RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 BRI3BPQ8WY22 251 aa27.49■■□□□ 1.99
LYSMD4-208ENST00000493256 CLUAP1Q96AJ1 413 aa27.49■■□□□ 1.99
LYSMD4-208ENST00000493256 HOOK2Q96ED9 719 aa27.49■■□□□ 1.99
LYSMD4-208ENST00000493256 OTUD5Q96G74 571 aa27.49■■□□□ 1.99
LYSMD4-208ENST00000493256 WRNIP1Q96S55 665 aa27.49■■□□□ 1.99
LYSMD4-208ENST00000493256 SNCAIPQ9Y6H5 919 aa27.49■■□□□ 1.99
LYSMD4-208ENST00000493256 TNRC18O15417 2968 aaPredicted RBP27.48■■□□□ 1.99
LYSMD4-208ENST00000493256 TFCP2Q12800 502 aa27.48■■□□□ 1.99
LYSMD4-208ENST00000493256 MIER1Q8N108 512 aa27.48■■□□□ 1.99
LYSMD4-208ENST00000493256 FAM151AQ8WW52 585 aa27.48■■□□□ 1.99
LYSMD4-208ENST00000493256 SPDYE5A6NIY4 337 aa27.47■■□□□ 1.99
LYSMD4-208ENST00000493256 GNAI2P04899 355 aa27.47■■□□□ 1.99
LYSMD4-208ENST00000493256 RASGRF1Q13972 1273 aa27.47■■□□□ 1.99
LYSMD4-208ENST00000493256 ZKSCAN4Q969J2 545 aaPredicted RBP27.47■■□□□ 1.99
LYSMD4-208ENST00000493256 CCL15-CCL14A0A0B4J2E2 113 aa27.46■■□□□ 1.99
LYSMD4-208ENST00000493256 A0A1B0GUL7 405 aa27.46■■□□□ 1.99
LYSMD4-208ENST00000493256 GTF2A2P52657 109 aa27.46■■□□□ 1.99
LYSMD4-208ENST00000493256 NFIAQ12857 509 aa27.46■■□□□ 1.99
LYSMD4-208ENST00000493256 CCL15Q16663 113 aa27.46■■□□□ 1.99
LYSMD4-208ENST00000493256 DCAF15Q66K64 600 aa27.46■■□□□ 1.99
LYSMD4-208ENST00000493256 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.46■■□□□ 1.99
LYSMD4-208ENST00000493256 HNRNPUQ00839 825 aaKnown RBP eCLIP27.45■■□□□ 1.98
LYSMD4-208ENST00000493256 TCP10Q12799 353 aa27.45■■□□□ 1.98
LYSMD4-208ENST00000493256 MIGA2Q7L4E1 593 aa27.45■■□□□ 1.98
LYSMD4-208ENST00000493256 XAGE2Q96GT9 111 aa27.45■■□□□ 1.98
LYSMD4-208ENST00000493256 AKAP2Q9Y2D5 859 aa27.45■■□□□ 1.98
LYSMD4-208ENST00000493256 MYH2Q9UKX2 1941 aa27.45■■□□□ 1.98
LYSMD4-208ENST00000493256 OTOP1Q7RTM1 612 aa27.44■■□□□ 1.98
LYSMD4-208ENST00000493256 ERO1BQ86YB8 467 aa27.44■■□□□ 1.98
LYSMD4-208ENST00000493256 ZGPATQ8N5A5 531 aaKnown RBP27.44■■□□□ 1.98
LYSMD4-208ENST00000493256 ZNF341Q9BYN7 854 aa27.44■■□□□ 1.98
LYSMD4-208ENST00000493256 USP40Q9NVE5 1235 aa27.44■■□□□ 1.98
LYSMD4-208ENST00000493256 FAM198AQ9UFP1 575 aa27.44■■□□□ 1.98
LYSMD4-208ENST00000493256 TRIM17Q9Y577 477 aa27.44■■□□□ 1.98
LYSMD4-208ENST00000493256 PDS5AQ29RF7 1337 aaKnown RBP27.43■■□□□ 1.98
LYSMD4-208ENST00000493256 AK9Q5TCS8 1911 aa27.43■■□□□ 1.98
LYSMD4-208ENST00000493256 HTTP42858 3142 aa27.43■■□□□ 1.98
LYSMD4-208ENST00000493256 PNMA6EA0A0J9YXQ4 647 aa27.43■■□□□ 1.98
LYSMD4-208ENST00000493256 TMEM57Q8N5G2 664 aa27.43■■□□□ 1.98
LYSMD4-208ENST00000493256 CD99L2Q8TCZ2 262 aa27.43■■□□□ 1.98
LYSMD4-208ENST00000493256 ERO1AQ96HE7 468 aa27.43■■□□□ 1.98
LYSMD4-208ENST00000493256 PDE4DIPQ5VU43 2346 aa27.42■■□□□ 1.98
LYSMD4-208ENST00000493256 MVPQ14764 893 aaKnown RBP27.42■■□□□ 1.98
LYSMD4-208ENST00000493256 ZKSCAN2Q63HK3 967 aa27.42■■□□□ 1.98
LYSMD4-208ENST00000493256 FAM43AQ8N2R8 423 aa27.42■■□□□ 1.98
LYSMD4-208ENST00000493256 GAKO14976 1311 aa27.41■■□□□ 1.98
LYSMD4-208ENST00000493256 INPP5BP32019 993 aa27.41■■□□□ 1.98
LYSMD4-208ENST00000493256 TAF1CQ15572 869 aaPredicted RBP27.41■■□□□ 1.98
LYSMD4-208ENST00000493256 ABCF2Q9UG63 623 aa27.41■■□□□ 1.98
LYSMD4-208ENST00000493256 IRF6O14896 467 aa27.4■■□□□ 1.98
LYSMD4-208ENST00000493256 SP3Q02447 781 aa27.4■■□□□ 1.98
LYSMD4-208ENST00000493256 PPIL2Q13356 520 aa27.4■■□□□ 1.98
LYSMD4-208ENST00000493256 DIEXFQ68CQ4 756 aaKnown RBP27.4■■□□□ 1.98
LYSMD4-208ENST00000493256 DZIP1Q86YF9 867 aaKnown RBP27.4■■□□□ 1.98
LYSMD4-208ENST00000493256 ZFPM1Q8IX07 1006 aa27.4■■□□□ 1.98
LYSMD4-208ENST00000493256 NEUROD6Q96NK8 337 aa27.4■■□□□ 1.98
LYSMD4-208ENST00000493256 ZNF112Q9UJU3 913 aa27.4■■□□□ 1.98
LYSMD4-208ENST00000493256 CETPP11597 493 aa27.39■■□□□ 1.98
LYSMD4-208ENST00000493256 CAP1Q01518 475 aa27.39■■□□□ 1.98
LYSMD4-208ENST00000493256 RFX7Q2KHR2 1363 aa27.38■■□□□ 1.97
LYSMD4-208ENST00000493256 SNAPC2Q13487 334 aa27.38■■□□□ 1.97
LYSMD4-208ENST00000493256 SPTY2D1Q68D10 685 aaPredicted RBP27.38■■□□□ 1.97
LYSMD4-208ENST00000493256 ZFYVE28Q9HCC9 887 aa27.38■■□□□ 1.97
LYSMD4-208ENST00000493256 RGS3P49796 1198 aa27.37■■□□□ 1.97
LYSMD4-208ENST00000493256 PPATQ06203 517 aa27.37■■□□□ 1.97
LYSMD4-208ENST00000493256 G3BP1Q13283 466 aaKnown RBP eCLIP27.37■■□□□ 1.97
LYSMD4-208ENST00000493256 FAM163AQ96GL9 167 aaPredicted RBP27.37■■□□□ 1.97
LYSMD4-208ENST00000493256 IDI2Q9BXS1 227 aa27.37■■□□□ 1.97
LYSMD4-208ENST00000493256 ATRNL1Q5VV63 1379 aa27.36■■□□□ 1.97
LYSMD4-208ENST00000493256 BTBD19C9JJ37 291 aa27.36■■□□□ 1.97
LYSMD4-208ENST00000493256 PI16Q6UXB8 463 aa27.36■■□□□ 1.97
LYSMD4-208ENST00000493256 SLF2Q8IX21 1173 aa27.36■■□□□ 1.97
LYSMD4-208ENST00000493256 EFCC1Q9HA90 598 aa27.36■■□□□ 1.97
LYSMD4-208ENST00000493256 HMG20BQ9P0W2 317 aa27.36■■□□□ 1.97
LYSMD4-208ENST00000493256 DOCK2Q92608 1830 aa27.35■■□□□ 1.97
LYSMD4-208ENST00000493256 GORABQ5T7V8 394 aa27.35■■□□□ 1.97
LYSMD4-208ENST00000493256 PTPN22Q9Y2R2 807 aa27.35■■□□□ 1.97
LYSMD4-208ENST00000493256 MROH7-TTC4A0A0A0MT08 1334 aa27.35■■□□□ 1.97
LYSMD4-208ENST00000493256 ENTPD3O75355 529 aa27.34■■□□□ 1.97
LYSMD4-208ENST00000493256 BTDP43251 543 aa27.34■■□□□ 1.97
LYSMD4-208ENST00000493256 MECOMQ03112 1051 aa27.34■■□□□ 1.97
LYSMD4-208ENST00000493256 POLA2Q14181 598 aa27.34■■□□□ 1.97
LYSMD4-208ENST00000493256 NOL9Q5SY16 702 aaKnown RBP27.34■■□□□ 1.97
LYSMD4-208ENST00000493256 ERICH6Q7L0X2 663 aa27.34■■□□□ 1.97
LYSMD4-208ENST00000493256 ZNF384Q8TF68 577 aa27.34■■□□□ 1.97
LYSMD4-208ENST00000493256 ZCCHC17Q9NP64 241 aaKnown RBP27.34■■□□□ 1.97
LYSMD4-208ENST00000493256 WDHD1O75717 1129 aaPredicted RBP27.33■■□□□ 1.97
LYSMD4-208ENST00000493256 ARID4AP29374 1257 aaPredicted RBP27.33■■□□□ 1.97
LYSMD4-208ENST00000493256 SH3BP5LQ7L8J4 393 aa27.33■■□□□ 1.97
LYSMD4-208ENST00000493256 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.33■■□□□ 1.97
LYSMD4-208ENST00000493256 SPATA5Q8NB90 893 aa27.33■■□□□ 1.97
LYSMD4-208ENST00000493256 DDX4Q9NQI0 724 aaKnown RBP27.33■■□□□ 1.97
LYSMD4-208ENST00000493256 FTSJ3Q8IY81 847 aaKnown RBP27.32■■□□□ 1.96
LYSMD4-208ENST00000493256 C1orf115Q9H7X2 142 aa27.32■■□□□ 1.96
LYSMD4-208ENST00000493256 KCNH4Q9UQ05 1017 aa27.32■■□□□ 1.96
LYSMD4-208ENST00000493256 TLR2O60603 784 aa27.31■■□□□ 1.96
LYSMD4-208ENST00000493256 RLBP1P12271 317 aa27.31■■□□□ 1.96
LYSMD4-208ENST00000493256 TBC1D9Q6ZT07 1266 aa27.31■■□□□ 1.96
LYSMD4-208ENST00000493256 SSH3Q8TE77 659 aa27.31■■□□□ 1.96
LYSMD4-208ENST00000493256 GPR75-ASB3A0A0A6YYF3 556 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms