RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 DEFB129Q9H1M3 183 aa24.35■■□□□ 1.49
LMO4-204ENST00000495705 MYH7P12883 1935 aa24.34■■□□□ 1.49
LMO4-204ENST00000495705 GPR75-ASB3A0A0A6YYF3 556 aa24.34■■□□□ 1.49
LMO4-204ENST00000495705 GLRX3O76003 335 aaKnown RBP24.34■■□□□ 1.49
LMO4-204ENST00000495705 CELF2O95319 508 aaKnown RBP24.34■■□□□ 1.49
LMO4-204ENST00000495705 BTDP43251 543 aa24.34■■□□□ 1.49
LMO4-204ENST00000495705 FMR1Q06787 632 aaKnown RBP eCLIP24.34■■□□□ 1.49
LMO4-204ENST00000495705 NOL10Q9BSC4 688 aaKnown RBP24.34■■□□□ 1.49
LMO4-204ENST00000495705 CREBZFQ9NS37 354 aa24.34■■□□□ 1.49
LMO4-204ENST00000495705 MAP4K4O95819 1239 aaPredicted RBP24.33■■□□□ 1.49
LMO4-204ENST00000495705 TSHZ3Q63HK5 1081 aa24.33■■□□□ 1.49
LMO4-204ENST00000495705 CDC42EP5Q6NZY7 148 aa24.33■■□□□ 1.49
LMO4-204ENST00000495705 STAP2Q9UGK3 403 aa24.33■■□□□ 1.49
LMO4-204ENST00000495705 SCAF8Q9UPN6 1271 aaKnown RBP24.33■■□□□ 1.49
LMO4-204ENST00000495705 PI4K2BQ8TCG2 481 aa24.32■■□□□ 1.48
LMO4-204ENST00000495705 ZNF408Q9H9D4 720 aa24.32■■□□□ 1.48
LMO4-204ENST00000495705 USP40Q9NVE5 1235 aa24.32■■□□□ 1.48
LMO4-204ENST00000495705 TCP10L2B9ZVM9 353 aa24.31■■□□□ 1.48
LMO4-204ENST00000495705 BAG3O95817 575 aa24.31■■□□□ 1.48
LMO4-204ENST00000495705 NF2P35240 595 aa24.31■■□□□ 1.48
LMO4-204ENST00000495705 PDE1AP54750 535 aa24.31■■□□□ 1.48
LMO4-204ENST00000495705 RASA3Q14644 834 aa24.31■■□□□ 1.48
LMO4-204ENST00000495705 CST9Q5W186 159 aa24.31■■□□□ 1.48
LMO4-204ENST00000495705 DLK2Q6UY11 383 aa24.31■■□□□ 1.48
LMO4-204ENST00000495705 FAM83AQ86UY5 434 aa24.31■■□□□ 1.48
LMO4-204ENST00000495705 MAGEB6Q8N7X4 407 aa24.31■■□□□ 1.48
LMO4-204ENST00000495705 EDC3Q96F86 508 aaKnown RBP24.31■■□□□ 1.48
LMO4-204ENST00000495705 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.31■■□□□ 1.48
LMO4-204ENST00000495705 CYP7A1P22680 504 aa24.3■■□□□ 1.48
LMO4-204ENST00000495705 CACNB3P54284 484 aa24.3■■□□□ 1.48
LMO4-204ENST00000495705 CERS3Q8IU89 383 aa24.3■■□□□ 1.48
LMO4-204ENST00000495705 RPAP1Q9BWH6 1393 aaPredicted RBP24.29■■□□□ 1.48
LMO4-204ENST00000495705 PAPPA2Q9BXP8 1791 aa24.29■■□□□ 1.48
LMO4-204ENST00000495705 PLCG2P16885 1265 aa24.29■■□□□ 1.48
LMO4-204ENST00000495705 SLC9C2Q5TAH2 1124 aa24.29■■□□□ 1.48
LMO4-204ENST00000495705 IDI2Q9BXS1 227 aa24.29■■□□□ 1.48
LMO4-204ENST00000495705 CNTNAP1P78357 1384 aa24.29■■□□□ 1.48
LMO4-204ENST00000495705 RFX7Q2KHR2 1363 aa24.29■■□□□ 1.48
LMO4-204ENST00000495705 PDE6AP16499 860 aa24.28■■□□□ 1.48
LMO4-204ENST00000495705 RHBDL3P58872 404 aa24.28■■□□□ 1.48
LMO4-204ENST00000495705 PPP4CP60510 307 aa24.28■■□□□ 1.48
LMO4-204ENST00000495705 PRAMEF18Q5VWM3 479 aa24.28■■□□□ 1.48
LMO4-204ENST00000495705 ZSCAN25Q6NSZ9 544 aa24.28■■□□□ 1.48
LMO4-204ENST00000495705 ADGRA1Q86SQ6 560 aa24.28■■□□□ 1.48
LMO4-204ENST00000495705 C2orf69Q8N8R5 385 aa24.28■■□□□ 1.48
LMO4-204ENST00000495705 GBA2Q9HCG7 927 aaPredicted RBP24.28■■□□□ 1.48
LMO4-204ENST00000495705 FKBP1BP68106 108 aa24.27■■□□□ 1.48
LMO4-204ENST00000495705 SUPT20HL1Q3ZLR7 823 aa24.27■■□□□ 1.48
LMO4-204ENST00000495705 ERICH6BQ5W0A0 696 aa24.27■■□□□ 1.48
LMO4-204ENST00000495705 KBTBD3Q8NAB2 608 aa24.27■■□□□ 1.48
LMO4-204ENST00000495705 FAM151AQ8WW52 585 aa24.27■■□□□ 1.48
LMO4-204ENST00000495705 AATFQ9NY61 560 aaKnown RBP eCLIP24.27■■□□□ 1.48
LMO4-204ENST00000495705 NFIAQ12857 509 aa24.26■■□□□ 1.47
LMO4-204ENST00000495705 CENPQQ7L2Z9 268 aaPredicted RBP24.26■■□□□ 1.47
LMO4-204ENST00000495705 TMEM39BQ9GZU3 492 aa24.26■■□□□ 1.47
LMO4-204ENST00000495705 OSBPL3Q9H4L5 887 aa24.26■■□□□ 1.47
LMO4-204ENST00000495705 ABT1Q9ULW3 272 aaKnown RBP24.26■■□□□ 1.47
LMO4-204ENST00000495705 FOCADQ5VW36 1801 aa24.26■■□□□ 1.47
LMO4-204ENST00000495705 CDK5RAP2Q96SN8 1893 aa24.26■■□□□ 1.47
LMO4-204ENST00000495705 ENTPD3O75355 529 aa24.25■■□□□ 1.47
LMO4-204ENST00000495705 NPM3O75607 178 aaKnown RBP24.25■■□□□ 1.47
LMO4-204ENST00000495705 WDHD1O75717 1129 aaPredicted RBP24.25■■□□□ 1.47
LMO4-204ENST00000495705 ADD2P35612 726 aa24.25■■□□□ 1.47
LMO4-204ENST00000495705 LRRFIP1Q32MZ4 808 aaKnown RBP24.25■■□□□ 1.47
LMO4-204ENST00000495705 PLEKHM2Q8IWE5 1019 aa24.25■■□□□ 1.47
LMO4-204ENST00000495705 TEX11Q8IYF3 940 aa24.25■■□□□ 1.47
LMO4-204ENST00000495705 TEPSINQ96N21 525 aa24.25■■□□□ 1.47
LMO4-204ENST00000495705 FAM198AQ9UFP1 575 aa24.25■■□□□ 1.47
LMO4-204ENST00000495705 TLL2Q9Y6L7 1015 aa24.25■■□□□ 1.47
LMO4-204ENST00000495705 ZNF532Q9HCE3 1301 aa24.25■■□□□ 1.47
LMO4-204ENST00000495705 AK9Q5TCS8 1911 aa24.25■■□□□ 1.47
LMO4-204ENST00000495705 SSC5DA1L4H1 1573 aa24.25■■□□□ 1.47
LMO4-204ENST00000495705 TCRBV5S4A2TA0A5A2 114 aa24.24■■□□□ 1.47
LMO4-204ENST00000495705 RGS3P49796 1198 aa24.24■■□□□ 1.47
LMO4-204ENST00000495705 HTRA3P83110 453 aa24.24■■□□□ 1.47
LMO4-204ENST00000495705 HOOK2Q96ED9 719 aa24.24■■□□□ 1.47
LMO4-204ENST00000495705 CCDC136Q96JN2 1154 aa24.24■■□□□ 1.47
LMO4-204ENST00000495705 UBE3CQ15386 1083 aa24.23■■□□□ 1.47
LMO4-204ENST00000495705 NBPF12Q5TAG4 269 aaPredicted RBP24.23■■□□□ 1.47
LMO4-204ENST00000495705 SAPCD2Q86UD0 394 aa24.23■■□□□ 1.47
LMO4-204ENST00000495705 MIGA1Q8NAN2 632 aa24.23■■□□□ 1.47
LMO4-204ENST00000495705 SH3RF3Q8TEJ3 882 aaPredicted RBP24.23■■□□□ 1.47
LMO4-204ENST00000495705 COL2A1P02458 1487 aaPredicted RBP24.22■■□□□ 1.47
LMO4-204ENST00000495705 PPP1R12BO60237 982 aaPredicted RBP24.22■■□□□ 1.47
LMO4-204ENST00000495705 ZFYP08048 801 aaPredicted RBP24.22■■□□□ 1.47
LMO4-204ENST00000495705 TCP10Q12799 353 aa24.22■■□□□ 1.47
LMO4-204ENST00000495705 PICALMQ13492 652 aa24.22■■□□□ 1.47
LMO4-204ENST00000495705 HHIPL1Q96JK4 782 aa24.22■■□□□ 1.47
LMO4-204ENST00000495705 MAGEB6P1A0A0J9YX57 407 aa24.21■■□□□ 1.47
LMO4-204ENST00000495705 RASSF10A6NK89 507 aa24.21■■□□□ 1.47
LMO4-204ENST00000495705 DYNLL1P63167 89 aaKnown RBP24.21■■□□□ 1.47
LMO4-204ENST00000495705 TTLL12Q14166 644 aaPredicted RBP24.21■■□□□ 1.47
LMO4-204ENST00000495705 ARMC9Q7Z3E5 817 aa24.21■■□□□ 1.47
LMO4-204ENST00000495705 EVI5LQ96CN4 794 aa24.21■■□□□ 1.47
LMO4-204ENST00000495705 FSD1Q9BTV5 496 aa24.21■■□□□ 1.47
LMO4-204ENST00000495705 DDX4Q9NQI0 724 aaKnown RBP24.21■■□□□ 1.47
LMO4-204ENST00000495705 HUNKP57058 714 aa24.2■■□□□ 1.46
LMO4-204ENST00000495705 CDAN1Q8IWY9 1227 aa24.2■■□□□ 1.46
LMO4-204ENST00000495705 RIOK1Q9BRS2 568 aaKnown RBP24.2■■□□□ 1.46
LMO4-204ENST00000495705 PDE4AP27815 886 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms