RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 LIMCH1Q9UPQ0 1083 aa19.38■□□□□ 0.69
CBX4-204ENST00000495122 GOLGA6L22H0YM25 854 aa19.37■□□□□ 0.69
CBX4-204ENST00000495122 GOLIM4O00461 696 aa19.37■□□□□ 0.69
CBX4-204ENST00000495122 SLC27A2O14975 620 aa19.37■□□□□ 0.69
CBX4-204ENST00000495122 IGHMBP2P38935 993 aaKnown RBP19.37■□□□□ 0.69
CBX4-204ENST00000495122 TBC1D10BQ4KMP7 808 aaPredicted RBP19.37■□□□□ 0.69
CBX4-204ENST00000495122 RUFY3Q7L099 469 aa19.37■□□□□ 0.69
CBX4-204ENST00000495122 CDC37L1Q7L3B6 337 aa19.37■□□□□ 0.69
CBX4-204ENST00000495122 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.37■□□□□ 0.69
CBX4-204ENST00000495122 MINPP1Q9UNW1 487 aa19.37■□□□□ 0.69
CBX4-204ENST00000495122 CASP8AP2Q9UKL3 1982 aa19.36■□□□□ 0.69
CBX4-204ENST00000495122 MYH7P12883 1935 aa19.36■□□□□ 0.69
CBX4-204ENST00000495122 G3V3G9 751 aa19.36■□□□□ 0.69
CBX4-204ENST00000495122 CELF2O95319 508 aaKnown RBP19.36■□□□□ 0.69
CBX4-204ENST00000495122 SLC5A1P13866 664 aa19.36■□□□□ 0.69
CBX4-204ENST00000495122 CASTP20810 708 aaKnown RBP19.36■□□□□ 0.69
CBX4-204ENST00000495122 FGFR2P21802 821 aa19.36■□□□□ 0.69
CBX4-204ENST00000495122 ARID4AP29374 1257 aaPredicted RBP19.36■□□□□ 0.69
CBX4-204ENST00000495122 SKOR2Q2VWA4 1001 aaPredicted RBP19.36■□□□□ 0.69
CBX4-204ENST00000495122 DCAF8Q5TAQ9 597 aa19.36■□□□□ 0.69
CBX4-204ENST00000495122 TNS4Q8IZW8 715 aa19.36■□□□□ 0.69
CBX4-204ENST00000495122 CAPNS2Q96L46 248 aa19.36■□□□□ 0.69
CBX4-204ENST00000495122 MPHOSPH8Q99549 860 aa19.36■□□□□ 0.69
CBX4-204ENST00000495122 UPF3BQ9BZI7 483 aaKnown RBP19.36■□□□□ 0.69
CBX4-204ENST00000495122 WBP1LQ9NX94 342 aa19.36■□□□□ 0.69
CBX4-204ENST00000495122 PAPPA2Q9BXP8 1791 aa19.35■□□□□ 0.69
CBX4-204ENST00000495122 WTIPA6NIX2 430 aaPredicted RBP19.35■□□□□ 0.69
CBX4-204ENST00000495122 ECE1P42892 770 aa19.35■□□□□ 0.69
CBX4-204ENST00000495122 CYP4F22Q6NT55 531 aa19.35■□□□□ 0.69
CBX4-204ENST00000495122 RSBN1LQ6PCB5 846 aaPredicted RBP19.35■□□□□ 0.69
CBX4-204ENST00000495122 AIDAQ96BJ3 306 aa19.35■□□□□ 0.69
CBX4-204ENST00000495122 JAKMIP1Q96N16 626 aaKnown RBP19.35■□□□□ 0.69
CBX4-204ENST00000495122 PDRG1Q9NUG6 133 aa19.35■□□□□ 0.69
CBX4-204ENST00000495122 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.35■□□□□ 0.69
CBX4-204ENST00000495122 HMGB1P09429 215 aaKnown RBP19.34■□□□□ 0.69
CBX4-204ENST00000495122 KIF4BQ2VIQ3 1234 aa19.34■□□□□ 0.69
CBX4-204ENST00000495122 SAPCD2Q86UD0 394 aa19.34■□□□□ 0.69
CBX4-204ENST00000495122 ZNF589Q86UQ0 364 aaPredicted RBP19.34■□□□□ 0.69
CBX4-204ENST00000495122 EDC3Q96F86 508 aaKnown RBP19.34■□□□□ 0.69
CBX4-204ENST00000495122 LAMB1P07942 1786 aa19.34■□□□□ 0.69
CBX4-204ENST00000495122 ADORA1P30542 326 aa19.33■□□□□ 0.68
CBX4-204ENST00000495122 CTCFP49711 727 aaPredicted RBP19.33■□□□□ 0.68
CBX4-204ENST00000495122 AK2P54819 239 aa19.33■□□□□ 0.68
CBX4-204ENST00000495122 ZNF280AP59817 542 aaPredicted RBP19.33■□□□□ 0.68
CBX4-204ENST00000495122 BLOC1S2Q6QNY1 142 aa19.33■□□□□ 0.68
CBX4-204ENST00000495122 PAXIP1Q6ZW49 1069 aaPredicted RBP19.33■□□□□ 0.68
CBX4-204ENST00000495122 PODNQ7Z5L7 613 aa19.33■□□□□ 0.68
CBX4-204ENST00000495122 USP48Q86UV5 1035 aa19.33■□□□□ 0.68
CBX4-204ENST00000495122 AGBL3Q8NEM8 1001 aa19.33■□□□□ 0.68
CBX4-204ENST00000495122 HHIPL1Q96JK4 782 aa19.33■□□□□ 0.68
CBX4-204ENST00000495122 GMLQ99445 158 aa19.33■□□□□ 0.68
CBX4-204ENST00000495122 ZBTB22O15209 634 aa19.32■□□□□ 0.68
CBX4-204ENST00000495122 MAP2K1Q02750 393 aaPredicted RBP19.32■□□□□ 0.68
CBX4-204ENST00000495122 GSE1Q14687 1217 aa19.32■□□□□ 0.68
CBX4-204ENST00000495122 ZNF408Q9H9D4 720 aa19.32■□□□□ 0.68
CBX4-204ENST00000495122 PRDM10Q9NQV6 1147 aa19.32■□□□□ 0.68
CBX4-204ENST00000495122 CTNNA3Q9UI47 895 aa19.32■□□□□ 0.68
CBX4-204ENST00000495122 USP17L3A6NCW0 530 aa19.31■□□□□ 0.68
CBX4-204ENST00000495122 USP17L4A6NCW7 530 aa19.31■□□□□ 0.68
CBX4-204ENST00000495122 RBM26Q5T8P6 1007 aaKnown RBP19.31■□□□□ 0.68
CBX4-204ENST00000495122 DLK2Q6UY11 383 aa19.31■□□□□ 0.68
CBX4-204ENST00000495122 USP17L1Q7RTZ2 530 aa19.31■□□□□ 0.68
CBX4-204ENST00000495122 KRT26Q7Z3Y9 468 aa19.31■□□□□ 0.68
CBX4-204ENST00000495122 APPBP2Q92624 585 aa19.31■□□□□ 0.68
CBX4-204ENST00000495122 FOXD4L1Q9NU39 408 aa19.31■□□□□ 0.68
CBX4-204ENST00000495122 LEMD3Q9Y2U8 911 aa19.31■□□□□ 0.68
CBX4-204ENST00000495122 ASTN2O75129 1339 aaPredicted RBP19.3■□□□□ 0.68
CBX4-204ENST00000495122 ADM5C9JUS6 153 aa19.3■□□□□ 0.68
CBX4-204ENST00000495122 CAPN15O75808 1086 aa19.3■□□□□ 0.68
CBX4-204ENST00000495122 HSPA8P11142 646 aaKnown RBP19.3■□□□□ 0.68
CBX4-204ENST00000495122 RPS6KB1P23443 525 aa19.3■□□□□ 0.68
CBX4-204ENST00000495122 DCPSQ96C86 337 aaKnown RBP19.3■□□□□ 0.68
CBX4-204ENST00000495122 CHMP4CQ96CF2 233 aa19.3■□□□□ 0.68
CBX4-204ENST00000495122 ANKRD2Q9GZV1 360 aa19.3■□□□□ 0.68
CBX4-204ENST00000495122 GGA3Q9NZ52 723 aa19.3■□□□□ 0.68
CBX4-204ENST00000495122 ZNF804BA4D1E1 1349 aa19.29■□□□□ 0.68
CBX4-204ENST00000495122 MAST3O60307 1309 aa19.29■□□□□ 0.68
CBX4-204ENST00000495122 GRM1Q13255 1194 aa19.29■□□□□ 0.68
CBX4-204ENST00000495122 UBE3CQ15386 1083 aa19.29■□□□□ 0.68
CBX4-204ENST00000495122 CCDC102BQ68D86 513 aa19.29■□□□□ 0.68
CBX4-204ENST00000495122 TXNRD3Q86VQ6 643 aa19.29■□□□□ 0.68
CBX4-204ENST00000495122 ZGPATQ8N5A5 531 aaKnown RBP19.29■□□□□ 0.68
CBX4-204ENST00000495122 COA1Q9GZY4 146 aa19.29■□□□□ 0.68
CBX4-204ENST00000495122 DOCK2Q92608 1830 aa19.29■□□□□ 0.68
CBX4-204ENST00000495122 AOC2O75106 756 aa19.28■□□□□ 0.68
CBX4-204ENST00000495122 BRD1O95696 1058 aa19.28■□□□□ 0.68
CBX4-204ENST00000495122 KLRK1P26718 216 aa19.28■□□□□ 0.68
CBX4-204ENST00000495122 DEKP35659 375 aaKnown RBP19.28■□□□□ 0.68
CBX4-204ENST00000495122 MCAMP43121 646 aa19.28■□□□□ 0.68
CBX4-204ENST00000495122 ZAP70P43403 619 aa19.28■□□□□ 0.68
CBX4-204ENST00000495122 CHRNDQ07001 517 aa19.28■□□□□ 0.68
CBX4-204ENST00000495122 ADCK5Q3MIX3 580 aa19.28■□□□□ 0.68
CBX4-204ENST00000495122 DACT2Q5SW24 774 aa19.28■□□□□ 0.68
CBX4-204ENST00000495122 IRS2Q9Y4H2 1338 aa19.27■□□□□ 0.68
CBX4-204ENST00000495122 IGSF3O75054 1194 aa19.27■□□□□ 0.68
CBX4-204ENST00000495122 BAG4O95429 457 aaKnown RBP19.27■□□□□ 0.68
CBX4-204ENST00000495122 USP17L8P0C7I0 530 aa19.27■□□□□ 0.68
CBX4-204ENST00000495122 MAP2K2P36507 400 aa19.27■□□□□ 0.68
CBX4-204ENST00000495122 LBX1P52954 281 aa19.27■□□□□ 0.68
CBX4-204ENST00000495122 UBE4AQ14139 1066 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms