RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 TERF2IPQ9NYB0 399 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 IMPACTQ9P2X3 320 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 CLIP2Q9UDT6 1046 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 CFDP1Q9UEE9 299 aaPredicted RBP3.17□□□□□ -1.9
MDC1-208ENST00000494654 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.17□□□□□ -1.9
MDC1-208ENST00000494654 ZNF777Q9ULD5 760 aaPredicted RBP3.17□□□□□ -1.9
MDC1-208ENST00000494654 CNPY2Q9Y2B0 182 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 EXOC6BQ9Y2D4 811 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 LTN1O94822 1766 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 RIMS2Q9UQ26 1411 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 AOX1Q06278 1338 aa3.17□□□□□ -1.9
MDC1-208ENST00000494654 MAP3K5Q99683 1374 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 ALKQ9UM73 1620 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 BCORQ6W2J9 1755 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 CPS1P31327 1500 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 ANKRD33BA6NCL7 494 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 CCDC69A6NI79 296 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 USP27XA6NNY8 438 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 H0YHG0 523 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 H3BQF6 201 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 MAP2K7O14733 419 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 POLR3GO15318 223 aaPredicted RBP3.16□□□□□ -1.9
MDC1-208ENST00000494654 FIBPO43427 364 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 NRDCO43847 1150 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 GDF9O60383 454 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 PPFIA4O75335 1185 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 SASH3O75995 380 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 NEFHP12036 1026 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 ELF1P32519 619 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 SARNPP82979 210 aaKnown RBP3.16□□□□□ -1.9
MDC1-208ENST00000494654 EXOSC9Q06265 439 aaKnown RBP3.16□□□□□ -1.9
MDC1-208ENST00000494654 DDR1Q08345 913 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 SF3B2Q13435 895 aaKnown RBP3.16□□□□□ -1.9
MDC1-208ENST00000494654 NEDD9Q14511 834 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 SMC1AQ14683 1233 aaKnown RBP3.16□□□□□ -1.9
MDC1-208ENST00000494654 SART3Q15020 963 aaKnown RBP3.16□□□□□ -1.9
MDC1-208ENST00000494654 BRD3Q15059 726 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 ERCC6LQ2NKX8 1250 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 CCDC144BQ3MJ40 725 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 ANO6Q4KMQ2 910 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 ANKRD45Q5TZF3 282 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 GGT6Q6P531 493 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 GIMAP6Q6P9H5 292 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 KCNV1Q6PIU1 500 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 GBP6Q6ZN66 633 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 C14orf37Q86TY3 774 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 DRC7Q8IY82 874 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 CCDC144CPQ8IYA2 1237 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 TEX11Q8IYF3 940 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 MICALL1Q8N3F8 863 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 GPR161Q8N6U8 529 aaKnown RBP3.16□□□□□ -1.9
MDC1-208ENST00000494654 GIMAP7Q8NHV1 300 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 RNF217Q8TC41 542 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 DNAAF4Q8WXU2 420 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 UBXN4Q92575 508 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 ZNF592Q92610 1267 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 POM121Q96HA1 1249 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 FAXDC2Q96IV6 333 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 CHAMP1Q96JM3 812 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 PPP1R13BQ96KQ4 1090 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 TRIM5Q9C035 493 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 ACBD3Q9H3P7 528 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 CLSTN2Q9H4D0 955 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 OSBPL3Q9H4L5 887 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 CBX8Q9HC52 389 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 GDPD2Q9HCC8 539 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 PDRG1Q9NUG6 133 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 STK26Q9P289 416 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 MCM8Q9UJA3 840 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 ADAM21Q9UKJ8 722 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 TRAK1Q9UPV9 953 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 RREB1Q92766 1687 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 OVOS2A0A0G2JMS6 1433 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 OVOS2A0A0J9YW53 1432 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 KDM6AO15550 1401 aaPredicted RBP3.16□□□□□ -1.9
MDC1-208ENST00000494654 NPHP4O75161 1426 aaPredicted RBP3.16□□□□□ -1.9
MDC1-208ENST00000494654 OVOS2Q6IE36 1432 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 SCN4AP35499 1836 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 DIP2CQ9Y2E4 1556 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 SALL3Q9BXA9 1300 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 TIAM2Q8IVF5 1701 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 MLH3Q9UHC1 1453 aa3.16□□□□□ -1.9
MDC1-208ENST00000494654 RBBP6Q7Z6E9 1792 aaKnown RBP3.15□□□□□ -1.9
MDC1-208ENST00000494654 DOCK2Q92608 1830 aa3.15□□□□□ -1.91
MDC1-208ENST00000494654 MYH11P35749 1972 aa3.15□□□□□ -1.91
MDC1-208ENST00000494654 ANKRD18BA2A2Z9 1011 aa3.15□□□□□ -1.91
MDC1-208ENST00000494654 GOLGA6L9A6NEM1 432 aa3.15□□□□□ -1.91
MDC1-208ENST00000494654 SPDYE5A6NIY4 337 aa3.15□□□□□ -1.91
MDC1-208ENST00000494654 J3QL48 77 aa3.15□□□□□ -1.91
MDC1-208ENST00000494654 ZBTB7BO15156 539 aaPredicted RBP3.15□□□□□ -1.91
MDC1-208ENST00000494654 SRGAP3O43295 1099 aa3.15□□□□□ -1.91
MDC1-208ENST00000494654 STX6O43752 255 aa3.15□□□□□ -1.91
MDC1-208ENST00000494654 SHOX2O60902 331 aaPredicted RBP3.15□□□□□ -1.91
MDC1-208ENST00000494654 ERLIN2O94905 339 aa3.15□□□□□ -1.91
MDC1-208ENST00000494654 SEC31AO94979 1220 aaKnown RBP3.15□□□□□ -1.91
MDC1-208ENST00000494654 GCFC2P16383 781 aaKnown RBP3.15□□□□□ -1.91
MDC1-208ENST00000494654 SDSP20132 328 aa3.15□□□□□ -1.91
MDC1-208ENST00000494654 GPTP24298 496 aa3.15□□□□□ -1.91
MDC1-208ENST00000494654 GGCXP38435 758 aa3.15□□□□□ -1.91
MDC1-208ENST00000494654 USP5P45974 858 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms