -0.3
CCDC142-209ENST00000497232 CNOT7Q9UIV1 285 aaKnown RBP13.17□□□□□ -0.3
CCDC142-209ENST00000497232 GJA3Q9Y6H8 435 aa13.17□□□□□ -0.3
CCDC142-209ENST00000497232 FOCADQ5VW36 1801 aa13.16□□□□□ -0.3
CCDC142-209ENST00000497232 LDHCP07864 332 aa13.16□□□□□ -0.3
CCDC142-209ENST00000497232 BTDP43251 543 aa13.16□□□□□ -0.3
CCDC142-209ENST00000497232 MICALL2Q8IY33 904 aa13.16□□□□□ -0.3
CCDC142-209ENST00000497232 MIGA1Q8NAN2 632 aa13.16□□□□□ -0.3
CCDC142-209ENST00000497232 TEKT1Q969V4 418 aa13.16□□□□□ -0.3
CCDC142-209ENST00000497232 ARMT1Q9H993 441 aa13.16□□□□□ -0.3
CCDC142-209ENST00000497232 MYOZ2Q9NPC6 264 aa13.16□□□□□ -0.3
CCDC142-209ENST00000497232 DDX60LQ5H9U9 1706 aaKnown RBP13.16□□□□□ -0.3
CCDC142-209ENST00000497232 ECM29Q5VYK3 1845 aa13.16□□□□□ -0.3
CCDC142-209ENST00000497232 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
CCDC142-209ENST00000497232 GSG1L2A8MUP6 293 aa13.15□□□□□ -0.3
CCDC142-209ENST00000497232 WNT10BO00744 389 aa13.15□□□□□ -0.3
CCDC142-209ENST00000497232 PRKAB2O43741 272 aa13.15□□□□□ -0.3
CCDC142-209ENST00000497232 WDHD1O75717 1129 aaPredicted RBP13.15□□□□□ -0.3
CCDC142-209ENST00000497232 MBD4O95243 580 aa13.15□□□□□ -0.3
CCDC142-209ENST00000497232 ATXN8OSP0DMR3 200 aa13.15□□□□□ -0.3
CCDC142-209ENST00000497232 PTH1RQ03431 593 aa13.15□□□□□ -0.3
CCDC142-209ENST00000497232 CDC42EP5Q6NZY7 148 aa13.15□□□□□ -0.3
CCDC142-209ENST00000497232 SLF2Q8IX21 1173 aa13.15□□□□□ -0.3
CCDC142-209ENST00000497232 TRPM4Q8TD43 1214 aa13.15□□□□□ -0.3
CCDC142-209ENST00000497232 SH3RF3Q8TEJ3 882 aaPredicted RBP13.15□□□□□ -0.3
CCDC142-209ENST00000497232 EPB41L4AQ9HCS5 686 aaPredicted RBP13.15□□□□□ -0.3
CCDC142-209ENST00000497232 AATFQ9NY61 560 aaKnown RBP eCLIP13.15□□□□□ -0.3
CCDC142-209ENST00000497232 SCN4AP35499 1836 aa13.14□□□□□ -0.31
CCDC142-209ENST00000497232 MAGEB6P1A0A0J9YX57 407 aa13.14□□□□□ -0.31
CCDC142-209ENST00000497232 HSPD1P10809 573 aaKnown RBP13.14□□□□□ -0.31
CCDC142-209ENST00000497232 NBPF9Q3BBW0 867 aa13.14□□□□□ -0.31
CCDC142-209ENST00000497232 SAMD7Q7Z3H4 446 aa13.14□□□□□ -0.31
CCDC142-209ENST00000497232 RUFY2Q8WXA3 655 aa13.14□□□□□ -0.31
CCDC142-209ENST00000497232 MAP4K1Q92918 833 aa13.14□□□□□ -0.31
CCDC142-209ENST00000497232 IDI2Q9BXS1 227 aa13.14□□□□□ -0.31
CCDC142-209ENST00000497232 DDX4Q9NQI0 724 aaKnown RBP13.14□□□□□ -0.31
CCDC142-209ENST00000497232 PGAP2Q9UHJ9 254 aa13.14□□□□□ -0.31
CCDC142-209ENST00000497232 RPAP1Q9BWH6 1393 aaPredicted RBP13.14□□□□□ -0.31
CCDC142-209ENST00000497232 ASTN2O75129 1339 aaPredicted RBP13.13□□□□□ -0.31
CCDC142-209ENST00000497232 EPB41L2O43491 1005 aaKnown RBP13.13□□□□□ -0.31
CCDC142-209ENST00000497232 ALX1Q15699 326 aa13.13□□□□□ -0.31
CCDC142-209ENST00000497232 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
CCDC142-209ENST00000497232 DPY19L2Q6NUT2 758 aa13.13□□□□□ -0.31
CCDC142-209ENST00000497232 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
CCDC142-209ENST00000497232 DSCC1Q9BVC3 393 aa13.13□□□□□ -0.31
CCDC142-209ENST00000497232 USP26Q9BXU7 913 aa13.13□□□□□ -0.31
CCDC142-209ENST00000497232 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
CCDC142-209ENST00000497232 ZMYM6O95789 1325 aa13.13□□□□□ -0.31
CCDC142-209ENST00000497232 CNTNAP1P78357 1384 aa13.12□□□□□ -0.31
CCDC142-209ENST00000497232 PATL2C9JE40 543 aaKnown RBP13.12□□□□□ -0.31
CCDC142-209ENST00000497232 BAG3O95817 575 aa13.12□□□□□ -0.31
CCDC142-209ENST00000497232 NFIAQ12857 509 aa13.12□□□□□ -0.31
CCDC142-209ENST00000497232 DLGAP5Q15398 846 aa13.12□□□□□ -0.31
CCDC142-209ENST00000497232 TBC1D10BQ4KMP7 808 aaPredicted RBP13.12□□□□□ -0.31
CCDC142-209ENST00000497232 CERS3Q8IU89 383 aa13.12□□□□□ -0.31
CCDC142-209ENST00000497232 KCNB2Q92953 911 aa13.12□□□□□ -0.31
CCDC142-209ENST00000497232 AIDAQ96BJ3 306 aa13.12□□□□□ -0.31
CCDC142-209ENST00000497232 IL17RAQ96F46 866 aa13.12□□□□□ -0.31
CCDC142-209ENST00000497232 TDRD3Q9H7E2 651 aaKnown RBP13.12□□□□□ -0.31
CCDC142-209ENST00000497232 ZNF70Q9UC06 446 aaPredicted RBP13.12□□□□□ -0.31
CCDC142-209ENST00000497232 FAM198AQ9UFP1 575 aa13.12□□□□□ -0.31
CCDC142-209ENST00000497232 GNAT2P19087 354 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 NECTIN1Q15223 517 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 KIF4BQ2VIQ3 1234 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 FKBP1CQ5VVH2 108 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 GIMAP6Q6P9H5 292 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 SH3BP5LQ7L8J4 393 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 ZFPM1Q8IX07 1006 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 IFNL3Q8IZI9 196 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 SDR42E1Q8WUS8 393 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 NBPF3Q9H094 633 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
CCDC142-209ENST00000497232 DCP1AQ9NPI6 582 aaPredicted RBP13.11□□□□□ -0.31
CCDC142-209ENST00000497232 ADARB2Q9NS39 739 aaKnown RBP13.11□□□□□ -0.31
CCDC142-209ENST00000497232 USP40Q9NVE5 1235 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 TACC3Q9Y6A5 838 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 SIPA1L1O43166 1804 aa13.11□□□□□ -0.31
CCDC142-209ENST00000497232 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
CCDC142-209ENST00000497232 H7C1D1 291 aa13.1□□□□□ -0.31
CCDC142-209ENST00000497232 SMIM22K7EJ46 135 aa13.1□□□□□ -0.31
CCDC142-209ENST00000497232 FGAP02671 866 aa13.1□□□□□ -0.31
CCDC142-209ENST00000497232 PLCG2P16885 1265 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms