RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 CHD4Q14839 1912 aa19.36■□□□□ 0.69
HLA-A-208ENST00000496081 PRC1O43663 620 aa19.36■□□□□ 0.69
HLA-A-208ENST00000496081 CLEC17AQ6ZS10 378 aa19.36■□□□□ 0.69
HLA-A-208ENST00000496081 NKX2-3Q8TAU0 364 aa19.36■□□□□ 0.69
HLA-A-208ENST00000496081 ZC3H12CQ9C0D7 883 aaKnown RBP19.36■□□□□ 0.69
HLA-A-208ENST00000496081 TIAM2Q8IVF5 1701 aa19.36■□□□□ 0.69
HLA-A-208ENST00000496081 WDR19Q8NEZ3 1342 aa19.35■□□□□ 0.69
HLA-A-208ENST00000496081 C10orf71Q711Q0 1435 aa19.35■□□□□ 0.69
HLA-A-208ENST00000496081 BRD1O95696 1058 aa19.35■□□□□ 0.69
HLA-A-208ENST00000496081 APOBRQ0VD83 1088 aa19.35■□□□□ 0.69
HLA-A-208ENST00000496081 GTF3C6Q969F1 213 aa19.35■□□□□ 0.69
HLA-A-208ENST00000496081 CNKSR1Q969H4 720 aa19.35■□□□□ 0.69
HLA-A-208ENST00000496081 GBP4Q96PP9 640 aa19.35■□□□□ 0.69
HLA-A-208ENST00000496081 ATF5Q9Y2D1 282 aaPredicted RBP19.35■□□□□ 0.69
HLA-A-208ENST00000496081 TACC3Q9Y6A5 838 aa19.35■□□□□ 0.69
HLA-A-208ENST00000496081 NEDD4P46934 1319 aa19.35■□□□□ 0.69
HLA-A-208ENST00000496081 FAM205AQ6ZU69 1335 aa19.35■□□□□ 0.69
HLA-A-208ENST00000496081 DTNBO60941 627 aa19.34■□□□□ 0.69
HLA-A-208ENST00000496081 GJB2P29033 226 aa19.34■□□□□ 0.69
HLA-A-208ENST00000496081 INCENPQ9NQS7 918 aa19.34■□□□□ 0.69
HLA-A-208ENST00000496081 GPHNQ9NQX3 736 aaPredicted RBP19.34■□□□□ 0.69
HLA-A-208ENST00000496081 EVCP57679 992 aa19.34■□□□□ 0.69
HLA-A-208ENST00000496081 GSTO1P78417 241 aa19.34■□□□□ 0.69
HLA-A-208ENST00000496081 AKNAD1Q5T1N1 836 aa19.34■□□□□ 0.69
HLA-A-208ENST00000496081 GIMAP6Q6P9H5 292 aa19.34■□□□□ 0.69
HLA-A-208ENST00000496081 CYB5R4Q7L1T6 521 aa19.34■□□□□ 0.69
HLA-A-208ENST00000496081 BAZ2AQ9UIF9 1905 aaKnown RBP19.33■□□□□ 0.69
HLA-A-208ENST00000496081 B4E1Z4 1266 aa19.33■□□□□ 0.68
HLA-A-208ENST00000496081 PFKFB2O60825 505 aa19.33■□□□□ 0.68
HLA-A-208ENST00000496081 PPARAQ07869 468 aa19.33■□□□□ 0.68
HLA-A-208ENST00000496081 DIXDC1Q155Q3 683 aa19.33■□□□□ 0.68
HLA-A-208ENST00000496081 MFSD14BQ5SR56 506 aa19.33■□□□□ 0.68
HLA-A-208ENST00000496081 TBC1D22AQ8WUA7 517 aa19.33■□□□□ 0.68
HLA-A-208ENST00000496081 STAG1Q8WVM7 1258 aa19.33■□□□□ 0.68
HLA-A-208ENST00000496081 C7orf43Q8WVR3 580 aa19.33■□□□□ 0.68
HLA-A-208ENST00000496081 CRNKL1Q9BZJ0 848 aaKnown RBP19.33■□□□□ 0.68
HLA-A-208ENST00000496081 BAG4O95429 457 aaKnown RBP19.32■□□□□ 0.68
HLA-A-208ENST00000496081 GTF2IP78347 998 aa19.32■□□□□ 0.68
HLA-A-208ENST00000496081 SCRN1Q12765 414 aa19.32■□□□□ 0.68
HLA-A-208ENST00000496081 MFSD6Q6ZSS7 791 aa19.32■□□□□ 0.68
HLA-A-208ENST00000496081 ZNF274Q96GC6 653 aaPredicted RBP19.32■□□□□ 0.68
HLA-A-208ENST00000496081 EYA3Q99504 573 aa19.32■□□□□ 0.68
HLA-A-208ENST00000496081 ANAPC4Q9UJX5 808 aa19.32■□□□□ 0.68
HLA-A-208ENST00000496081 MYH2Q9UKX2 1941 aa19.32■□□□□ 0.68
HLA-A-208ENST00000496081 LDHCP07864 332 aa19.32■□□□□ 0.68
HLA-A-208ENST00000496081 SYT1P21579 422 aa19.32■□□□□ 0.68
HLA-A-208ENST00000496081 PDIA3P30101 505 aaKnown RBP19.32■□□□□ 0.68
HLA-A-208ENST00000496081 FOXD4L5Q5VV16 416 aaPredicted RBP19.32■□□□□ 0.68
HLA-A-208ENST00000496081 FOXD4L4Q8WXT5 416 aaPredicted RBP19.32■□□□□ 0.68
HLA-A-208ENST00000496081 CNNM2Q9H8M5 875 aa19.32■□□□□ 0.68
HLA-A-208ENST00000496081 ZNF219Q9P2Y4 722 aaPredicted RBP19.32■□□□□ 0.68
HLA-A-208ENST00000496081 MINDY4BA8MYZ0 360 aa19.31■□□□□ 0.68
HLA-A-208ENST00000496081 DOK7Q18PE1 504 aa19.31■□□□□ 0.68
HLA-A-208ENST00000496081 DLEC1Q9Y238 1755 aa19.31■□□□□ 0.68
HLA-A-208ENST00000496081 MROH7-TTC4A0A0A0MT08 1334 aa19.31■□□□□ 0.68
HLA-A-208ENST00000496081 WDR33Q9C0J8 1336 aaKnown RBP19.31■□□□□ 0.68
HLA-A-208ENST00000496081 DDX11L8A8MPP1 907 aa19.3■□□□□ 0.68
HLA-A-208ENST00000496081 PPP4CP60510 307 aa19.3■□□□□ 0.68
HLA-A-208ENST00000496081 CTR9Q6PD62 1173 aa19.3■□□□□ 0.68
HLA-A-208ENST00000496081 KRT23Q9C075 422 aa19.3■□□□□ 0.68
HLA-A-208ENST00000496081 MTFR1LQ9H019 292 aa19.3■□□□□ 0.68
HLA-A-208ENST00000496081 DCP1AQ9NPI6 582 aaPredicted RBP19.3■□□□□ 0.68
HLA-A-208ENST00000496081 ATP8A2Q9NTI2 1148 aa19.3■□□□□ 0.68
HLA-A-208ENST00000496081 BRPF3Q9ULD4 1205 aa19.3■□□□□ 0.68
HLA-A-208ENST00000496081 SMIM22K7EJ46 135 aa19.29■□□□□ 0.68
HLA-A-208ENST00000496081 STX6O43752 255 aa19.29■□□□□ 0.68
HLA-A-208ENST00000496081 KDM4AO75164 1064 aa19.29■□□□□ 0.68
HLA-A-208ENST00000496081 RTFDC1Q9BY42 306 aaPredicted RBP19.29■□□□□ 0.68
HLA-A-208ENST00000496081 RNF41Q9H4P4 317 aaPredicted RBP19.29■□□□□ 0.68
HLA-A-208ENST00000496081 ZSWIM5Q9P217 1185 aa19.29■□□□□ 0.68
HLA-A-208ENST00000496081 SNED1Q8TER0 1413 aa19.29■□□□□ 0.68
HLA-A-208ENST00000496081 CYP2D7A0A087X1C5 515 aa19.29■□□□□ 0.68
HLA-A-208ENST00000496081 USP17L12C9JPN9 530 aa19.29■□□□□ 0.68
HLA-A-208ENST00000496081 USP17L21D6R901 530 aa19.29■□□□□ 0.68
HLA-A-208ENST00000496081 SH2B2O14492 632 aaPredicted RBP19.29■□□□□ 0.68
HLA-A-208ENST00000496081 BAG3O95817 575 aa19.29■□□□□ 0.68
HLA-A-208ENST00000496081 STK11IPQ8N1F8 1099 aa19.29■□□□□ 0.68
HLA-A-208ENST00000496081 TMEM87BQ96K49 555 aa19.29■□□□□ 0.68
HLA-A-208ENST00000496081 ANGEL1Q9UNK9 670 aaKnown RBP19.29■□□□□ 0.68
HLA-A-208ENST00000496081 G3V3G9 751 aa19.28■□□□□ 0.68
HLA-A-208ENST00000496081 CCT2P78371 535 aaKnown RBP19.28■□□□□ 0.68
HLA-A-208ENST00000496081 DCAF8Q5TAQ9 597 aa19.28■□□□□ 0.68
HLA-A-208ENST00000496081 IGDCC4Q8TDY8 1250 aa19.28■□□□□ 0.68
HLA-A-208ENST00000496081 SH3RF3Q8TEJ3 882 aaPredicted RBP19.28■□□□□ 0.68
HLA-A-208ENST00000496081 NAP1L2Q9ULW6 460 aaPredicted RBP19.28■□□□□ 0.68
HLA-A-208ENST00000496081 KLF18A0A0U1RQI7 1052 aa19.27■□□□□ 0.68
HLA-A-208ENST00000496081 JAK2O60674 1132 aa19.27■□□□□ 0.68
HLA-A-208ENST00000496081 RRP12Q5JTH9 1297 aaKnown RBP19.27■□□□□ 0.68
HLA-A-208ENST00000496081 CC2D2BQ6DHV5 1058 aa19.27■□□□□ 0.68
HLA-A-208ENST00000496081 CERS5Q8N5B7 392 aa19.27■□□□□ 0.68
HLA-A-208ENST00000496081 FAM163AQ96GL9 167 aaPredicted RBP19.27■□□□□ 0.68
HLA-A-208ENST00000496081 LLPHQ9BRT6 129 aaKnown RBP19.27■□□□□ 0.68
HLA-A-208ENST00000496081 NOL10Q9BSC4 688 aaKnown RBP19.27■□□□□ 0.68
HLA-A-208ENST00000496081 NCOA5Q9HCD5 579 aaKnown RBP19.27■□□□□ 0.68
HLA-A-208ENST00000496081 TOMM22Q9NS69 142 aa19.27■□□□□ 0.68
HLA-A-208ENST00000496081 MKRN1Q9UHC7 482 aaKnown RBP19.27■□□□□ 0.68
HLA-A-208ENST00000496081 KIF13BQ9NQT8 1826 aa19.27■□□□□ 0.67
HLA-A-208ENST00000496081 GPR75-ASB3A0A0A6YYF3 556 aa19.27■□□□□ 0.67
HLA-A-208ENST00000496081 CTDNEP1O95476 244 aa19.27■□□□□ 0.67
HLA-A-208ENST00000496081 ZSCAN22P10073 491 aaPredicted RBP19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms