RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 B4E1Z4 1266 aa12.54□□□□□ -0.4
CLCN6-208ENST00000494028 APPP05067 770 aa12.54□□□□□ -0.4
CLCN6-208ENST00000494028 SERPINB2P05120 415 aa12.54□□□□□ -0.4
CLCN6-208ENST00000494028 TDO2P48775 406 aa12.54□□□□□ -0.4
CLCN6-208ENST00000494028 CCT2P78371 535 aaKnown RBP12.54□□□□□ -0.4
CLCN6-208ENST00000494028 VPS37DQ86XT2 251 aa12.54□□□□□ -0.4
CLCN6-208ENST00000494028 STAG1Q8WVM7 1258 aa12.54□□□□□ -0.4
CLCN6-208ENST00000494028 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
CLCN6-208ENST00000494028 DDX11Q96FC9 970 aa12.54□□□□□ -0.4
CLCN6-208ENST00000494028 GRPEL1Q9HAV7 217 aa12.54□□□□□ -0.4
CLCN6-208ENST00000494028 RAI14Q9P0K7 980 aa12.54□□□□□ -0.4
CLCN6-208ENST00000494028 ABCF2Q9UG63 623 aa12.54□□□□□ -0.4
CLCN6-208ENST00000494028 SLC4A4Q9Y6R1 1079 aa12.54□□□□□ -0.4
CLCN6-208ENST00000494028 MAGEB6P1A0A0J9YX57 407 aa12.53□□□□□ -0.4
CLCN6-208ENST00000494028 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
CLCN6-208ENST00000494028 HIBADHP31937 336 aaKnown RBP12.53□□□□□ -0.4
CLCN6-208ENST00000494028 MRE11P49959 708 aa12.53□□□□□ -0.4
CLCN6-208ENST00000494028 CTDSPL2Q05D32 466 aa12.53□□□□□ -0.4
CLCN6-208ENST00000494028 TRDNQ13061 729 aa12.53□□□□□ -0.4
CLCN6-208ENST00000494028 NAA16Q6N069 864 aaPredicted RBP12.53□□□□□ -0.4
CLCN6-208ENST00000494028 C15orf52Q6ZUT6 534 aaKnown RBP12.53□□□□□ -0.4
CLCN6-208ENST00000494028 FERMT3Q86UX7 667 aa12.53□□□□□ -0.4
CLCN6-208ENST00000494028 TXNRD3Q86VQ6 643 aa12.53□□□□□ -0.4
CLCN6-208ENST00000494028 RPGRQ92834 1020 aaKnown RBP12.53□□□□□ -0.4
CLCN6-208ENST00000494028 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLCN6-208ENST00000494028 PANK2Q9BZ23 570 aa12.53□□□□□ -0.4
CLCN6-208ENST00000494028 ANGEL1Q9UNK9 670 aaKnown RBP12.53□□□□□ -0.4
CLCN6-208ENST00000494028 XRCC6P12956 609 aaKnown RBP eCLIP12.52□□□□□ -0.41
CLCN6-208ENST00000494028 UBE2HP62256 183 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 DYNLL1P63167 89 aaKnown RBP12.52□□□□□ -0.41
CLCN6-208ENST00000494028 KRT85P78386 507 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 CHAF1AQ13111 956 aaPredicted RBP12.52□□□□□ -0.41
CLCN6-208ENST00000494028 CSPP1Q1MSJ5 1256 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 AKNAD1Q5T1N1 836 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 TTC6Q86TZ1 520 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 RAB11FIP4Q86YS3 637 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 FAM184AQ8NB25 1140 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 SDR42E1Q8WUS8 393 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 NSUN4Q96CB9 384 aaKnown RBP12.52□□□□□ -0.41
CLCN6-208ENST00000494028 TMEM87BQ96K49 555 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 NACAP1Q9BZK3 213 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 LY9Q9HBG7 655 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 NAP1L2Q9ULW6 460 aaPredicted RBP12.52□□□□□ -0.41
CLCN6-208ENST00000494028 LEMD3Q9Y2U8 911 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 ELP1O95163 1332 aa12.52□□□□□ -0.41
CLCN6-208ENST00000494028 PRDX5P30044 214 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 FOSBP53539 338 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 GPSM2P81274 684 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 MECOMQ03112 1051 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 PPARAQ07869 468 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 FAM173BQ6P4H8 233 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 CHMP4CQ96CF2 233 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 BRIP1Q9BX63 1249 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 CNNM2Q9H8M5 875 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 SENP2Q9HC62 589 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 ANAPC4Q9UJX5 808 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 KIF3AQ9Y496 699 aa12.51□□□□□ -0.41
CLCN6-208ENST00000494028 MYH1P12882 1939 aa12.5□□□□□ -0.41
CLCN6-208ENST00000494028 KLRG2A4D1S0 409 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-208ENST00000494028 PLSCR1O15162 318 aa12.5□□□□□ -0.41
CLCN6-208ENST00000494028 KDM4AO75164 1064 aa12.5□□□□□ -0.41
CLCN6-208ENST00000494028 FDPSP14324 419 aaKnown RBP12.5□□□□□ -0.41
CLCN6-208ENST00000494028 HOXA10P31260 410 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-208ENST00000494028 TMED8Q6PL24 325 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-208ENST00000494028 SGMS1Q86VZ5 419 aa12.5□□□□□ -0.41
CLCN6-208ENST00000494028 TDRD7Q8NHU6 1098 aaKnown RBP12.5□□□□□ -0.41
CLCN6-208ENST00000494028 SYAP1Q96A49 352 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-208ENST00000494028 GPR101Q96P66 508 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-208ENST00000494028 CAMKK2Q96RR4 588 aa12.5□□□□□ -0.41
CLCN6-208ENST00000494028 KRT23Q9C075 422 aa12.5□□□□□ -0.41
CLCN6-208ENST00000494028 ROBO3Q96MS0 1386 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 SYCE3A1L190 88 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 H3BQV1 296 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 TMEM67Q5HYA8 995 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 CCDC183Q5T5S1 534 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 IFFO2Q5TF58 517 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 LRSAM1Q6UWE0 723 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 ZNF804AQ7Z570 1209 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 DEFB132Q7Z7B7 95 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 COL23A1Q86Y22 540 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-208ENST00000494028 IGDCC4Q8TDY8 1250 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 RBM17Q96I25 401 aaKnown RBP12.49□□□□□ -0.41
CLCN6-208ENST00000494028 CRAMP1Q96RY5 1269 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 INCENPQ9NQS7 918 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 MYH8P13535 1937 aa12.49□□□□□ -0.41
CLCN6-208ENST00000494028 PSME4Q14997 1843 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 STK36Q9NRP7 1315 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 GOLGA8AA7E2F4 631 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 IGSF3O75054 1194 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 UFL1O94874 794 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 APBA3O96018 575 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 ATP2B4P23634 1241 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 HMGB2P26583 209 aaKnown RBP12.48□□□□□ -0.41
CLCN6-208ENST00000494028 METAP2P50579 478 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLCN6-208ENST00000494028 GIMAP6Q6P9H5 292 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 MICU3Q86XE3 530 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 LEO1Q8WVC0 666 aaPredicted RBP12.48□□□□□ -0.41
CLCN6-208ENST00000494028 MTA3Q9BTC8 594 aa12.48□□□□□ -0.41
CLCN6-208ENST00000494028 RNF41Q9H4P4 317 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms