RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 CCL15Q16663 113 aa17.86■□□□□ 0.45
CXCL12-208ENST00000496375 HOOK2Q96ED9 719 aa17.86■□□□□ 0.45
CXCL12-208ENST00000496375 COPRSQ9NQ92 184 aa17.86■□□□□ 0.45
CXCL12-208ENST00000496375 DAGLAQ9Y4D2 1042 aa17.86■□□□□ 0.45
CXCL12-208ENST00000496375 RPAP1Q9BWH6 1393 aaPredicted RBP17.86■□□□□ 0.45
CXCL12-208ENST00000496375 SPDYE5A6NIY4 337 aa17.85■□□□□ 0.45
CXCL12-208ENST00000496375 LDHBP07195 334 aaKnown RBP17.85■□□□□ 0.45
CXCL12-208ENST00000496375 PHKA1P46020 1223 aa17.85■□□□□ 0.45
CXCL12-208ENST00000496375 SP3Q02447 781 aa17.85■□□□□ 0.45
CXCL12-208ENST00000496375 ZKSCAN2Q63HK3 967 aa17.85■□□□□ 0.45
CXCL12-208ENST00000496375 DCAF15Q66K64 600 aa17.85■□□□□ 0.45
CXCL12-208ENST00000496375 FAM151AQ8WW52 585 aa17.85■□□□□ 0.45
CXCL12-208ENST00000496375 ZKSCAN4Q969J2 545 aaPredicted RBP17.85■□□□□ 0.45
CXCL12-208ENST00000496375 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
CXCL12-208ENST00000496375 ADORA1P30542 326 aa17.84■□□□□ 0.45
CXCL12-208ENST00000496375 TAF1CQ15572 869 aaPredicted RBP17.84■□□□□ 0.45
CXCL12-208ENST00000496375 CDC42EP5Q6NZY7 148 aa17.84■□□□□ 0.45
CXCL12-208ENST00000496375 RCAN3Q9UKA8 241 aa17.84■□□□□ 0.45
CXCL12-208ENST00000496375 AK9Q5TCS8 1911 aa17.84■□□□□ 0.45
CXCL12-208ENST00000496375 SALL1Q9NSC2 1324 aa17.83■□□□□ 0.44
CXCL12-208ENST00000496375 SEMA3EO15041 775 aa17.83■□□□□ 0.44
CXCL12-208ENST00000496375 GNAI3P08754 354 aa17.83■□□□□ 0.44
CXCL12-208ENST00000496375 TCP10Q12799 353 aa17.83■□□□□ 0.44
CXCL12-208ENST00000496375 CCDC102BQ68D86 513 aa17.83■□□□□ 0.44
CXCL12-208ENST00000496375 MIGA2Q7L4E1 593 aa17.83■□□□□ 0.44
CXCL12-208ENST00000496375 ERO1BQ86YB8 467 aa17.83■□□□□ 0.44
CXCL12-208ENST00000496375 FAM43AQ8N2R8 423 aa17.83■□□□□ 0.44
CXCL12-208ENST00000496375 ZNF341Q9BYN7 854 aa17.83■□□□□ 0.44
CXCL12-208ENST00000496375 EFCC1Q9HA90 598 aa17.83■□□□□ 0.44
CXCL12-208ENST00000496375 ZFYVE28Q9HCC9 887 aa17.83■□□□□ 0.44
CXCL12-208ENST00000496375 PTPN22Q9Y2R2 807 aa17.83■□□□□ 0.44
CXCL12-208ENST00000496375 SRGAP3O43295 1099 aa17.82■□□□□ 0.44
CXCL12-208ENST00000496375 TIMM10P62072 90 aa17.82■□□□□ 0.44
CXCL12-208ENST00000496375 CAP1Q01518 475 aa17.82■□□□□ 0.44
CXCL12-208ENST00000496375 NFIAQ12857 509 aa17.82■□□□□ 0.44
CXCL12-208ENST00000496375 USP40Q9NVE5 1235 aa17.82■□□□□ 0.44
CXCL12-208ENST00000496375 IRF6O14896 467 aa17.81■□□□□ 0.44
CXCL12-208ENST00000496375 CETPP11597 493 aa17.81■□□□□ 0.44
CXCL12-208ENST00000496375 INPP5BP32019 993 aa17.81■□□□□ 0.44
CXCL12-208ENST00000496375 PPIL2Q13356 520 aa17.81■□□□□ 0.44
CXCL12-208ENST00000496375 FRAT1Q92837 279 aaPredicted RBP17.81■□□□□ 0.44
CXCL12-208ENST00000496375 YTHDC1Q96MU7 727 aaKnown RBP17.81■□□□□ 0.44
CXCL12-208ENST00000496375 TNNQ9UQP3 1299 aa17.81■□□□□ 0.44
CXCL12-208ENST00000496375 MYH2Q9UKX2 1941 aa17.8■□□□□ 0.44
CXCL12-208ENST00000496375 BTBD19C9JJ37 291 aa17.8■□□□□ 0.44
CXCL12-208ENST00000496375 ZBTB22O15209 634 aa17.8■□□□□ 0.44
CXCL12-208ENST00000496375 SNAPC2Q13487 334 aa17.8■□□□□ 0.44
CXCL12-208ENST00000496375 RASGRF1Q13972 1273 aa17.8■□□□□ 0.44
CXCL12-208ENST00000496375 ZGPATQ8N5A5 531 aaKnown RBP17.8■□□□□ 0.44
CXCL12-208ENST00000496375 FAM198AQ9UFP1 575 aa17.8■□□□□ 0.44
CXCL12-208ENST00000496375 WDHD1O75717 1129 aaPredicted RBP17.79■□□□□ 0.44
CXCL12-208ENST00000496375 PPATQ06203 517 aa17.79■□□□□ 0.44
CXCL12-208ENST00000496375 TFCP2Q12800 502 aa17.79■□□□□ 0.44
CXCL12-208ENST00000496375 MTX1Q13505 466 aa17.79■□□□□ 0.44
CXCL12-208ENST00000496375 ZNF112Q9UJU3 913 aa17.79■□□□□ 0.44
CXCL12-208ENST00000496375 AKAP2Q9Y2D5 859 aa17.79■□□□□ 0.44
CXCL12-208ENST00000496375 A0A1B0GUL7 405 aa17.78■□□□□ 0.44
CXCL12-208ENST00000496375 SLC34A2O95436 690 aa17.78■□□□□ 0.44
CXCL12-208ENST00000496375 DZIP1Q86YF9 867 aaKnown RBP17.78■□□□□ 0.44
CXCL12-208ENST00000496375 ZFPM1Q8IX07 1006 aa17.78■□□□□ 0.44
CXCL12-208ENST00000496375 XAGE2Q96GT9 111 aa17.78■□□□□ 0.44
CXCL12-208ENST00000496375 ZCCHC17Q9NP64 241 aaKnown RBP17.78■□□□□ 0.44
CXCL12-208ENST00000496375 ABCF2Q9UG63 623 aa17.78■□□□□ 0.44
CXCL12-208ENST00000496375 BRCA2P51587 3418 aa17.78■□□□□ 0.44
CXCL12-208ENST00000496375 MKI67P46013 3256 aaKnown RBP17.78■□□□□ 0.44
CXCL12-208ENST00000496375 GAKO14976 1311 aa17.77■□□□□ 0.44
CXCL12-208ENST00000496375 PDS5AQ29RF7 1337 aaKnown RBP17.77■□□□□ 0.44
CXCL12-208ENST00000496375 TLR2O60603 784 aa17.77■□□□□ 0.44
CXCL12-208ENST00000496375 MVPQ14764 893 aaKnown RBP17.77■□□□□ 0.44
CXCL12-208ENST00000496375 ARHGEF6Q15052 776 aa17.77■□□□□ 0.44
CXCL12-208ENST00000496375 TMEM57Q8N5G2 664 aa17.77■□□□□ 0.44
CXCL12-208ENST00000496375 ARMC5Q96C12 935 aa17.77■□□□□ 0.44
CXCL12-208ENST00000496375 POTEFA5A3E0 1075 aa17.76■□□□□ 0.43
CXCL12-208ENST00000496375 GNAI2P04899 355 aa17.76■□□□□ 0.43
CXCL12-208ENST00000496375 MS4A1P11836 297 aa17.76■□□□□ 0.43
CXCL12-208ENST00000496375 RLBP1P12271 317 aa17.76■□□□□ 0.43
CXCL12-208ENST00000496375 RGS3P49796 1198 aa17.76■□□□□ 0.43
CXCL12-208ENST00000496375 NOL9Q5SY16 702 aaKnown RBP17.76■□□□□ 0.43
CXCL12-208ENST00000496375 PRPF38BQ5VTL8 546 aaKnown RBP17.76■□□□□ 0.43
CXCL12-208ENST00000496375 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.76■□□□□ 0.43
CXCL12-208ENST00000496375 CLUAP1Q96AJ1 413 aa17.76■□□□□ 0.43
CXCL12-208ENST00000496375 NEUROD6Q96NK8 337 aa17.76■□□□□ 0.43
CXCL12-208ENST00000496375 IDI2Q9BXS1 227 aa17.76■□□□□ 0.43
CXCL12-208ENST00000496375 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.76■□□□□ 0.43
CXCL12-208ENST00000496375 DOCK2Q92608 1830 aa17.76■□□□□ 0.43
CXCL12-208ENST00000496375 SPTY2D1Q68D10 685 aaPredicted RBP17.75■□□□□ 0.43
CXCL12-208ENST00000496375 SLF2Q8IX21 1173 aa17.75■□□□□ 0.43
CXCL12-208ENST00000496375 FAM163AQ96GL9 167 aaPredicted RBP17.75■□□□□ 0.43
CXCL12-208ENST00000496375 KCNH4Q9UQ05 1017 aa17.75■□□□□ 0.43
CXCL12-208ENST00000496375 PTCH2Q9Y6C5 1203 aa17.75■□□□□ 0.43
CXCL12-208ENST00000496375 RFX7Q2KHR2 1363 aa17.75■□□□□ 0.43
CXCL12-208ENST00000496375 KIAA0100Q14667 2235 aaKnown RBP17.75■□□□□ 0.43
CXCL12-208ENST00000496375 ZSWIM8A7E2V4 1837 aa17.75■□□□□ 0.43
CXCL12-208ENST00000496375 RBBP6Q7Z6E9 1792 aaKnown RBP17.74■□□□□ 0.43
CXCL12-208ENST00000496375 PNMA6EA0A0J9YXQ4 647 aa17.74■□□□□ 0.43
CXCL12-208ENST00000496375 ENTPD3O75355 529 aa17.74■□□□□ 0.43
CXCL12-208ENST00000496375 BTDP43251 543 aa17.74■□□□□ 0.43
CXCL12-208ENST00000496375 ZSCAN29Q8IWY8 852 aaPredicted RBP17.74■□□□□ 0.43
CXCL12-208ENST00000496375 FTSJ3Q8IY81 847 aaKnown RBP17.74■□□□□ 0.43
CXCL12-208ENST00000496375 ARHGAP39Q9C0H5 1083 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms