RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 RBM8AQ9Y5S9 174 aaKnown RBP11.04□□□□□ -0.64
VPS8-225ENST00000492449 PIK3C2BO00750 1634 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 CTAGE9A4FU28 777 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 SLC27A2O14975 620 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 KIF5CO60282 957 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 MYL5Q02045 173 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 SLC5A9Q2M3M2 681 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 CCDC40Q4G0X9 1142 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 USP28Q96RU2 1077 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 NAA15Q9BXJ9 866 aaKnown RBP11.04□□□□□ -0.64
VPS8-225ENST00000492449 INTS13Q9NVM9 706 aa11.04□□□□□ -0.64
VPS8-225ENST00000492449 GOLGA8KD6RF30 607 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 SNUPNO95149 360 aaKnown RBP11.03□□□□□ -0.64
VPS8-225ENST00000492449 SERPINC1P01008 464 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 HMOX1P09601 288 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 EZRP15311 586 aaKnown RBP11.03□□□□□ -0.64
VPS8-225ENST00000492449 GGCXP38435 758 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 POLA2Q14181 598 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 CFAP100Q494V2 611 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 MICAL1Q8TDZ2 1067 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 MYO1AQ9UBC5 1043 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 TUBE1Q9UJT0 475 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 CEP170BQ9Y4F5 1589 aaPredicted RBP11.03□□□□□ -0.64
VPS8-225ENST00000492449 SLC4A2P04920 1241 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 SLC3A2P08195 630 aaKnown RBP11.03□□□□□ -0.64
VPS8-225ENST00000492449 EPB41P11171 864 aaKnown RBP11.03□□□□□ -0.64
VPS8-225ENST00000492449 USP14P54578 494 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 DCTN1Q14203 1278 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 RBBP5Q15291 538 aaKnown RBP11.03□□□□□ -0.64
VPS8-225ENST00000492449 SNCBQ16143 134 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 TCP11Q8WWU5 503 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 PANX2Q96RD6 677 aa11.03□□□□□ -0.64
VPS8-225ENST00000492449 SRRM3A6NNA2 597 aaPredicted RBP11.02□□□□□ -0.64
VPS8-225ENST00000492449 TMEM232C9JQI7 657 aa11.02□□□□□ -0.64
VPS8-225ENST00000492449 JAK2O60674 1132 aa11.02□□□□□ -0.64
VPS8-225ENST00000492449 GLRX3O76003 335 aaKnown RBP11.02□□□□□ -0.64
VPS8-225ENST00000492449 SLC8A1P32418 973 aa11.02□□□□□ -0.64
VPS8-225ENST00000492449 PRPHP41219 470 aa11.02□□□□□ -0.64
VPS8-225ENST00000492449 GNGT1P63211 74 aa11.02□□□□□ -0.64
VPS8-225ENST00000492449 PDCD2Q16342 344 aaPredicted RBP11.02□□□□□ -0.64
VPS8-225ENST00000492449 TTLL7Q6ZT98 887 aa11.02□□□□□ -0.64
VPS8-225ENST00000492449 CCDC148Q8NFR7 591 aa11.02□□□□□ -0.64
VPS8-225ENST00000492449 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.02□□□□□ -0.64
VPS8-225ENST00000492449 RTEL1Q9NZ71 1219 aa11.02□□□□□ -0.64
VPS8-225ENST00000492449 PCDHA7Q9UN72 937 aa11.02□□□□□ -0.64
VPS8-225ENST00000492449 AGLP35573 1532 aa11.02□□□□□ -0.65
VPS8-225ENST00000492449 ZNF202O95125 648 aa11.02□□□□□ -0.65
VPS8-225ENST00000492449 PECAM1P16284 738 aaPredicted RBP11.02□□□□□ -0.65
VPS8-225ENST00000492449 NDUFA8P51970 172 aa11.02□□□□□ -0.65
VPS8-225ENST00000492449 GOLGA8FQ08AF8 430 aa11.02□□□□□ -0.65
VPS8-225ENST00000492449 GOLGA8DPQ0D2H9 430 aa11.02□□□□□ -0.65
VPS8-225ENST00000492449 KARSQ15046 597 aaKnown RBP11.02□□□□□ -0.65
VPS8-225ENST00000492449 RHPN1Q8TCX5 695 aa11.02□□□□□ -0.65
VPS8-225ENST00000492449 HMG20BQ9P0W2 317 aa11.02□□□□□ -0.65
VPS8-225ENST00000492449 ADGRG1Q9Y653 693 aa11.02□□□□□ -0.65
VPS8-225ENST00000492449 LAMA4Q16363 1823 aa11.02□□□□□ -0.65
VPS8-225ENST00000492449 FAM83GA6ND36 823 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 ME1P48163 572 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 RPS6KA3P51812 740 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 AMPD2Q01433 879 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 SPECC1LQ69YQ0 1117 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 KIAA1328Q86T90 577 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 HOOK2Q96ED9 719 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 ACTR5Q9H9F9 607 aaPredicted RBP11.01□□□□□ -0.65
VPS8-225ENST00000492449 SLC40A1Q9NP59 571 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 ARAP3Q8WWN8 1544 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 EME2A4GXA9 379 aaPredicted RBP11.01□□□□□ -0.65
VPS8-225ENST00000492449 EMC10Q5UCC4 262 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 RASGRP2Q7LDG7 609 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 TAX1BP1Q86VP1 789 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 PARP9Q8IXQ6 854 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 NOA1Q8NC60 698 aaKnown RBP11.01□□□□□ -0.65
VPS8-225ENST00000492449 NAPGQ99747 312 aaPredicted RBP11.01□□□□□ -0.65
VPS8-225ENST00000492449 IL1RAPL2Q9NP60 686 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 OVOS2A0A0G2JMS6 1433 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 OVOS2A0A0J9YW53 1432 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 OVOS2Q6IE36 1432 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 HIP1O00291 1037 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 COQ9O75208 318 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 NAP1L1P55209 391 aaKnown RBP11.01□□□□□ -0.65
VPS8-225ENST00000492449 IFFO1Q0D2I5 559 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 MTX1Q13505 466 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 FILIP1LQ4L180 1135 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 FAM228AQ86W67 206 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 CCDC13Q8IYE1 715 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 CRACR2AQ9BSW2 395 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 IRX2Q9BZI1 471 aaPredicted RBP11.01□□□□□ -0.65
VPS8-225ENST00000492449 FTOQ9C0B1 505 aaKnown RBP eCLIP11.01□□□□□ -0.65
VPS8-225ENST00000492449 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
VPS8-225ENST00000492449 CRB1P82279 1406 aa11.01□□□□□ -0.65
VPS8-225ENST00000492449 GCKP35557 465 aa11□□□□□ -0.65
VPS8-225ENST00000492449 CEBPZQ03701 1054 aaKnown RBP11□□□□□ -0.65
VPS8-225ENST00000492449 OR8K1Q8NGG5 319 aa11□□□□□ -0.65
VPS8-225ENST00000492449 RUBCNQ92622 972 aa11□□□□□ -0.65
VPS8-225ENST00000492449 FBXW7Q969H0 707 aa11□□□□□ -0.65
VPS8-225ENST00000492449 ATP7AQ04656 1500 aa11□□□□□ -0.65
VPS8-225ENST00000492449 F6X3S4 739 aa11□□□□□ -0.65
VPS8-225ENST00000492449 NDUFAB1O14561 156 aa11□□□□□ -0.65
VPS8-225ENST00000492449 FECHP22830 423 aa11□□□□□ -0.65
VPS8-225ENST00000492449 CDR1P51861 262 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms