RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 TNNI2P48788 182 aa12.95□□□□□ -0.34
ERGIC3-219ENST00000496172 CAP1Q01518 475 aa12.95□□□□□ -0.34
ERGIC3-219ENST00000496172 SP3Q02447 781 aa12.95□□□□□ -0.34
ERGIC3-219ENST00000496172 TFCP2Q12800 502 aa12.95□□□□□ -0.34
ERGIC3-219ENST00000496172 PRKG1Q13976 671 aa12.95□□□□□ -0.34
ERGIC3-219ENST00000496172 NBPF11Q86T75 865 aa12.95□□□□□ -0.34
ERGIC3-219ENST00000496172 SLC17A8Q8NDX2 589 aa12.95□□□□□ -0.34
ERGIC3-219ENST00000496172 TDRD3Q9H7E2 651 aaKnown RBP12.95□□□□□ -0.34
ERGIC3-219ENST00000496172 TMOD2Q9NZR1 351 aa12.95□□□□□ -0.34
ERGIC3-219ENST00000496172 LAMA3Q16787 3333 aa12.95□□□□□ -0.34
ERGIC3-219ENST00000496172 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
ERGIC3-219ENST00000496172 TIMM10P62072 90 aa12.94□□□□□ -0.34
ERGIC3-219ENST00000496172 OS9Q13438 667 aaPredicted RBP12.94□□□□□ -0.34
ERGIC3-219ENST00000496172 RASA3Q14644 834 aa12.94□□□□□ -0.34
ERGIC3-219ENST00000496172 MVPQ14764 893 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-219ENST00000496172 ARHGEF6Q15052 776 aa12.94□□□□□ -0.34
ERGIC3-219ENST00000496172 GORABQ5T7V8 394 aa12.94□□□□□ -0.34
ERGIC3-219ENST00000496172 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
ERGIC3-219ENST00000496172 ZGPATQ8N5A5 531 aaKnown RBP12.94□□□□□ -0.34
ERGIC3-219ENST00000496172 SLC10A4Q96EP9 437 aa12.94□□□□□ -0.34
ERGIC3-219ENST00000496172 ZDHHC15Q96MV8 337 aa12.94□□□□□ -0.34
ERGIC3-219ENST00000496172 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
ERGIC3-219ENST00000496172 ARAP2Q8WZ64 1704 aa12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 A0A1B0GUL7 405 aa12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 TCP10L2B9ZVM9 353 aa12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 ZBTB7BO15156 539 aaPredicted RBP12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 LDHBP07195 334 aaKnown RBP12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 ADORA1P30542 326 aa12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 PHKA1P46020 1223 aa12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 IREB2P48200 963 aaKnown RBP12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 ATP8B2P98198 1209 aa12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 GRIK5Q16478 980 aa12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 SLC9C1Q4G0N8 1177 aa12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 HHIPL2Q6UWX4 724 aa12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 XAGE2Q96GT9 111 aa12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
ERGIC3-219ENST00000496172 A0A1W2PPC1 479 aa12.92□□□□□ -0.34
ERGIC3-219ENST00000496172 ZBTB22O15209 634 aa12.92□□□□□ -0.34
ERGIC3-219ENST00000496172 RLBP1P12271 317 aa12.92□□□□□ -0.34
ERGIC3-219ENST00000496172 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
ERGIC3-219ENST00000496172 NBPF12Q5TAG4 269 aaPredicted RBP12.92□□□□□ -0.34
ERGIC3-219ENST00000496172 C1orf115Q9H7X2 142 aa12.92□□□□□ -0.34
ERGIC3-219ENST00000496172 PTCH2Q9Y6C5 1203 aa12.92□□□□□ -0.34
ERGIC3-219ENST00000496172 AOX1Q06278 1338 aa12.91□□□□□ -0.34
ERGIC3-219ENST00000496172 SALL1Q9NSC2 1324 aa12.91□□□□□ -0.34
ERGIC3-219ENST00000496172 SURF6O75683 361 aaKnown RBP12.91□□□□□ -0.34
ERGIC3-219ENST00000496172 POLA2Q14181 598 aa12.91□□□□□ -0.34
ERGIC3-219ENST00000496172 SPTY2D1Q68D10 685 aaPredicted RBP12.91□□□□□ -0.34
ERGIC3-219ENST00000496172 SLF2Q8IX21 1173 aa12.91□□□□□ -0.34
ERGIC3-219ENST00000496172 PANK1Q8TE04 598 aa12.91□□□□□ -0.34
ERGIC3-219ENST00000496172 SSH3Q8TE77 659 aa12.91□□□□□ -0.34
ERGIC3-219ENST00000496172 HOOK2Q96ED9 719 aa12.91□□□□□ -0.34
ERGIC3-219ENST00000496172 CLMNQ96JQ2 1002 aa12.91□□□□□ -0.34
ERGIC3-219ENST00000496172 PTPN18Q99952 460 aa12.91□□□□□ -0.34
ERGIC3-219ENST00000496172 RCAN3Q9UKA8 241 aa12.91□□□□□ -0.34
ERGIC3-219ENST00000496172 PDS5AQ29RF7 1337 aaKnown RBP12.9□□□□□ -0.34
ERGIC3-219ENST00000496172 GJA5P36382 358 aa12.9□□□□□ -0.34
ERGIC3-219ENST00000496172 SLC4A8Q2Y0W8 1093 aa12.9□□□□□ -0.34
ERGIC3-219ENST00000496172 APOBEC3HQ6NTF7 200 aaKnown RBP12.9□□□□□ -0.34
ERGIC3-219ENST00000496172 CHMP4BQ9H444 224 aaKnown RBP12.9□□□□□ -0.34
ERGIC3-219ENST00000496172 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.9□□□□□ -0.34
ERGIC3-219ENST00000496172 MYH13Q9UKX3 1938 aa12.9□□□□□ -0.35
ERGIC3-219ENST00000496172 UQCRFS1P1P0C7P4 283 aa12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 PRDX5P30044 214 aa12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 CACNB3P54284 484 aa12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 RASGRF1Q13972 1273 aa12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 FKBP1CQ5VVH2 108 aa12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 UBE2Q1Q7Z7E8 422 aa12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 DZIP1Q86YF9 867 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 ANKRD13AQ8IZ07 590 aa12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 TMEM39BQ9GZU3 492 aa12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 ABCF2Q9UG63 623 aa12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 FZD1Q9UP38 647 aa12.89□□□□□ -0.35
ERGIC3-219ENST00000496172 ZSWIM8A7E2V4 1837 aa12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 USP2O75604 605 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 GNRH1P01148 92 aa12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 DIXDC1Q155Q3 683 aa12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 CCDC158Q5M9N0 1113 aa12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 ERICH6Q7L0X2 663 aa12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 SPATA5Q8NB90 893 aa12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 SHISA4Q96DD7 197 aa12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 GPR108Q9NPR9 543 aa12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 DDX19BQ9UMR2 479 aa12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 NOP58Q9Y2X3 529 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 DAGLAQ9Y4D2 1042 aa12.88□□□□□ -0.35
ERGIC3-219ENST00000496172 PRMT2P55345 433 aa12.87□□□□□ -0.35
ERGIC3-219ENST00000496172 TNNI3KQ59H18 835 aa12.87□□□□□ -0.35
ERGIC3-219ENST00000496172 CEP85Q6P2H3 762 aa12.87□□□□□ -0.35
ERGIC3-219ENST00000496172 TEPSINQ96N21 525 aa12.87□□□□□ -0.35
ERGIC3-219ENST00000496172 ZFYVE28Q9HCC9 887 aa12.87□□□□□ -0.35
ERGIC3-219ENST00000496172 USP40Q9NVE5 1235 aa12.87□□□□□ -0.35
ERGIC3-219ENST00000496172 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.87□□□□□ -0.35
ERGIC3-219ENST00000496172 FPGT-TNNI3KV9GXZ4 949 aa12.87□□□□□ -0.35
ERGIC3-219ENST00000496172 ARID4AP29374 1257 aaPredicted RBP12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 GSTO1P78417 241 aa12.86□□□□□ -0.35
ERGIC3-219ENST00000496172 MAP3K9P80192 1104 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms