RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.29
RFTN1-211ENST00000495666 CCDC102BQ68D86 513 aa13.27□□□□□ -0.29
RFTN1-211ENST00000495666 PI16Q6UXB8 463 aa13.27□□□□□ -0.29
RFTN1-211ENST00000495666 ATF7IPQ6VMQ6 1270 aa13.27□□□□□ -0.29
RFTN1-211ENST00000495666 ZSCAN29Q8IWY8 852 aaPredicted RBP13.27□□□□□ -0.29
RFTN1-211ENST00000495666 FTSJ3Q8IY81 847 aaKnown RBP13.27□□□□□ -0.29
RFTN1-211ENST00000495666 USP40Q9NVE5 1235 aa13.27□□□□□ -0.29
RFTN1-211ENST00000495666 PNMA6EA0A0J9YXQ4 647 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 ALDH1A1P00352 501 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 GNAI2P04899 355 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 LAMB1P07942 1786 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 SLURP2P0DP57 97 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 INPP5BP32019 993 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 HDLBPQ00341 1268 aaKnown RBP13.26□□□□□ -0.29
RFTN1-211ENST00000495666 RASGRF1Q13972 1273 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 TAF1CQ15572 869 aaPredicted RBP13.26□□□□□ -0.29
RFTN1-211ENST00000495666 INTS3Q68E01 1043 aaKnown RBP13.26□□□□□ -0.29
RFTN1-211ENST00000495666 OTUD7BQ6GQQ9 843 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 CDC42EP5Q6NZY7 148 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 ITPRIPQ8IWB1 547 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.26□□□□□ -0.29
RFTN1-211ENST00000495666 XAGE2Q96GT9 111 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 PTPN18Q99952 460 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 DENND2AQ9ULE3 1009 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 HDAC5Q9UQL6 1122 aa13.26□□□□□ -0.29
RFTN1-211ENST00000495666 ZKSCAN2Q63HK3 967 aa13.25□□□□□ -0.29
RFTN1-211ENST00000495666 ZFPM1Q8IX07 1006 aa13.25□□□□□ -0.29
RFTN1-211ENST00000495666 BRI3BPQ8WY22 251 aa13.25□□□□□ -0.29
RFTN1-211ENST00000495666 COPRSQ9NQ92 184 aa13.25□□□□□ -0.29
RFTN1-211ENST00000495666 SNCAIPQ9Y6H5 919 aa13.25□□□□□ -0.29
RFTN1-211ENST00000495666 INHBEP58166 350 aa13.24□□□□□ -0.29
RFTN1-211ENST00000495666 G3BP1Q13283 466 aaKnown RBP eCLIP13.24□□□□□ -0.29
RFTN1-211ENST00000495666 DCAF15Q66K64 600 aa13.24□□□□□ -0.29
RFTN1-211ENST00000495666 HHIPL2Q6UWX4 724 aa13.24□□□□□ -0.29
RFTN1-211ENST00000495666 TBC1D9Q6ZT07 1266 aa13.24□□□□□ -0.29
RFTN1-211ENST00000495666 OTOP1Q7RTM1 612 aa13.24□□□□□ -0.29
RFTN1-211ENST00000495666 FAM43AQ8N2R8 423 aa13.24□□□□□ -0.29
RFTN1-211ENST00000495666 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
RFTN1-211ENST00000495666 ZNF341Q9BYN7 854 aa13.24□□□□□ -0.29
RFTN1-211ENST00000495666 SNRKQ9NRH2 765 aa13.24□□□□□ -0.29
RFTN1-211ENST00000495666 FAM196BA6NMK8 535 aa13.23□□□□□ -0.29
RFTN1-211ENST00000495666 IRF6O14896 467 aa13.23□□□□□ -0.29
RFTN1-211ENST00000495666 TNRC18O15417 2968 aaPredicted RBP13.23□□□□□ -0.29
RFTN1-211ENST00000495666 BTDP43251 543 aa13.23□□□□□ -0.29
RFTN1-211ENST00000495666 RGS3P49796 1198 aa13.23□□□□□ -0.29
RFTN1-211ENST00000495666 GTF2A2P52657 109 aa13.23□□□□□ -0.29
RFTN1-211ENST00000495666 MVPQ14764 893 aaKnown RBP13.23□□□□□ -0.29
RFTN1-211ENST00000495666 FBXO46Q6PJ61 603 aaPredicted RBP13.23□□□□□ -0.29
RFTN1-211ENST00000495666 FAM83AQ86UY5 434 aa13.23□□□□□ -0.29
RFTN1-211ENST00000495666 FAM151AQ8WW52 585 aa13.23□□□□□ -0.29
RFTN1-211ENST00000495666 ARHGAP45Q92619 1136 aa13.23□□□□□ -0.29
RFTN1-211ENST00000495666 RAI14Q9P0K7 980 aa13.23□□□□□ -0.29
RFTN1-211ENST00000495666 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.23□□□□□ -0.29
RFTN1-211ENST00000495666 FAM198AQ9UFP1 575 aa13.23□□□□□ -0.29
RFTN1-211ENST00000495666 AKAP2Q9Y2D5 859 aa13.23□□□□□ -0.29
RFTN1-211ENST00000495666 SUGT1Q9Y2Z0 365 aa13.23□□□□□ -0.29
RFTN1-211ENST00000495666 MYO5AQ9Y4I1 1855 aaKnown RBP13.23□□□□□ -0.29
RFTN1-211ENST00000495666 SPDYE5A6NIY4 337 aa13.22□□□□□ -0.29
RFTN1-211ENST00000495666 SP3Q02447 781 aa13.22□□□□□ -0.29
RFTN1-211ENST00000495666 PKN2Q16513 984 aaKnown RBP13.22□□□□□ -0.29
RFTN1-211ENST00000495666 CCDC84Q86UT8 332 aaPredicted RBP13.22□□□□□ -0.29
RFTN1-211ENST00000495666 ERO1BQ86YB8 467 aa13.22□□□□□ -0.29
RFTN1-211ENST00000495666 HOOK2Q96ED9 719 aa13.22□□□□□ -0.29
RFTN1-211ENST00000495666 ERO1AQ96HE7 468 aa13.22□□□□□ -0.29
RFTN1-211ENST00000495666 MS4A4AQ96JQ5 239 aa13.22□□□□□ -0.29
RFTN1-211ENST00000495666 EFCC1Q9HA90 598 aa13.22□□□□□ -0.29
RFTN1-211ENST00000495666 ZFYVE28Q9HCC9 887 aa13.22□□□□□ -0.29
RFTN1-211ENST00000495666 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
RFTN1-211ENST00000495666 CAP1Q01518 475 aa13.21□□□□□ -0.29
RFTN1-211ENST00000495666 MECOMQ03112 1051 aa13.21□□□□□ -0.29
RFTN1-211ENST00000495666 SNAPC2Q13487 334 aa13.21□□□□□ -0.29
RFTN1-211ENST00000495666 SLC4A8Q2Y0W8 1093 aa13.21□□□□□ -0.29
RFTN1-211ENST00000495666 TTC39AQ5SRH9 613 aa13.21□□□□□ -0.29
RFTN1-211ENST00000495666 ERICH6Q7L0X2 663 aa13.21□□□□□ -0.29
RFTN1-211ENST00000495666 ZGPATQ8N5A5 531 aaKnown RBP13.21□□□□□ -0.29
RFTN1-211ENST00000495666 BTBD19C9JJ37 291 aa13.2□□□□□ -0.3
RFTN1-211ENST00000495666 APBB1O00213 710 aa13.2□□□□□ -0.3
RFTN1-211ENST00000495666 SEMA3EO15041 775 aa13.2□□□□□ -0.3
RFTN1-211ENST00000495666 CETPP11597 493 aa13.2□□□□□ -0.3
RFTN1-211ENST00000495666 RLBP1P12271 317 aa13.2□□□□□ -0.3
RFTN1-211ENST00000495666 RGS19P49795 217 aa13.2□□□□□ -0.3
RFTN1-211ENST00000495666 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
RFTN1-211ENST00000495666 ARHGAP39Q9C0H5 1083 aa13.2□□□□□ -0.3
RFTN1-211ENST00000495666 DDX4Q9NQI0 724 aaKnown RBP13.2□□□□□ -0.3
RFTN1-211ENST00000495666 HMG20BQ9P0W2 317 aa13.2□□□□□ -0.3
RFTN1-211ENST00000495666 CPA4Q9UI42 421 aa13.2□□□□□ -0.3
RFTN1-211ENST00000495666 CENPFP49454 3210 aa13.2□□□□□ -0.3
RFTN1-211ENST00000495666 RPAP1Q9BWH6 1393 aaPredicted RBP13.2□□□□□ -0.3
RFTN1-211ENST00000495666 MROH7-TTC4A0A0A0MT08 1334 aa13.19□□□□□ -0.3
RFTN1-211ENST00000495666 DOCK1Q14185 1865 aa13.19□□□□□ -0.3
RFTN1-211ENST00000495666 ATAD5Q96QE3 1844 aa13.19□□□□□ -0.3
RFTN1-211ENST00000495666 UNCXA6NJT0 531 aa13.19□□□□□ -0.3
RFTN1-211ENST00000495666 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
RFTN1-211ENST00000495666 WDHD1O75717 1129 aaPredicted RBP13.19□□□□□ -0.3
RFTN1-211ENST00000495666 FKBP1CQ5VVH2 108 aa13.19□□□□□ -0.3
RFTN1-211ENST00000495666 SPTY2D1Q68D10 685 aaPredicted RBP13.19□□□□□ -0.3
RFTN1-211ENST00000495666 GADL1Q6ZQY3 521 aa13.19□□□□□ -0.3
RFTN1-211ENST00000495666 PANK1Q8TE04 598 aa13.19□□□□□ -0.3
RFTN1-211ENST00000495666 CFHR5Q9BXR6 569 aa13.19□□□□□ -0.3
RFTN1-211ENST00000495666 LRP2BPQ9P2M1 347 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms