RNA–Protein interactions for RNA: ENST00000492418.1

TMC1-205, Transcript of transmembrane channel like 1, human

TSL 3

Gene TMC1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC1-205	ENST00000492418	DLK2	Q6UY11	383 aa		13.58	□□□□□ -0.24
TMC1-205	ENST00000492418	ARMC9	Q7Z3E5	817 aa		13.58	□□□□□ -0.24
TMC1-205	ENST00000492418	NSUN4	Q96CB9	384 aa	Known RBP	13.58	□□□□□ -0.24
TMC1-205	ENST00000492418	FAM163A	Q96GL9	167 aa	Predicted RBP	13.58	□□□□□ -0.24
TMC1-205	ENST00000492418	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
TMC1-205	ENST00000492418	BOLA2	Q9H3K6	86 aa		13.58	□□□□□ -0.24
TMC1-205	ENST00000492418	MKRN1	Q9UHC7	482 aa	Known RBP	13.58	□□□□□ -0.24
TMC1-205	ENST00000492418	MROH7-TTC4	A0A0A0MT08	1334 aa		13.58	□□□□□ -0.24
TMC1-205	ENST00000492418	MAP4K4	O95819	1239 aa	Predicted RBP	13.57	□□□□□ -0.24
TMC1-205	ENST00000492418	PLCG2	P16885	1265 aa		13.57	□□□□□ -0.24
TMC1-205	ENST00000492418	BTD	P43251	543 aa		13.57	□□□□□ -0.24
TMC1-205	ENST00000492418	CACNB3	P54284	484 aa		13.57	□□□□□ -0.24
TMC1-205	ENST00000492418	GRM1	Q13255	1194 aa		13.57	□□□□□ -0.24
TMC1-205	ENST00000492418	FAM83A	Q86UY5	434 aa		13.57	□□□□□ -0.24
TMC1-205	ENST00000492418	PIH1D3	Q9NQM4	214 aa	Known RBP	13.57	□□□□□ -0.24
TMC1-205	ENST00000492418	PAG1	Q9NWQ8	432 aa		13.57	□□□□□ -0.24
TMC1-205	ENST00000492418	TLL2	Q9Y6L7	1015 aa		13.57	□□□□□ -0.24
TMC1-205	ENST00000492418	GPR75-ASB3	A0A0A6YYF3	556 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	CYP7A1	P22680	504 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	PRKG1	Q13976	671 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	ZSCAN25	Q6NSZ9	544 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	SAPCD2	Q86UD0	394 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	CERS3	Q8IU89	383 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	MAGEB6	Q8N7X4	407 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	KLRG1	Q96E93	195 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	HAUS7	Q99871	368 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	NDUFB9	Q9Y6M9	179 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	TRPM7	Q96QT4	1865 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	GAK	O14976	1311 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	TTC41P	Q6P2S7	1318 aa		13.56	□□□□□ -0.24
TMC1-205	ENST00000492418	RASSF10	A6NK89	507 aa		13.55	□□□□□ -0.24
TMC1-205	ENST00000492418	TCP10	Q12799	353 aa		13.55	□□□□□ -0.24
TMC1-205	ENST00000492418	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.55	□□□□□ -0.24
TMC1-205	ENST00000492418	SLC9C2	Q5TAH2	1124 aa		13.55	□□□□□ -0.24
TMC1-205	ENST00000492418	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.55	□□□□□ -0.24
TMC1-205	ENST00000492418	HHIPL1	Q96JK4	782 aa		13.55	□□□□□ -0.24
TMC1-205	ENST00000492418	TMEM39B	Q9GZU3	492 aa		13.55	□□□□□ -0.24
TMC1-205	ENST00000492418	ANTXR1	Q9H6X2	564 aa		13.55	□□□□□ -0.24
TMC1-205	ENST00000492418	GLRX3	O76003	335 aa	Known RBP	13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	IGHD	P01880	384 aa		13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	MX1	P20591	662 aa		13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	IREB2	P48200	963 aa	Known RBP	13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	ZNF157	P51786	506 aa	Predicted RBP	13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	SMC5	Q8IY18	1101 aa		13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	TEX11	Q8IYF3	940 aa		13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	DNAJC5G	Q8N7S2	189 aa		13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	FAM151A	Q8WW52	585 aa		13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	CCDC102A	Q96A19	550 aa		13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	LNPK	Q9C0E8	428 aa		13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	ANGEL1	Q9UNK9	670 aa	Known RBP	13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	ECM29	Q5VYK3	1845 aa		13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	AOX1	Q06278	1338 aa		13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	CNTNAP1	P78357	1384 aa		13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	MYH2	Q9UKX2	1941 aa		13.54	□□□□□ -0.24
TMC1-205	ENST00000492418	UBE2Q2L	H0YL09	131 aa		13.53	□□□□□ -0.24
TMC1-205	ENST00000492418	ENTPD3	O75355	529 aa		13.53	□□□□□ -0.24
TMC1-205	ENST00000492418	RGS3	P49796	1198 aa		13.53	□□□□□ -0.24
TMC1-205	ENST00000492418	PICALM	Q13492	652 aa		13.53	□□□□□ -0.24
TMC1-205	ENST00000492418	DCAF15	Q66K64	600 aa		13.53	□□□□□ -0.24
TMC1-205	ENST00000492418	RGMB	Q6NW40	437 aa		13.53	□□□□□ -0.24
TMC1-205	ENST00000492418	CHD1L	Q86WJ1	897 aa		13.53	□□□□□ -0.24
TMC1-205	ENST00000492418	CAPNS2	Q96L46	248 aa		13.53	□□□□□ -0.24
TMC1-205	ENST00000492418	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.53	□□□□□ -0.24
TMC1-205	ENST00000492418	VEGFB	P49765	207 aa		13.52	□□□□□ -0.25
TMC1-205	ENST00000492418	PPP4C	P60510	307 aa		13.52	□□□□□ -0.25
TMC1-205	ENST00000492418	NUCB1	Q02818	461 aa		13.52	□□□□□ -0.25
TMC1-205	ENST00000492418	SLC10A4	Q96EP9	437 aa		13.52	□□□□□ -0.25
TMC1-205	ENST00000492418	IDI2	Q9BXS1	227 aa		13.52	□□□□□ -0.25
TMC1-205	ENST00000492418	WDR33	Q9C0J8	1336 aa	Known RBP	13.52	□□□□□ -0.25
TMC1-205	ENST00000492418	AKAP11	Q9UKA4	1901 aa		13.52	□□□□□ -0.25
TMC1-205	ENST00000492418	MAGEB6P1	A0A0J9YX57	407 aa		13.51	□□□□□ -0.25
TMC1-205	ENST00000492418	PDE6A	P16499	860 aa		13.51	□□□□□ -0.25
TMC1-205	ENST00000492418	USP5	P45974	858 aa		13.51	□□□□□ -0.25
TMC1-205	ENST00000492418	NFIA	Q12857	509 aa		13.51	□□□□□ -0.25
TMC1-205	ENST00000492418	TSHZ3	Q63HK5	1081 aa		13.51	□□□□□ -0.25
TMC1-205	ENST00000492418	CYP4F22	Q6NT55	531 aa		13.51	□□□□□ -0.25
TMC1-205	ENST00000492418	MIGA1	Q8NAN2	632 aa		13.51	□□□□□ -0.25
TMC1-205	ENST00000492418	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.51	□□□□□ -0.25
TMC1-205	ENST00000492418	ZNF384	Q8TF68	577 aa		13.51	□□□□□ -0.25
TMC1-205	ENST00000492418	EDC3	Q96F86	508 aa	Known RBP	13.51	□□□□□ -0.25
TMC1-205	ENST00000492418	BEGAIN	Q9BUH8	593 aa		13.51	□□□□□ -0.25
TMC1-205	ENST00000492418	ZNF532	Q9HCE3	1301 aa		13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	UNCX	A6NJT0	531 aa		13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	NPM3	O75607	178 aa	Known RBP	13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	WDHD1	O75717	1129 aa	Predicted RBP	13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	NOG	Q13253	232 aa		13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	MOB2	Q70IA6	237 aa		13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	ANKRD13A	Q8IZ07	590 aa		13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	TGFBRAP1	Q8WUH2	860 aa		13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	TEPSIN	Q96N21	525 aa		13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	CSRNP1	Q96S65	589 aa		13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	TRIM34	Q9BYJ4	488 aa		13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	ZNF341	Q9BYN7	854 aa		13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	FAM198A	Q9UFP1	575 aa		13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	CSAD	Q9Y600	493 aa		13.5	□□□□□ -0.25
TMC1-205	ENST00000492418	USP2	O75604	605 aa	Predicted RBP	13.49	□□□□□ -0.25
TMC1-205	ENST00000492418	ZFY	P08048	801 aa	Predicted RBP	13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms