RNA–Protein interactions for RNA: ENST00000494245.1

STX1A-212, Transcript of syntaxin 1A, humanhuman

TSL 4

Gene STX1A, Length 565 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-212ENST00000494245 APOBEC3HQ6NTF7 200 aaKnown RBP25.71■■□□□ 1.71
STX1A-212ENST00000494245 ADGRA1Q86SQ6 560 aa25.71■■□□□ 1.71
STX1A-212ENST00000494245 TRPM4Q8TD43 1214 aa25.71■■□□□ 1.71
STX1A-212ENST00000494245 ZNF526Q8TF50 670 aaPredicted RBP25.71■■□□□ 1.71
STX1A-212ENST00000494245 MAGEB6P1A0A0J9YX57 407 aa25.7■■□□□ 1.7
STX1A-212ENST00000494245 CASC1Q6TDU7 716 aa25.7■■□□□ 1.7
STX1A-212ENST00000494245 RUFY2Q8WXA3 655 aa25.7■■□□□ 1.7
STX1A-212ENST00000494245 PRMT6Q96LA8 375 aaPredicted RBP25.7■■□□□ 1.7
STX1A-212ENST00000494245 CDC45O75419 566 aa25.69■■□□□ 1.7
STX1A-212ENST00000494245 CHMLP26374 656 aa25.69■■□□□ 1.7
STX1A-212ENST00000494245 OSBP2Q969R2 916 aa25.69■■□□□ 1.7
STX1A-212ENST00000494245 AIDAQ96BJ3 306 aa25.69■■□□□ 1.7
STX1A-212ENST00000494245 GPBP1L1Q9HC44 474 aaPredicted RBP25.69■■□□□ 1.7
STX1A-212ENST00000494245 AATFQ9NY61 560 aaKnown RBP eCLIP25.69■■□□□ 1.7
STX1A-212ENST00000494245 TMOD2Q9NZR1 351 aa25.69■■□□□ 1.7
STX1A-212ENST00000494245 RAD50Q92878 1312 aa25.68■■□□□ 1.7
STX1A-212ENST00000494245 EGFRP00533 1210 aa25.68■■□□□ 1.7
STX1A-212ENST00000494245 NMIQ13287 307 aaPredicted RBP25.68■■□□□ 1.7
STX1A-212ENST00000494245 MIGA1Q8NAN2 632 aa25.68■■□□□ 1.7
STX1A-212ENST00000494245 NMRK2Q9NPI5 230 aa25.68■■□□□ 1.7
STX1A-212ENST00000494245 PCDHAC2Q9Y5I4 1007 aa25.68■■□□□ 1.7
STX1A-212ENST00000494245 CHGBP05060 677 aa25.67■■□□□ 1.7
STX1A-212ENST00000494245 MFAP1P55081 439 aaKnown RBP25.67■■□□□ 1.7
STX1A-212ENST00000494245 NBPF9Q3BBW0 867 aa25.67■■□□□ 1.7
STX1A-212ENST00000494245 SPDYE2Q495Y8 402 aa25.67■■□□□ 1.7
STX1A-212ENST00000494245 SLFNL1Q499Z3 407 aa25.67■■□□□ 1.7
STX1A-212ENST00000494245 MCMDC2Q4G0Z9 681 aa25.67■■□□□ 1.7
STX1A-212ENST00000494245 ZC3H15Q8WU90 426 aaKnown RBP25.67■■□□□ 1.7
STX1A-212ENST00000494245 RIOK1Q9BRS2 568 aaKnown RBP25.67■■□□□ 1.7
STX1A-212ENST00000494245 PUS7LQ9H0K6 701 aaKnown RBP25.67■■□□□ 1.7
STX1A-212ENST00000494245 USP40Q9NVE5 1235 aa25.67■■□□□ 1.7
STX1A-212ENST00000494245 A0A0D9SFI3 127 aa25.66■■□□□ 1.7
STX1A-212ENST00000494245 MBD4O95243 580 aa25.66■■□□□ 1.7
STX1A-212ENST00000494245 HIRAP54198 1017 aaPredicted RBP25.66■■□□□ 1.7
STX1A-212ENST00000494245 CDC42EP5Q6NZY7 148 aa25.66■■□□□ 1.7
STX1A-212ENST00000494245 FAM227BQ96M60 508 aa25.66■■□□□ 1.7
STX1A-212ENST00000494245 TDRD3Q9H7E2 651 aaKnown RBP25.66■■□□□ 1.7
STX1A-212ENST00000494245 PITPNM2Q9BZ72 1349 aa25.65■■□□□ 1.7
STX1A-212ENST00000494245 RHBDL3P58872 404 aa25.65■■□□□ 1.7
STX1A-212ENST00000494245 DYNLL1P63167 89 aaKnown RBP25.65■■□□□ 1.7
STX1A-212ENST00000494245 EAPPQ56P03 285 aaPredicted RBP25.65■■□□□ 1.7
STX1A-212ENST00000494245 CWC27Q6UX04 472 aaKnown RBP25.65■■□□□ 1.7
STX1A-212ENST00000494245 TEX11Q8IYF3 940 aa25.65■■□□□ 1.7
STX1A-212ENST00000494245 CRNKL1Q9BZJ0 848 aaKnown RBP25.65■■□□□ 1.7
STX1A-212ENST00000494245 ZNF70Q9UC06 446 aaPredicted RBP25.65■■□□□ 1.7
STX1A-212ENST00000494245 NAV1Q8NEY1 1877 aa25.64■■□□□ 1.7
STX1A-212ENST00000494245 POLR2AP24928 1970 aaKnown RBP25.64■■□□□ 1.7
STX1A-212ENST00000494245 M0R2C6 588 aa25.64■■□□□ 1.7
STX1A-212ENST00000494245 GPAA1O43292 621 aa25.64■■□□□ 1.7
STX1A-212ENST00000494245 GNAT2P19087 354 aa25.64■■□□□ 1.7
STX1A-212ENST00000494245 FKBP1CQ5VVH2 108 aa25.64■■□□□ 1.7
STX1A-212ENST00000494245 APOBEC3FQ8IUX4 373 aaKnown RBP25.64■■□□□ 1.7
STX1A-212ENST00000494245 LCORLQ8N3X6 602 aa25.64■■□□□ 1.7
STX1A-212ENST00000494245 SH3RF3Q8TEJ3 882 aaPredicted RBP25.64■■□□□ 1.7
STX1A-212ENST00000494245 SEC62Q99442 399 aaKnown RBP25.64■■□□□ 1.7
STX1A-212ENST00000494245 TNFAIP1Q13829 316 aa25.63■■□□□ 1.69
STX1A-212ENST00000494245 IDI2Q9BXS1 227 aa25.63■■□□□ 1.69
STX1A-212ENST00000494245 ARMT1Q9H993 441 aa25.63■■□□□ 1.69
STX1A-212ENST00000494245 CCDC171Q6TFL3 1326 aa25.63■■□□□ 1.69
STX1A-212ENST00000494245 RPAP1Q9BWH6 1393 aaPredicted RBP25.62■■□□□ 1.69
STX1A-212ENST00000494245 CLRN2A0PK11 232 aa25.62■■□□□ 1.69
STX1A-212ENST00000494245 STRBPQ96SI9 672 aaKnown RBP25.62■■□□□ 1.69
STX1A-212ENST00000494245 VEZTQ9HBM0 779 aa25.62■■□□□ 1.69
STX1A-212ENST00000494245 GGA3Q9NZ52 723 aa25.62■■□□□ 1.69
STX1A-212ENST00000494245 PGAP2Q9UHJ9 254 aa25.62■■□□□ 1.69
STX1A-212ENST00000494245 MYH1P12882 1939 aa25.62■■□□□ 1.69
STX1A-212ENST00000494245 NPM3O75607 178 aaKnown RBP25.61■■□□□ 1.69
STX1A-212ENST00000494245 TNNI2P48788 182 aa25.61■■□□□ 1.69
STX1A-212ENST00000494245 ANGEL2Q5VTE6 544 aaKnown RBP25.61■■□□□ 1.69
STX1A-212ENST00000494245 LDHDQ86WU2 507 aa25.61■■□□□ 1.69
STX1A-212ENST00000494245 DCPSQ96C86 337 aaKnown RBP25.61■■□□□ 1.69
STX1A-212ENST00000494245 USP5P45974 858 aa25.6■■□□□ 1.69
STX1A-212ENST00000494245 CLEC11AQ9Y240 323 aa25.6■■□□□ 1.69
STX1A-212ENST00000494245 SGSM2O43147 1006 aa25.59■■□□□ 1.69
STX1A-212ENST00000494245 ENTPD3O75355 529 aa25.59■■□□□ 1.69
STX1A-212ENST00000494245 WDHD1O75717 1129 aaPredicted RBP25.59■■□□□ 1.69
STX1A-212ENST00000494245 FAM83AQ86UY5 434 aa25.59■■□□□ 1.69
STX1A-212ENST00000494245 DDRGK1Q96HY6 314 aa25.59■■□□□ 1.69
STX1A-212ENST00000494245 ESYT1Q9BSJ8 1104 aa25.59■■□□□ 1.69
STX1A-212ENST00000494245 ATP8A2Q9NTI2 1148 aa25.59■■□□□ 1.69
STX1A-212ENST00000494245 SLC4A4Q9Y6R1 1079 aa25.59■■□□□ 1.69
STX1A-212ENST00000494245 DDX60LQ5H9U9 1706 aaKnown RBP25.59■■□□□ 1.69
STX1A-212ENST00000494245 CCDC129Q6ZRS4 1044 aa25.58■■□□□ 1.69
STX1A-212ENST00000494245 ZNF589Q86UQ0 364 aaPredicted RBP25.58■■□□□ 1.69
STX1A-212ENST00000494245 ZNF784Q8NCA9 323 aaPredicted RBP25.58■■□□□ 1.69
STX1A-212ENST00000494245 TGFBRAP1Q8WUH2 860 aa25.58■■□□□ 1.69
STX1A-212ENST00000494245 PPP2R3BQ9Y5P8 575 aa25.58■■□□□ 1.69
STX1A-212ENST00000494245 BAZ2AQ9UIF9 1905 aaKnown RBP25.58■■□□□ 1.69
STX1A-212ENST00000494245 COL2A1P02458 1487 aaPredicted RBP25.58■■□□□ 1.69
STX1A-212ENST00000494245 ASTN2O75129 1339 aaPredicted RBP25.58■■□□□ 1.69
STX1A-212ENST00000494245 TCP10L2B9ZVM9 353 aa25.57■■□□□ 1.68
STX1A-212ENST00000494245 EIF5BO60841 1220 aaKnown RBP25.57■■□□□ 1.68
STX1A-212ENST00000494245 CACNB3P54284 484 aa25.57■■□□□ 1.68
STX1A-212ENST00000494245 GIMAP6Q6P9H5 292 aa25.57■■□□□ 1.68
STX1A-212ENST00000494245 FLT1P17948 1338 aa25.57■■□□□ 1.68
STX1A-212ENST00000494245 PATL2C9JE40 543 aaKnown RBP25.56■■□□□ 1.68
STX1A-212ENST00000494245 KIF3CO14782 793 aa25.56■■□□□ 1.68
STX1A-212ENST00000494245 PICALMQ13492 652 aa25.56■■□□□ 1.68
STX1A-212ENST00000494245 SULF1Q8IWU6 871 aa25.56■■□□□ 1.68
STX1A-212ENST00000494245 FAM151AQ8WW52 585 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms