RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 GIMAP6Q6P9H5 292 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 MFSD6Q6ZSS7 791 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 IGDCC4Q8TDY8 1250 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 MYH13Q9UKX3 1938 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 HIBADHP31937 336 aaKnown RBP12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 RCAN1P53805 252 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 NFIXQ14938 502 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 UVSSAQ2YD98 709 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 FAM173BQ6P4H8 233 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 CNBD1Q8NA66 436 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 ABCF2Q9UG63 623 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 NPHP1O15259 732 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 PCP11498 1178 aaKnown RBP12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 METAP2P50579 478 aaKnown RBP eCLIP12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 GRAPQ13588 217 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 APOA5Q6Q788 366 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 GRAPLQ8TC17 118 aaPredicted RBP12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 TRIM44Q96DX7 344 aaPredicted RBP12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 BRIP1Q9BX63 1249 aa12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 DDX19AQ9NUU7 478 aaKnown RBP12.63□□□□□ -0.39
PHACTR4-204ENST00000493669 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 C8orf76Q96K31 380 aa12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 RIOK1Q9BRS2 568 aaKnown RBP12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 QTRT2Q9H974 415 aaKnown RBP12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 LY9Q9HBG7 655 aa12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 LRRC4BQ9NT99 713 aa12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 LEMD3Q9Y2U8 911 aa12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 ADD1P35611 737 aaKnown RBP12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 TMEM67Q5HYA8 995 aa12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 TMTC2Q8N394 836 aa12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 PDLIM2Q96JY6 352 aa12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 RCOR1Q9UKL0 485 aa12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 IRS2Q9Y4H2 1338 aa12.62□□□□□ -0.39
PHACTR4-204ENST00000493669 PRKAB2O43741 272 aa12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 BRAPQ7Z569 592 aa12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 MIGA1Q8NAN2 632 aa12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 FBXO18Q8NFZ0 1043 aa12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 TFIP11Q9UBB9 837 aaKnown RBP12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 IQSEC3Q9UPP2 1182 aaPredicted RBP12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 ZBTB43O43298 467 aa12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 CTDSPL2Q05D32 466 aa12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 PPARAQ07869 468 aa12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 C15orf52Q6ZUT6 534 aaKnown RBP12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 ZSWIM5Q9P217 1185 aa12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 KIAA1551Q9HCM1 1747 aa12.61□□□□□ -0.39
PHACTR4-204ENST00000493669 KDM4AO75164 1064 aa12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 HS1BP3Q53T59 392 aa12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 SPTY2D1Q68D10 685 aaPredicted RBP12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 ADGRA1Q86SQ6 560 aa12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 FUCA2Q9BTY2 467 aa12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 STK36Q9NRP7 1315 aa12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 DUOX1Q9NRD9 1551 aa12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 IFIT3O14879 490 aaKnown RBP12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 SYNE3Q6ZMZ3 975 aa12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 NFXL1Q6ZNB6 911 aa12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 NSUN4Q96CB9 384 aaKnown RBP12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 NUP62CLQ9H1M0 184 aa12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 NT5C2P49902 561 aa12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 KRT27Q7Z3Y8 459 aa12.6□□□□□ -0.39
PHACTR4-204ENST00000493669 ERICH2A1L162 156 aa12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 CCDC69A6NI79 296 aa12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 ST5P78524 1137 aa12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 CRY2Q49AN0 593 aa12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 PRR5LQ6MZQ0 368 aa12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 SLC12A7Q9Y666 1083 aa12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 XDHP47989 1333 aa12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 WTIPA6NIX2 430 aaPredicted RBP12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 GOLGA8AA7E2F4 631 aa12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 GYS1P13807 737 aa12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 RBM43Q6ZSC3 357 aaKnown RBP12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 ESR2Q92731 530 aa12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 PGBD1Q96JS3 809 aa12.59□□□□□ -0.39
PHACTR4-204ENST00000493669 CCDC192P0DO97 292 aa12.58□□□□□ -0.39
PHACTR4-204ENST00000493669 LIG1P18858 919 aa12.58□□□□□ -0.39
PHACTR4-204ENST00000493669 KLRK1P26718 216 aa12.58□□□□□ -0.39
PHACTR4-204ENST00000493669 PPP2R5BQ15173 497 aa12.58□□□□□ -0.39
PHACTR4-204ENST00000493669 BICD2Q8TD16 824 aa12.58□□□□□ -0.39
PHACTR4-204ENST00000493669 CLSTN2Q9H4D0 955 aa12.58□□□□□ -0.39
PHACTR4-204ENST00000493669 RTEL1Q9NZ71 1219 aa12.58□□□□□ -0.39
PHACTR4-204ENST00000493669 TACC3Q9Y6A5 838 aa12.58□□□□□ -0.39
PHACTR4-204ENST00000493669 CCDC88AQ3V6T2 1871 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 FGRP09769 529 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 WTAPQ15007 396 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 ILDR1Q86SU0 546 aaPredicted RBP12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 NKX2-3Q8TAU0 364 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 WDR66Q8TBY9 1149 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 WASF1Q92558 559 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 BRWD3Q6RI45 1802 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 CCDC196A0A1B0GTZ2 297 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 YEATS4O95619 227 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 MECOMQ03112 1051 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 NTRK3Q16288 839 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 MICU3Q86XE3 530 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 ZNF384Q8TF68 577 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 RPGRQ92834 1020 aaKnown RBP12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 USP28Q96RU2 1077 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 CRNKL1Q9BZJ0 848 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms