RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 NDUFB5O43674 189 aa3.84□□□□□ -1.79
CDC42EP3-205ENST00000494083 GSTM4Q03013 218 aa3.84□□□□□ -1.79
CDC42EP3-205ENST00000494083 FAM46AQ96IP4 442 aaKnown RBP3.84□□□□□ -1.79
CDC42EP3-205ENST00000494083 MYRFLQ96LU7 910 aa3.84□□□□□ -1.79
CDC42EP3-205ENST00000494083 TRIM56Q9BRZ2 755 aaKnown RBP3.84□□□□□ -1.79
CDC42EP3-205ENST00000494083 ABCA8O94911 1581 aa3.84□□□□□ -1.8
CDC42EP3-205ENST00000494083 SOWAHDA6NJG2 315 aa3.84□□□□□ -1.8
CDC42EP3-205ENST00000494083 SGO2Q562F6 1265 aa3.84□□□□□ -1.8
CDC42EP3-205ENST00000494083 TMC7Q7Z402 723 aa3.84□□□□□ -1.8
CDC42EP3-205ENST00000494083 C7orf69Q9H7B7 122 aa3.84□□□□□ -1.8
CDC42EP3-205ENST00000494083 ABCB6Q9NP58 842 aa3.84□□□□□ -1.8
CDC42EP3-205ENST00000494083 KIAA0556O60303 1618 aa3.84□□□□□ -1.8
CDC42EP3-205ENST00000494083 A0A096LPE4 126 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 A0A1W2PPZ6 126 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 FAM177BA6PVY3 158 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 BMP3P12645 472 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 FSTP19883 344 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 RUSC1Q9BVN2 902 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 LIN7BQ9HAP6 207 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 PRDM15P57071 1507 aaPredicted RBP3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 RANGAP1P46060 587 aaPredicted RBP3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 GALNT12Q8IXK2 581 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 BIN2Q9UBW5 565 aaPredicted RBP3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 USP54Q70EL1 1684 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 DUOX2Q9NRD8 1548 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 PTPRGP23470 1445 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 SSTR4P31391 388 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 ARTNQ5T4W7 220 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 RNF208Q9H0X6 261 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 STOML1Q9UBI4 398 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 SHANK2Q9UPX8 1470 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 UHRF1BP1Q6BDS2 1440 aa3.83□□□□□ -1.8
CDC42EP3-205ENST00000494083 SYNMO15061 1565 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 FAAP100Q0VG06 881 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 B4GALNT3Q6L9W6 998 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 FDX2Q6P4F2 183 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 PMEPA1Q969W9 287 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 CCDC74AQ96AQ1 378 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 ZC3H12CQ9C0D7 883 aaKnown RBP3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 CLEC4MQ9H2X3 399 aaPredicted RBP3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 KCNF1Q9H3M0 494 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 ZFP64Q9NPA5 681 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 CLTCQ00610 1675 aaKnown RBP3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 TMEM131LA2VDJ0 1609 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 HYAL3O43820 417 aaPredicted RBP3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 ADAMTS4O75173 837 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 MAOBP27338 520 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 PCDH1Q08174 1060 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 CACTIN-AS1Q8N1I8 211 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 C12orf50Q8NA57 414 aaPredicted RBP3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 TMPRSS13Q9BYE2 586 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 DHX15O43143 795 aaKnown RBP3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 CPNE3O75131 537 aaKnown RBP3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 BEND4Q6ZU67 534 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 FBXL6Q8N531 539 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 GLIS3Q8NEA6 775 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 EHD4Q9H223 541 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 ZNF576Q9H609 170 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 RAXQ9Y2V3 346 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 IVNS1ABPQ9Y6Y0 642 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 CLTCL1P53675 1640 aa3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 SETD1AO15047 1707 aaKnown RBP3.82□□□□□ -1.8
CDC42EP3-205ENST00000494083 NFIAQ12857 509 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 LRP8Q14114 963 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 GRM2Q14416 872 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 CDPF1Q6NVV7 123 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 ZDHHC13Q8IUH4 622 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 WDR89Q96FK6 387 aaPredicted RBP3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 OSGEPQ9NPF4 335 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 PIK3C2BO00750 1634 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 PTPRKQ15262 1439 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 TIAF1O95411 115 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 FAM20CQ8IXL6 584 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 FBLIM1Q8WUP2 373 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 MFSD14AQ96MC6 490 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 CEP41Q9BYV8 373 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 FBXO24O75426 580 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 CD97P48960 835 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 NUTM2GQ5VZR2 741 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 CCER1Q8TC90 406 aaPredicted RBP3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 WNT8BQ93098 351 aa3.81□□□□□ -1.8
CDC42EP3-205ENST00000494083 SYNJ2O15056 1496 aa3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 MADDQ8WXG6 1647 aa3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 EIF2AK4Q9P2K8 1649 aaKnown RBP3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 RBAK-RBAKDNI3L0D1 243 aa3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 DYNC1LI2O43237 492 aaPredicted RBP3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 COL22A1Q8NFW1 1626 aaPredicted RBP3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 SART1O43290 800 aaKnown RBP3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 B3GALT4O96024 378 aa3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 HOXA10P31260 410 aaPredicted RBP3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 FAM105AQ9NUU6 356 aa3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 KDM5AP29375 1690 aaKnown RBP3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 NCOA1Q15788 1441 aa3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 RAPGEF6Q8TEU7 1601 aa3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 MAPK1P28482 360 aa3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 PDE3BQ13370 1112 aa3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 ANKRD34AQ69YU3 496 aa3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 MPRIPQ6WCQ1 1025 aa3.8□□□□□ -1.8
CDC42EP3-205ENST00000494083 C2CD4AQ8NCU7 369 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms