RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 CD209Q9NNX6 404 aa7.45□□□□□ -1.22
HMGCL-206ENST00000496907 SAGE1Q9NXZ1 904 aa7.45□□□□□ -1.22
HMGCL-206ENST00000496907 RBM27Q9P2N5 1060 aaKnown RBP7.45□□□□□ -1.22
HMGCL-206ENST00000496907 DENND2AQ9ULE3 1009 aa7.45□□□□□ -1.22
HMGCL-206ENST00000496907 PA2G4Q9UQ80 394 aaKnown RBP7.45□□□□□ -1.22
HMGCL-206ENST00000496907 A0A1B0GUL7 405 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 RIMBP2O15034 1052 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 IFIT2P09913 472 aaKnown RBP7.44□□□□□ -1.22
HMGCL-206ENST00000496907 IL1R1P14778 569 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 KIF23Q02241 960 aaPredicted RBP7.44□□□□□ -1.22
HMGCL-206ENST00000496907 TFCP2Q12800 502 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 TNNI3KQ59H18 835 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 SPTY2D1Q68D10 685 aaPredicted RBP7.44□□□□□ -1.22
HMGCL-206ENST00000496907 TTLL5Q6EMB2 1281 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 RGMBQ6NW40 437 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 USP48Q86UV5 1035 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 SLC51AQ86UW1 340 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 TICAM2Q86XR7 235 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 SIRT2Q8IXJ6 389 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 OGFOD1Q8N543 542 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 AGBL3Q8NEM8 1001 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 HELBQ8NG08 1087 aaPredicted RBP7.44□□□□□ -1.22
HMGCL-206ENST00000496907 TDRD7Q8NHU6 1098 aaKnown RBP7.44□□□□□ -1.22
HMGCL-206ENST00000496907 KLHDC4Q8TBB5 520 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 FAM84BQ96KN1 310 aaPredicted RBP7.44□□□□□ -1.22
HMGCL-206ENST00000496907 NEUROD6Q96NK8 337 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 MRIQ9BWK5 157 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 RNF186Q9NXI6 227 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 HCSTQ9UBK5 93 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 HDAC9Q9UKV0 1011 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 PCDHB15Q9Y5E8 787 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 FPGT-TNNI3KV9GXZ4 949 aa7.44□□□□□ -1.22
HMGCL-206ENST00000496907 LAMB2P55268 1798 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 H7C1D1 291 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 ECE2O60344 883 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 RAD17O75943 681 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 VIL1P09327 827 aaKnown RBP7.43□□□□□ -1.22
HMGCL-206ENST00000496907 PLA2G5P39877 138 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 ZNF157P51786 506 aaPredicted RBP7.43□□□□□ -1.22
HMGCL-206ENST00000496907 TIMM10P62072 90 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 CXCL9Q07325 125 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 LRRFIP1Q32MZ4 808 aaKnown RBP7.43□□□□□ -1.22
HMGCL-206ENST00000496907 DLK2Q6UY11 383 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 SLF2Q8IX21 1173 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 C2orf69Q8N8R5 385 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 TRPM4Q8TD43 1214 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 ZC3H15Q8WU90 426 aaKnown RBP7.43□□□□□ -1.22
HMGCL-206ENST00000496907 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.43□□□□□ -1.22
HMGCL-206ENST00000496907 FAM122AQ96E09 287 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 EXOC6BQ9Y2D4 811 aa7.43□□□□□ -1.22
HMGCL-206ENST00000496907 PDS5AQ29RF7 1337 aaKnown RBP7.43□□□□□ -1.22
HMGCL-206ENST00000496907 DDX60Q8IY21 1712 aaKnown RBP7.43□□□□□ -1.22
HMGCL-206ENST00000496907 SPTBN5Q9NRC6 3674 aaKnown RBP7.42□□□□□ -1.22
HMGCL-206ENST00000496907 FAM155AB1AL88 458 aaPredicted RBP7.42□□□□□ -1.22
HMGCL-206ENST00000496907 ERC2O15083 957 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 PSEN1P49768 467 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 HIRAP54198 1017 aaPredicted RBP7.42□□□□□ -1.22
HMGCL-206ENST00000496907 HDLBPQ00341 1268 aaKnown RBP7.42□□□□□ -1.22
HMGCL-206ENST00000496907 PDAP1Q13442 181 aaKnown RBP7.42□□□□□ -1.22
HMGCL-206ENST00000496907 TTF1Q15361 905 aaPredicted RBP7.42□□□□□ -1.22
HMGCL-206ENST00000496907 DOK7Q18PE1 504 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 TTC39AQ5SRH9 613 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 CCDC102BQ68D86 513 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 RSBN1LQ6PCB5 846 aaPredicted RBP7.42□□□□□ -1.22
HMGCL-206ENST00000496907 KRT26Q7Z3Y9 468 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 SMC5Q8IY18 1101 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 CCDC102AQ96A19 550 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 XAGE2Q96GT9 111 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 LRCH3Q96II8 777 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 GBA2Q9HCG7 927 aaPredicted RBP7.42□□□□□ -1.22
HMGCL-206ENST00000496907 PGAP2Q9UHJ9 254 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 MAST3O60307 1309 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 FAM205AQ6ZU69 1335 aa7.42□□□□□ -1.22
HMGCL-206ENST00000496907 KIAA0100Q14667 2235 aaKnown RBP7.42□□□□□ -1.22
HMGCL-206ENST00000496907 TTC28Q96AY4 2481 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 SHTN1A0MZ66 631 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 SOX1O00570 391 aaPredicted RBP7.41□□□□□ -1.22
HMGCL-206ENST00000496907 MAP4K4O95819 1239 aaPredicted RBP7.41□□□□□ -1.22
HMGCL-206ENST00000496907 LDHCP07864 332 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 EN2P19622 333 aaPredicted RBP7.41□□□□□ -1.22
HMGCL-206ENST00000496907 GYG1P46976 350 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 BCAMP50895 628 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 GTF2IP78347 998 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 ANKRD45Q5TZF3 282 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 AACSQ86V21 672 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 CERS3Q8IU89 383 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 MICALL2Q8IY33 904 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 EAF2Q96CJ1 260 aaPredicted RBP7.41□□□□□ -1.22
HMGCL-206ENST00000496907 CCDC136Q96JN2 1154 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 DBNDD1Q9H9R9 158 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 PPP4R2Q9NY27 417 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 CNOT7Q9UIV1 285 aaKnown RBP7.41□□□□□ -1.22
HMGCL-206ENST00000496907 TTC41PQ6P2S7 1318 aa7.41□□□□□ -1.22
HMGCL-206ENST00000496907 ADM5C9JUS6 153 aa7.4□□□□□ -1.22
HMGCL-206ENST00000496907 GLRX3O76003 335 aaKnown RBP7.4□□□□□ -1.22
HMGCL-206ENST00000496907 USP17L8P0C7I0 530 aa7.4□□□□□ -1.22
HMGCL-206ENST00000496907 ATP5JP18859 108 aa7.4□□□□□ -1.22
HMGCL-206ENST00000496907 ARID4AP29374 1257 aaPredicted RBP7.4□□□□□ -1.22
HMGCL-206ENST00000496907 GSTO1P78417 241 aa7.4□□□□□ -1.22
HMGCL-206ENST00000496907 PKN2Q16513 984 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms