RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 DEFB132Q7Z7B7 95 aa10.4□□□□□ -0.74
HPS4-217ENST00000496385 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.74
HPS4-217ENST00000496385 FMNL3Q8IVF7 1028 aa10.4□□□□□ -0.74
HPS4-217ENST00000496385 CCAR1Q8IX12 1150 aaKnown RBP10.4□□□□□ -0.74
HPS4-217ENST00000496385 ENGASEQ8NFI3 743 aa10.4□□□□□ -0.74
HPS4-217ENST00000496385 IFNKQ9P0W0 207 aa10.4□□□□□ -0.74
HPS4-217ENST00000496385 EBAG9O00559 213 aa10.39□□□□□ -0.75
HPS4-217ENST00000496385 SHOX2O60902 331 aaPredicted RBP10.39□□□□□ -0.75
HPS4-217ENST00000496385 KRT24Q2M2I5 525 aa10.39□□□□□ -0.75
HPS4-217ENST00000496385 SPATS2Q86XZ4 545 aaKnown RBP10.39□□□□□ -0.75
HPS4-217ENST00000496385 PRPF38AQ8NAV1 312 aaKnown RBP10.39□□□□□ -0.75
HPS4-217ENST00000496385 AFAP1L1Q8TED9 768 aa10.39□□□□□ -0.75
HPS4-217ENST00000496385 MIEF2Q96C03 454 aa10.39□□□□□ -0.75
HPS4-217ENST00000496385 SOS1Q07889 1333 aaPredicted RBP10.39□□□□□ -0.75
HPS4-217ENST00000496385 FANCGO15287 622 aa10.39□□□□□ -0.75
HPS4-217ENST00000496385 KCNQ4P56696 695 aa10.39□□□□□ -0.75
HPS4-217ENST00000496385 CHMP4BP1P59074 171 aa10.39□□□□□ -0.75
HPS4-217ENST00000496385 TSHZ3Q63HK5 1081 aa10.39□□□□□ -0.75
HPS4-217ENST00000496385 FAM173BQ6P4H8 233 aa10.39□□□□□ -0.75
HPS4-217ENST00000496385 PPP2R2CQ9Y2T4 447 aa10.39□□□□□ -0.75
HPS4-217ENST00000496385 SRCAPQ6ZRS2 3230 aa10.39□□□□□ -0.75
HPS4-217ENST00000496385 DOT1LQ8TEK3 1739 aa10.39□□□□□ -0.75
HPS4-217ENST00000496385 GNG11P61952 73 aa10.38□□□□□ -0.75
HPS4-217ENST00000496385 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.75
HPS4-217ENST00000496385 KIFC2Q96AC6 838 aa10.38□□□□□ -0.75
HPS4-217ENST00000496385 CABS1Q96KC9 395 aa10.38□□□□□ -0.75
HPS4-217ENST00000496385 TPCN1Q9ULQ1 816 aa10.38□□□□□ -0.75
HPS4-217ENST00000496385 KDM6AO15550 1401 aaPredicted RBP10.38□□□□□ -0.75
HPS4-217ENST00000496385 STX10O60499 249 aa10.38□□□□□ -0.75
HPS4-217ENST00000496385 CASP8Q14790 479 aa10.38□□□□□ -0.75
HPS4-217ENST00000496385 NECTIN1Q15223 517 aa10.38□□□□□ -0.75
HPS4-217ENST00000496385 MAP9Q49MG5 647 aa10.38□□□□□ -0.75
HPS4-217ENST00000496385 KAT2BQ92831 832 aa10.38□□□□□ -0.75
HPS4-217ENST00000496385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.38□□□□□ -0.755e-7■□□□□ 11.2
HPS4-217ENST00000496385 TOGARAM1Q9Y4F4 1720 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 CHL1O00533 1208 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 CHUKO15111 745 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 CUTAO60888 179 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 APBA3O96018 575 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 GPTP24298 496 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 MCM3P25205 808 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 ELF1P32519 619 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 PI4K2BQ8TCG2 481 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 LARP6Q9BRS8 491 aaKnown RBP10.37□□□□□ -0.75
HPS4-217ENST00000496385 EPC1Q9H2F5 836 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 BICC1Q9H694 974 aaKnown RBP10.37□□□□□ -0.75
HPS4-217ENST00000496385 FAM204AQ9H8W3 233 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 ANKZF1Q9H8Y5 726 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 VEZTQ9HBM0 779 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 USP42Q9H9J4 1324 aaKnown RBP10.37□□□□□ -0.75
HPS4-217ENST00000496385 KLHL33A6NCF5 533 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 GNAT3A8MTJ3 354 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 SOCS7O14512 581 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 SSR1P43307 286 aaKnown RBP10.37□□□□□ -0.75
HPS4-217ENST00000496385 EN1Q05925 392 aaPredicted RBP10.37□□□□□ -0.75
HPS4-217ENST00000496385 CRYMQ14894 314 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 AKAP4Q5JQC9 854 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 KCNV1Q6PIU1 500 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 AMOTL1Q8IY63 956 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 IL17REQ8NFR9 667 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 CCDC102AQ96A19 550 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 SGSM3Q96HU1 749 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 MYH15Q9Y2K3 1946 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 RDXP35241 583 aaKnown RBP10.37□□□□□ -0.75
HPS4-217ENST00000496385 KIF4BQ2VIQ3 1234 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 NECAB1Q8N987 351 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 ZNF396Q96N95 335 aaPredicted RBP10.37□□□□□ -0.75
HPS4-217ENST00000496385 MIS18AQ9NYP9 233 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 CDC23Q9UJX2 597 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 FAM169AQ9Y6X4 670 aa10.37□□□□□ -0.75
HPS4-217ENST00000496385 SBF2Q86WG5 1849 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 MAP3K5Q99683 1374 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 GCFC2P16383 781 aaKnown RBP10.36□□□□□ -0.75
HPS4-217ENST00000496385 INPP5BP32019 993 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 FANCCQ00597 558 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 WDR93Q6P2C0 686 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 RNF217Q8TC41 542 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 PIGBQ92521 554 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 ABCB6Q9NP58 842 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 KIAA1468Q9P260 1216 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 MCM8Q9UJA3 840 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 A0A1W2PQ27 194 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 A0A1W2PQ64 194 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 A0A1W2PQD8 194 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 RNMTO43148 476 aaKnown RBP10.36□□□□□ -0.75
HPS4-217ENST00000496385 MRPL12P52815 198 aaKnown RBP10.36□□□□□ -0.75
HPS4-217ENST00000496385 CABP4P57796 275 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 NLRP12P59046 1061 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 SLC39A6Q13433 755 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 ADCK5Q3MIX3 580 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 PREPLQ4J6C6 727 aaPredicted RBP10.36□□□□□ -0.75
HPS4-217ENST00000496385 NAA16Q6N069 864 aaPredicted RBP10.36□□□□□ -0.75
HPS4-217ENST00000496385 CWC27Q6UX04 472 aaKnown RBP10.36□□□□□ -0.75
HPS4-217ENST00000496385 TEX11Q8IYF3 940 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 DCAF5Q96JK2 942 aa10.36□□□□□ -0.75
HPS4-217ENST00000496385 CPA1P15085 419 aa10.35□□□□□ -0.75
HPS4-217ENST00000496385 PPP2R5AQ15172 486 aa10.35□□□□□ -0.75
HPS4-217ENST00000496385 VSTM4Q8IW00 320 aa10.35□□□□□ -0.75
HPS4-217ENST00000496385 DHX58Q96C10 678 aa10.35□□□□□ -0.75
HPS4-217ENST00000496385 WDR24Q96S15 920 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms