RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 PAK6Q9NQU5 681 aaPredicted RBP8.55□□□□□ -1.04
SRRM1-219ENST00000495561 DAGLAQ9Y4D2 1042 aa8.55□□□□□ -1.04
SRRM1-219ENST00000495561 KRTAP4-8A0A0G2JLE6 195 aa8.54□□□□□ -1.04
SRRM1-219ENST00000495561 PTPN12Q05209 780 aaKnown RBP8.54□□□□□ -1.04
SRRM1-219ENST00000495561 AP3B2Q13367 1082 aa8.54□□□□□ -1.04
SRRM1-219ENST00000495561 PPP1R9AQ9ULJ8 1098 aa8.54□□□□□ -1.04
SRRM1-219ENST00000495561 SYNGAP1Q96PV0 1343 aa8.54□□□□□ -1.04
SRRM1-219ENST00000495561 PRPF40BQ6NWY9 871 aaKnown RBP8.53□□□□□ -1.04
SRRM1-219ENST00000495561 CCDC74AQ96AQ1 378 aa8.53□□□□□ -1.04
SRRM1-219ENST00000495561 LGR6Q9HBX8 967 aa8.53□□□□□ -1.04
SRRM1-219ENST00000495561 EIF1AYO14602 144 aaKnown RBP8.52□□□□□ -1.05
SRRM1-219ENST00000495561 IGHA2P01877 340 aa8.52□□□□□ -1.05
SRRM1-219ENST00000495561 ITGB5P18084 799 aa8.52□□□□□ -1.05
SRRM1-219ENST00000495561 RPS26P11Q5JNZ5 115 aaPredicted RBP8.52□□□□□ -1.05
SRRM1-219ENST00000495561 OGFOD3Q6PK18 319 aa8.52□□□□□ -1.05
SRRM1-219ENST00000495561 AGBL5Q8NDL9 886 aa8.52□□□□□ -1.05
SRRM1-219ENST00000495561 WDR89Q96FK6 387 aaPredicted RBP8.52□□□□□ -1.05
SRRM1-219ENST00000495561 ARID1BQ8NFD5 2236 aaPredicted RBP8.52□□□□□ -1.05
SRRM1-219ENST00000495561 TMEM238LA0A1B0GVL6 79 aa8.51□□□□□ -1.05
SRRM1-219ENST00000495561 GPR182O15218 404 aa8.51□□□□□ -1.05
SRRM1-219ENST00000495561 TMPRSS2O15393 492 aa8.51□□□□□ -1.05
SRRM1-219ENST00000495561 LIG1P18858 919 aa8.51□□□□□ -1.05
SRRM1-219ENST00000495561 FAAP100Q0VG06 881 aa8.51□□□□□ -1.05
SRRM1-219ENST00000495561 CITED4Q96RK1 184 aa8.51□□□□□ -1.05
SRRM1-219ENST00000495561 DNAJC25Q9H1X3 360 aa8.51□□□□□ -1.05
SRRM1-219ENST00000495561 CCDC86Q9H6F5 360 aaKnown RBP8.51□□□□□ -1.05
SRRM1-219ENST00000495561 GADD45BO75293 160 aaPredicted RBP8.5□□□□□ -1.05
SRRM1-219ENST00000495561 ZNF157P51786 506 aaPredicted RBP8.5□□□□□ -1.05
SRRM1-219ENST00000495561 OGFOD2Q6N063 350 aa8.5□□□□□ -1.05
SRRM1-219ENST00000495561 GLIS3Q8NEA6 775 aa8.5□□□□□ -1.05
SRRM1-219ENST00000495561 NIF3L1Q9GZT8 377 aa8.5□□□□□ -1.05
SRRM1-219ENST00000495561 WFDC3Q8IUB2 231 aa8.49□□□□□ -1.05
SRRM1-219ENST00000495561 BCL7CQ8WUZ0 217 aaPredicted RBP8.49□□□□□ -1.05
SRRM1-219ENST00000495561 ASIC4Q96FT7 647 aa8.49□□□□□ -1.05
SRRM1-219ENST00000495561 ZC3H12CQ9C0D7 883 aaKnown RBP8.49□□□□□ -1.05
SRRM1-219ENST00000495561 CRIM1Q9NZV1 1036 aa8.49□□□□□ -1.05
SRRM1-219ENST00000495561 ZNF862O60290 1169 aa8.48□□□□□ -1.05
SRRM1-219ENST00000495561 JUNBP17275 347 aaPredicted RBP8.48□□□□□ -1.05
SRRM1-219ENST00000495561 GRM2Q14416 872 aa8.48□□□□□ -1.05
SRRM1-219ENST00000495561 ZNF574Q6ZN55 896 aaPredicted RBP8.48□□□□□ -1.05
SRRM1-219ENST00000495561 TXNDC2Q86VQ3 553 aa8.48□□□□□ -1.05
SRRM1-219ENST00000495561 TRAK1Q9UPV9 953 aa8.48□□□□□ -1.05
SRRM1-219ENST00000495561 SLC5A6Q9Y289 635 aa8.48□□□□□ -1.05
SRRM1-219ENST00000495561 ID3Q02535 119 aa8.47□□□□□ -1.05
SRRM1-219ENST00000495561 CDK5R2Q13319 367 aa8.47□□□□□ -1.05
SRRM1-219ENST00000495561 CYP27C1Q4G0S4 372 aa8.47□□□□□ -1.05
SRRM1-219ENST00000495561 TMC1Q8TDI8 760 aa8.47□□□□□ -1.05
SRRM1-219ENST00000495561 EPS8L3Q8TE67 593 aaKnown RBP8.47□□□□□ -1.05
SRRM1-219ENST00000495561 FANCD2OSQ96PS1 177 aa8.47□□□□□ -1.05
SRRM1-219ENST00000495561 CSRNP1Q96S65 589 aa8.47□□□□□ -1.05
SRRM1-219ENST00000495561 ATXN3LQ9H3M9 355 aa8.47□□□□□ -1.05
SRRM1-219ENST00000495561 SLFN14P0C7P3 912 aa8.46□□□□□ -1.06
SRRM1-219ENST00000495561 FAM87AP0C7U9 286 aa8.46□□□□□ -1.06
SRRM1-219ENST00000495561 KIF4BQ2VIQ3 1234 aa8.46□□□□□ -1.06
SRRM1-219ENST00000495561 SPRED2Q7Z698 418 aa8.46□□□□□ -1.06
SRRM1-219ENST00000495561 PIDD1Q9HB75 910 aa8.46□□□□□ -1.06
SRRM1-219ENST00000495561 DISC1Q9NRI5 854 aa8.46□□□□□ -1.06
SRRM1-219ENST00000495561 PCDHGC5Q9Y5F6 944 aa8.46□□□□□ -1.06
SRRM1-219ENST00000495561 GSTP1P09211 210 aaKnown RBP8.45□□□□□ -1.06
SRRM1-219ENST00000495561 STK11IPQ8N1F8 1099 aa8.45□□□□□ -1.06
SRRM1-219ENST00000495561 ALKBH8Q96BT7 664 aaKnown RBP8.45□□□□□ -1.06
SRRM1-219ENST00000495561 KRT82Q9NSB4 513 aa8.45□□□□□ -1.06
SRRM1-219ENST00000495561 BNIP3Q12983 259 aa8.44□□□□□ -1.06
SRRM1-219ENST00000495561 FZD5Q13467 585 aa8.44□□□□□ -1.06
SRRM1-219ENST00000495561 PLCL1Q15111 1095 aa8.44□□□□□ -1.06
SRRM1-219ENST00000495561 SMYD4Q8IYR2 804 aaPredicted RBP8.44□□□□□ -1.06
SRRM1-219ENST00000495561 PLD6Q8N2A8 252 aaKnown RBP8.44□□□□□ -1.06
SRRM1-219ENST00000495561 POU5F2Q8N7G0 328 aa8.44□□□□□ -1.06
SRRM1-219ENST00000495561 FAM181AQ8N9Y4 354 aa8.44□□□□□ -1.06
SRRM1-219ENST00000495561 DMRTB1Q96MA1 342 aa8.44□□□□□ -1.06
SRRM1-219ENST00000495561 PAPLNO95428 1278 aa8.43□□□□□ -1.06
SRRM1-219ENST00000495561 FCGRTP55899 365 aa8.43□□□□□ -1.06
SRRM1-219ENST00000495561 TTLL4Q14679 1199 aa8.43□□□□□ -1.06
SRRM1-219ENST00000495561 ZNF792Q3KQV3 632 aa8.43□□□□□ -1.06
SRRM1-219ENST00000495561 DTHD1Q6ZMT9 781 aa8.43□□□□□ -1.06
SRRM1-219ENST00000495561 MISP3Q96FF7 219 aa8.43□□□□□ -1.06
SRRM1-219ENST00000495561 RBCK1Q9BYM8 510 aa8.43□□□□□ -1.06
SRRM1-219ENST00000495561 U3KQE9 123 aa8.43□□□□□ -1.06
SRRM1-219ENST00000495561 PI16Q6UXB8 463 aa8.42□□□□□ -1.06
SRRM1-219ENST00000495561 C14orf37Q86TY3 774 aa8.42□□□□□ -1.06
SRRM1-219ENST00000495561 PDZD3Q86UT5 571 aa8.42□□□□□ -1.06
SRRM1-219ENST00000495561 NETO1Q8TDF5 533 aa8.42□□□□□ -1.06
SRRM1-219ENST00000495561 TMEM39AQ9NV64 488 aa8.42□□□□□ -1.06
SRRM1-219ENST00000495561 GPN3Q9UHW5 284 aaPredicted RBP8.42□□□□□ -1.06
SRRM1-219ENST00000495561 RNGTTO60942 597 aaKnown RBP8.41□□□□□ -1.06
SRRM1-219ENST00000495561 LEFTY1O75610 366 aa8.41□□□□□ -1.06
SRRM1-219ENST00000495561 HCLS1P14317 486 aaPredicted RBP8.41□□□□□ -1.06
SRRM1-219ENST00000495561 PPP2R3AQ06190 1150 aa8.41□□□□□ -1.06
SRRM1-219ENST00000495561 NEFMP07197 916 aa8.4□□□□□ -1.06
SRRM1-219ENST00000495561 C8AP07357 584 aa8.4□□□□□ -1.06
SRRM1-219ENST00000495561 HNRNPUQ00839 825 aaKnown RBP eCLIP8.4□□□□□ -1.06
SRRM1-219ENST00000495561 STK35Q8TDR2 534 aa8.4□□□□□ -1.06
SRRM1-219ENST00000495561 KCNB2Q92953 911 aa8.4□□□□□ -1.06
SRRM1-219ENST00000495561 CD8BP10966 210 aa8.39□□□□□ -1.07
SRRM1-219ENST00000495561 JAG1P78504 1218 aa8.39□□□□□ -1.07
SRRM1-219ENST00000495561 DUSP23Q9BVJ7 150 aa8.39□□□□□ -1.07
SRRM1-219ENST00000495561 BCO2Q9BYV7 579 aa8.39□□□□□ -1.07
SRRM1-219ENST00000495561 NLRP2Q9NX02 1062 aa8.39□□□□□ -1.07
SRRM1-219ENST00000495561 PCOLCE2Q9UKZ9 415 aa8.39□□□□□ -1.07
SRRM1-219ENST00000495561 FUT4P22083 530 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms