RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ZFYVE28Q9HCC9 887 aa15.42■□□□□ 0.06
COL6A1-205ENST00000492851 ZCCHC17Q9NP64 241 aaKnown RBP15.42■□□□□ 0.06
COL6A1-205ENST00000492851 PA2G4Q9UQ80 394 aaKnown RBP15.42■□□□□ 0.06
COL6A1-205ENST00000492851 CCL15-CCL14A0A0B4J2E2 113 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 CETPP11597 493 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 TRIM27P14373 513 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 PHKA1P46020 1223 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 TIMM10P62072 90 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 SP3Q02447 781 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 CRHR2Q13324 411 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 CCL15Q16663 113 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 ZKSCAN2Q63HK3 967 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 CDC42EP5Q6NZY7 148 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 CDAN1Q8IWY9 1227 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 OTUD5Q96G74 571 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 USP40Q9NVE5 1235 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 DAGLAQ9Y4D2 1042 aa15.41■□□□□ 0.06
COL6A1-205ENST00000492851 A0A1B0GUL7 405 aa15.4■□□□□ 0.06
COL6A1-205ENST00000492851 PRDX5P30044 214 aa15.4■□□□□ 0.06
COL6A1-205ENST00000492851 PPATQ06203 517 aa15.4■□□□□ 0.06
COL6A1-205ENST00000492851 G3BP1Q13283 466 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL6A1-205ENST00000492851 SNAPC2Q13487 334 aa15.4■□□□□ 0.06
COL6A1-205ENST00000492851 FAM163AQ96GL9 167 aaPredicted RBP15.4■□□□□ 0.06
COL6A1-205ENST00000492851 TRIM17Q9Y577 477 aa15.4■□□□□ 0.06
COL6A1-205ENST00000492851 BCAR3O75815 825 aa15.39■□□□□ 0.05
COL6A1-205ENST00000492851 SOX10P56693 466 aa15.39■□□□□ 0.05
COL6A1-205ENST00000492851 TFCP2Q12800 502 aa15.39■□□□□ 0.05
COL6A1-205ENST00000492851 PPIL2Q13356 520 aa15.39■□□□□ 0.05
COL6A1-205ENST00000492851 DIXDC1Q155Q3 683 aa15.39■□□□□ 0.05
COL6A1-205ENST00000492851 GORABQ5T7V8 394 aa15.39■□□□□ 0.05
COL6A1-205ENST00000492851 DZIP1Q86YF9 867 aaKnown RBP15.39■□□□□ 0.05
COL6A1-205ENST00000492851 XAGE2Q96GT9 111 aa15.39■□□□□ 0.05
COL6A1-205ENST00000492851 NEUROD6Q96NK8 337 aa15.39■□□□□ 0.05
COL6A1-205ENST00000492851 ENTPD3O75355 529 aa15.38■□□□□ 0.05
COL6A1-205ENST00000492851 MAP4K4O95819 1239 aaPredicted RBP15.38■□□□□ 0.05
COL6A1-205ENST00000492851 GSTO1P78417 241 aa15.38■□□□□ 0.05
COL6A1-205ENST00000492851 TAF1CQ15572 869 aaPredicted RBP15.38■□□□□ 0.05
COL6A1-205ENST00000492851 MIGA2Q7L4E1 593 aa15.38■□□□□ 0.05
COL6A1-205ENST00000492851 OTOP1Q7RTM1 612 aa15.38■□□□□ 0.05
COL6A1-205ENST00000492851 BRI3BPQ8WY22 251 aa15.38■□□□□ 0.05
COL6A1-205ENST00000492851 ZKSCAN4Q969J2 545 aaPredicted RBP15.38■□□□□ 0.05
COL6A1-205ENST00000492851 IDI2Q9BXS1 227 aa15.38■□□□□ 0.05
COL6A1-205ENST00000492851 EFCC1Q9HA90 598 aa15.38■□□□□ 0.05
COL6A1-205ENST00000492851 ABCF2Q9UG63 623 aa15.38■□□□□ 0.05
COL6A1-205ENST00000492851 ZNF112Q9UJU3 913 aa15.38■□□□□ 0.05
COL6A1-205ENST00000492851 SNCAIPQ9Y6H5 919 aa15.38■□□□□ 0.05
COL6A1-205ENST00000492851 LDHCP07864 332 aa15.37■□□□□ 0.05
COL6A1-205ENST00000492851 ADORA1P30542 326 aa15.37■□□□□ 0.05
COL6A1-205ENST00000492851 HNRNPUQ00839 825 aaKnown RBP eCLIP15.37■□□□□ 0.05
COL6A1-205ENST00000492851 TCP10Q12799 353 aa15.37■□□□□ 0.05
COL6A1-205ENST00000492851 RASGRF1Q13972 1273 aa15.37■□□□□ 0.05
COL6A1-205ENST00000492851 ERICH6Q7L0X2 663 aa15.37■□□□□ 0.05
COL6A1-205ENST00000492851 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
COL6A1-205ENST00000492851 CLUAP1Q96AJ1 413 aa15.37■□□□□ 0.05
COL6A1-205ENST00000492851 GAKO14976 1311 aa15.37■□□□□ 0.05
COL6A1-205ENST00000492851 IRF6O14896 467 aa15.36■□□□□ 0.05
COL6A1-205ENST00000492851 IGSF3O75054 1194 aa15.36■□□□□ 0.05
COL6A1-205ENST00000492851 UQCRFS1P1P0C7P4 283 aa15.36■□□□□ 0.05
COL6A1-205ENST00000492851 NFIAQ12857 509 aa15.36■□□□□ 0.05
COL6A1-205ENST00000492851 KIF22Q14807 665 aa15.36■□□□□ 0.05
COL6A1-205ENST00000492851 DIEXFQ68CQ4 756 aaKnown RBP15.36■□□□□ 0.05
COL6A1-205ENST00000492851 FTSJ3Q8IY81 847 aaKnown RBP15.36■□□□□ 0.05
COL6A1-205ENST00000492851 FAM198AQ9UFP1 575 aa15.36■□□□□ 0.05
COL6A1-205ENST00000492851 PTPN22Q9Y2R2 807 aa15.36■□□□□ 0.05
COL6A1-205ENST00000492851 LAMB1P07942 1786 aa15.36■□□□□ 0.05
COL6A1-205ENST00000492851 TLR2O60603 784 aa15.35■□□□□ 0.05
COL6A1-205ENST00000492851 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
COL6A1-205ENST00000492851 GNRH1P01148 92 aa15.35■□□□□ 0.05
COL6A1-205ENST00000492851 NOL9Q5SY16 702 aaKnown RBP15.35■□□□□ 0.05
COL6A1-205ENST00000492851 FAM43AQ8N2R8 423 aa15.35■□□□□ 0.05
COL6A1-205ENST00000492851 TMEM57Q8N5G2 664 aa15.35■□□□□ 0.05
COL6A1-205ENST00000492851 SPATA5Q8NB90 893 aa15.35■□□□□ 0.05
COL6A1-205ENST00000492851 CD99L2Q8TCZ2 262 aa15.35■□□□□ 0.05
COL6A1-205ENST00000492851 GPR108Q9NPR9 543 aa15.35■□□□□ 0.05
COL6A1-205ENST00000492851 GPR75-ASB3A0A0A6YYF3 556 aa15.34■□□□□ 0.05
COL6A1-205ENST00000492851 CXCL11O14625 94 aa15.34■□□□□ 0.05
COL6A1-205ENST00000492851 INPP5BP32019 993 aa15.34■□□□□ 0.05
COL6A1-205ENST00000492851 ATP8B2P98198 1209 aa15.34■□□□□ 0.05
COL6A1-205ENST00000492851 NBPF11Q86T75 865 aa15.34■□□□□ 0.05
COL6A1-205ENST00000492851 ZSCAN29Q8IWY8 852 aaPredicted RBP15.34■□□□□ 0.05
COL6A1-205ENST00000492851 MIER1Q8N108 512 aa15.34■□□□□ 0.05
COL6A1-205ENST00000492851 PNMA6EA0A0J9YXQ4 647 aa15.33■□□□□ 0.04
COL6A1-205ENST00000492851 BTBD19C9JJ37 291 aa15.33■□□□□ 0.04
COL6A1-205ENST00000492851 RGS3P49796 1198 aa15.33■□□□□ 0.04
COL6A1-205ENST00000492851 MAP3K10Q02779 954 aa15.33■□□□□ 0.04
COL6A1-205ENST00000492851 MECOMQ03112 1051 aa15.33■□□□□ 0.04
COL6A1-205ENST00000492851 CCDC158Q5M9N0 1113 aa15.33■□□□□ 0.04
COL6A1-205ENST00000492851 ANKRD23Q86SG2 305 aa15.33■□□□□ 0.04
COL6A1-205ENST00000492851 PICK1Q9NRD5 415 aa15.33■□□□□ 0.04
COL6A1-205ENST00000492851 HMG20BQ9P0W2 317 aa15.33■□□□□ 0.04
COL6A1-205ENST00000492851 KCNH4Q9UQ05 1017 aa15.33■□□□□ 0.04
COL6A1-205ENST00000492851 MROH7-TTC4A0A0A0MT08 1334 aa15.33■□□□□ 0.04
COL6A1-205ENST00000492851 MS4A1P11836 297 aa15.32■□□□□ 0.04
COL6A1-205ENST00000492851 ARID4AP29374 1257 aaPredicted RBP15.32■□□□□ 0.04
COL6A1-205ENST00000492851 BTDP43251 543 aa15.32■□□□□ 0.04
COL6A1-205ENST00000492851 PRMT2P55345 433 aa15.32■□□□□ 0.04
COL6A1-205ENST00000492851 OS9Q13438 667 aaPredicted RBP15.32■□□□□ 0.04
COL6A1-205ENST00000492851 POLA2Q14181 598 aa15.32■□□□□ 0.04
COL6A1-205ENST00000492851 FASTKD5Q7L8L6 764 aaKnown RBP15.32■□□□□ 0.04
COL6A1-205ENST00000492851 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms