RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ATP5J2-PTCD1G3V325 749 aa12.08□□□□□ -0.48
PRPF3-206ENST00000493553 ADAMTS2O95450 1211 aa12.08□□□□□ -0.48
PRPF3-206ENST00000493553 CYP19A1P11511 503 aaPredicted RBP12.08□□□□□ -0.48
PRPF3-206ENST00000493553 NFKBIBQ15653 356 aa12.08□□□□□ -0.48
PRPF3-206ENST00000493553 VPS72Q15906 364 aa12.08□□□□□ -0.48
PRPF3-206ENST00000493553 TTLL7Q6ZT98 887 aa12.08□□□□□ -0.48
PRPF3-206ENST00000493553 UNC5CLQ8IV45 518 aa12.08□□□□□ -0.48
PRPF3-206ENST00000493553 DNAJC10Q8IXB1 793 aa12.08□□□□□ -0.48
PRPF3-206ENST00000493553 ZBTB38Q8NAP3 1195 aaPredicted RBP12.08□□□□□ -0.48
PRPF3-206ENST00000493553 ANO2Q9NQ90 1003 aa12.08□□□□□ -0.48
PRPF3-206ENST00000493553 AKAP2Q9Y2D5 859 aa12.08□□□□□ -0.48
PRPF3-206ENST00000493553 NWD2Q9ULI1 1742 aa12.08□□□□□ -0.48
PRPF3-206ENST00000493553 SGSM2O43147 1006 aa12.07□□□□□ -0.48
PRPF3-206ENST00000493553 SASH1O94885 1247 aa12.07□□□□□ -0.48
PRPF3-206ENST00000493553 UPP2O95045 317 aa12.07□□□□□ -0.48
PRPF3-206ENST00000493553 ATP5JP18859 108 aa12.07□□□□□ -0.48
PRPF3-206ENST00000493553 RFX5P48382 616 aaPredicted RBP12.07□□□□□ -0.48
PRPF3-206ENST00000493553 PTPN12Q05209 780 aaKnown RBP12.07□□□□□ -0.48
PRPF3-206ENST00000493553 NR1H3Q13133 447 aa12.07□□□□□ -0.48
PRPF3-206ENST00000493553 CCDC57Q2TAC2 916 aa12.07□□□□□ -0.48
PRPF3-206ENST00000493553 LMBR1LQ6UX01 489 aa12.07□□□□□ -0.48
PRPF3-206ENST00000493553 Q6ZVU0 165 aa12.07□□□□□ -0.48
PRPF3-206ENST00000493553 LINC00528Q8N1L1 170 aa12.07□□□□□ -0.48
PRPF3-206ENST00000493553 SHANK3Q9BYB0 1731 aa12.07□□□□□ -0.48
PRPF3-206ENST00000493553 PA2G4Q9UQ80 394 aaKnown RBP12.07□□□□□ -0.48
PRPF3-206ENST00000493553 EYA2O00167 538 aa12.06□□□□□ -0.48
PRPF3-206ENST00000493553 NUCB2P80303 420 aa12.06□□□□□ -0.48
PRPF3-206ENST00000493553 FOXO4P98177 505 aa12.06□□□□□ -0.48
PRPF3-206ENST00000493553 PARP10Q53GL7 1025 aa12.06□□□□□ -0.48
PRPF3-206ENST00000493553 TNNI3KQ59H18 835 aa12.06□□□□□ -0.48
PRPF3-206ENST00000493553 TREML4Q6UXN2 200 aa12.06□□□□□ -0.48
PRPF3-206ENST00000493553 SEPT12Q8IYM1 358 aa12.06□□□□□ -0.48
PRPF3-206ENST00000493553 GBP4Q96PP9 640 aa12.06□□□□□ -0.48
PRPF3-206ENST00000493553 SLKQ9H2G2 1235 aaPredicted RBP12.06□□□□□ -0.48
PRPF3-206ENST00000493553 CCDC9Q9Y3X0 531 aaKnown RBP12.06□□□□□ -0.48
PRPF3-206ENST00000493553 FPGT-TNNI3KV9GXZ4 949 aa12.06□□□□□ -0.48
PRPF3-206ENST00000493553 PDIA4P13667 645 aaKnown RBP12.05□□□□□ -0.48
PRPF3-206ENST00000493553 ZKSCAN1P17029 563 aaPredicted RBP12.05□□□□□ -0.48
PRPF3-206ENST00000493553 HSPA4P34932 840 aa12.05□□□□□ -0.48
PRPF3-206ENST00000493553 MCCD1P59942 119 aaPredicted RBP12.05□□□□□ -0.48
PRPF3-206ENST00000493553 PIP4K2BP78356 416 aa12.05□□□□□ -0.48
PRPF3-206ENST00000493553 RNF20Q5VTR2 975 aa12.05□□□□□ -0.48
PRPF3-206ENST00000493553 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.05□□□□□ -0.48
PRPF3-206ENST00000493553 ZNF592Q92610 1267 aa12.05□□□□□ -0.48
PRPF3-206ENST00000493553 SYTL4Q96C24 671 aaPredicted RBP12.05□□□□□ -0.48
PRPF3-206ENST00000493553 EAF2Q96CJ1 260 aaPredicted RBP12.05□□□□□ -0.48
PRPF3-206ENST00000493553 TSEN34Q9BSV6 310 aaKnown RBP12.05□□□□□ -0.48
PRPF3-206ENST00000493553 CEP126Q9P2H0 1117 aa12.05□□□□□ -0.48
PRPF3-206ENST00000493553 PCDHB9Q9Y5E1 797 aa12.05□□□□□ -0.48
PRPF3-206ENST00000493553 ARFGEF2Q9Y6D5 1785 aa12.05□□□□□ -0.48
PRPF3-206ENST00000493553 GOLGA6L22H0YM25 854 aa12.04□□□□□ -0.48
PRPF3-206ENST00000493553 EPHA10Q5JZY3 1008 aa12.04□□□□□ -0.48
PRPF3-206ENST00000493553 TSHZ3Q63HK5 1081 aa12.04□□□□□ -0.48
PRPF3-206ENST00000493553 NGLY1Q96IV0 654 aa12.04□□□□□ -0.48
PRPF3-206ENST00000493553 TM6SF1Q9BZW5 370 aa12.04□□□□□ -0.48
PRPF3-206ENST00000493553 SIL1Q9H173 461 aa12.04□□□□□ -0.48
PRPF3-206ENST00000493553 CCDC87Q9NVE4 849 aa12.04□□□□□ -0.48
PRPF3-206ENST00000493553 ZNF652Q9Y2D9 606 aa12.04□□□□□ -0.48
PRPF3-206ENST00000493553 CHMP3Q9Y3E7 222 aa12.04□□□□□ -0.48
PRPF3-206ENST00000493553 CSF1RP07333 972 aa12.03□□□□□ -0.48
PRPF3-206ENST00000493553 BMP2P12643 396 aa12.03□□□□□ -0.48
PRPF3-206ENST00000493553 PIP4K2AP48426 406 aaPredicted RBP12.03□□□□□ -0.48
PRPF3-206ENST00000493553 IFIT5Q13325 482 aaKnown RBP12.03□□□□□ -0.48
PRPF3-206ENST00000493553 TAF7LQ5H9L4 462 aa12.03□□□□□ -0.48
PRPF3-206ENST00000493553 C6orf118Q5T5N4 469 aa12.03□□□□□ -0.48
PRPF3-206ENST00000493553 LCE2AQ5TA79 106 aaPredicted RBP12.03□□□□□ -0.48
PRPF3-206ENST00000493553 FNBP4Q8N3X1 1017 aaPredicted RBP12.03□□□□□ -0.48
PRPF3-206ENST00000493553 INTS4Q96HW7 963 aaKnown RBP12.03□□□□□ -0.48
PRPF3-206ENST00000493553 PRM3Q9NNZ6 103 aa12.03□□□□□ -0.48
PRPF3-206ENST00000493553 ZNF330Q9Y3S2 320 aaPredicted RBP12.03□□□□□ -0.48
PRPF3-206ENST00000493553 ABCC12Q96J65 1359 aa12.03□□□□□ -0.48
PRPF3-206ENST00000493553 LOC102724428A0A0B4J2F2 783 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 ERVH48-1M5A8F1 160 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 PSMA5P28066 241 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 DDIT3P35638 169 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 NEK4P51957 841 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 SIK1P57059 783 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 TFCP2Q12800 502 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 CBLBQ13191 982 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 SKOR2Q2VWA4 1001 aaPredicted RBP12.02□□□□□ -0.49
PRPF3-206ENST00000493553 NLRP10Q86W26 655 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 CCDC125Q86Z20 511 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 HAUS7Q99871 368 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 FSD1Q9BTV5 496 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 HMG20BQ9P0W2 317 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 TOGARAM1Q9Y4F4 1720 aa12.02□□□□□ -0.49
PRPF3-206ENST00000493553 NRAPQ86VF7 1730 aa12.01□□□□□ -0.49
PRPF3-206ENST00000493553 TERTO14746 1132 aaKnown RBP12.01□□□□□ -0.49
PRPF3-206ENST00000493553 EIF5P55010 431 aaKnown RBP12.01□□□□□ -0.49
PRPF3-206ENST00000493553 NFX1Q12986 1120 aaKnown RBP12.01□□□□□ -0.49
PRPF3-206ENST00000493553 KRT32Q14532 448 aa12.01□□□□□ -0.49
PRPF3-206ENST00000493553 CCDC158Q5M9N0 1113 aa12.01□□□□□ -0.49
PRPF3-206ENST00000493553 CLEC4GQ6UXB4 293 aa12.01□□□□□ -0.49
PRPF3-206ENST00000493553 MARCH10Q8NA82 808 aaPredicted RBP12.01□□□□□ -0.49
PRPF3-206ENST00000493553 ARXQ96QS3 562 aa12.01□□□□□ -0.49
PRPF3-206ENST00000493553 CCDC8Q9H0W5 538 aaPredicted RBP12.01□□□□□ -0.49
PRPF3-206ENST00000493553 WNK3Q9BYP7 1800 aa12.01□□□□□ -0.49
PRPF3-206ENST00000493553 NUP188Q5SRE5 1749 aa12□□□□□ -0.49
PRPF3-206ENST00000493553 ANKRD18BA2A2Z9 1011 aa12□□□□□ -0.49
PRPF3-206ENST00000493553 PDE8AO60658 829 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms