RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 TCP10Q12799 353 aa22.79■■□□□ 1.24
SMIM4-205ENST00000491607 TFCP2Q12800 502 aa22.79■■□□□ 1.24
SMIM4-205ENST00000491607 CCL15Q16663 113 aa22.79■■□□□ 1.24
SMIM4-205ENST00000491607 DCAF15Q66K64 600 aa22.79■■□□□ 1.24
SMIM4-205ENST00000491607 CDC42EP5Q6NZY7 148 aa22.79■■□□□ 1.24
SMIM4-205ENST00000491607 ZKSCAN4Q969J2 545 aaPredicted RBP22.79■■□□□ 1.24
SMIM4-205ENST00000491607 MS4A4AQ96JQ5 239 aa22.79■■□□□ 1.24
SMIM4-205ENST00000491607 TRIM17Q9Y577 477 aa22.79■■□□□ 1.24
SMIM4-205ENST00000491607 SALL1Q9NSC2 1324 aa22.79■■□□□ 1.24
SMIM4-205ENST00000491607 RPAP1Q9BWH6 1393 aaPredicted RBP22.78■■□□□ 1.24
SMIM4-205ENST00000491607 GNAI2P04899 355 aa22.78■■□□□ 1.24
SMIM4-205ENST00000491607 HNRNPUQ00839 825 aaKnown RBP eCLIP22.78■■□□□ 1.24
SMIM4-205ENST00000491607 MTX1Q13505 466 aa22.78■■□□□ 1.24
SMIM4-205ENST00000491607 MIGA2Q7L4E1 593 aa22.78■■□□□ 1.24
SMIM4-205ENST00000491607 ZGPATQ8N5A5 531 aaKnown RBP22.78■■□□□ 1.24
SMIM4-205ENST00000491607 FAM151AQ8WW52 585 aa22.78■■□□□ 1.24
SMIM4-205ENST00000491607 BRI3BPQ8WY22 251 aa22.78■■□□□ 1.24
SMIM4-205ENST00000491607 AKAP2Q9Y2D5 859 aa22.78■■□□□ 1.24
SMIM4-205ENST00000491607 SNCAIPQ9Y6H5 919 aa22.78■■□□□ 1.24
SMIM4-205ENST00000491607 A0A1B0GUL7 405 aa22.77■■□□□ 1.24
SMIM4-205ENST00000491607 SPDYE5A6NIY4 337 aa22.77■■□□□ 1.24
SMIM4-205ENST00000491607 ERO1AQ96HE7 468 aa22.77■■□□□ 1.24
SMIM4-205ENST00000491607 ZNF341Q9BYN7 854 aa22.77■■□□□ 1.24
SMIM4-205ENST00000491607 USP40Q9NVE5 1235 aa22.77■■□□□ 1.24
SMIM4-205ENST00000491607 NFIAQ12857 509 aa22.76■■□□□ 1.23
SMIM4-205ENST00000491607 RASGRF1Q13972 1273 aa22.76■■□□□ 1.23
SMIM4-205ENST00000491607 OTOP1Q7RTM1 612 aa22.76■■□□□ 1.23
SMIM4-205ENST00000491607 ERO1BQ86YB8 467 aa22.76■■□□□ 1.23
SMIM4-205ENST00000491607 CD99L2Q8TCZ2 262 aa22.76■■□□□ 1.23
SMIM4-205ENST00000491607 XAGE2Q96GT9 111 aa22.76■■□□□ 1.23
SMIM4-205ENST00000491607 NEUROD6Q96NK8 337 aa22.76■■□□□ 1.23
SMIM4-205ENST00000491607 ABCF2Q9UG63 623 aa22.76■■□□□ 1.23
SMIM4-205ENST00000491607 MVPQ14764 893 aaKnown RBP22.75■■□□□ 1.23
SMIM4-205ENST00000491607 TAF1CQ15572 869 aaPredicted RBP22.75■■□□□ 1.23
SMIM4-205ENST00000491607 ZKSCAN2Q63HK3 967 aa22.75■■□□□ 1.23
SMIM4-205ENST00000491607 DZIP1Q86YF9 867 aaKnown RBP22.75■■□□□ 1.23
SMIM4-205ENST00000491607 MIER1Q8N108 512 aa22.75■■□□□ 1.23
SMIM4-205ENST00000491607 SP3Q02447 781 aa22.74■■□□□ 1.23
SMIM4-205ENST00000491607 FAM43AQ8N2R8 423 aa22.74■■□□□ 1.23
SMIM4-205ENST00000491607 ZFYVE28Q9HCC9 887 aa22.74■■□□□ 1.23
SMIM4-205ENST00000491607 CETPP11597 493 aa22.73■■□□□ 1.23
SMIM4-205ENST00000491607 INPP5BP32019 993 aa22.73■■□□□ 1.23
SMIM4-205ENST00000491607 GORABQ5T7V8 394 aa22.73■■□□□ 1.23
SMIM4-205ENST00000491607 TMEM57Q8N5G2 664 aa22.73■■□□□ 1.23
SMIM4-205ENST00000491607 FAM198AQ9UFP1 575 aa22.73■■□□□ 1.23
SMIM4-205ENST00000491607 PNMA6EA0A0J9YXQ4 647 aa22.72■■□□□ 1.23
SMIM4-205ENST00000491607 IRF6O14896 467 aa22.72■■□□□ 1.23
SMIM4-205ENST00000491607 WDHD1O75717 1129 aaPredicted RBP22.72■■□□□ 1.23
SMIM4-205ENST00000491607 G3BP1Q13283 466 aaKnown RBP eCLIP22.72■■□□□ 1.23
SMIM4-205ENST00000491607 PPIL2Q13356 520 aa22.72■■□□□ 1.23
SMIM4-205ENST00000491607 SNAPC2Q13487 334 aa22.72■■□□□ 1.23
SMIM4-205ENST00000491607 EFCC1Q9HA90 598 aa22.72■■□□□ 1.23
SMIM4-205ENST00000491607 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.72■■□□□ 1.23
SMIM4-205ENST00000491607 PDS5AQ29RF7 1337 aaKnown RBP22.72■■□□□ 1.23
SMIM4-205ENST00000491607 ZBTB22O15209 634 aa22.71■■□□□ 1.23
SMIM4-205ENST00000491607 DIEXFQ68CQ4 756 aaKnown RBP22.71■■□□□ 1.23
SMIM4-205ENST00000491607 SPTY2D1Q68D10 685 aaPredicted RBP22.71■■□□□ 1.23
SMIM4-205ENST00000491607 SLF2Q8IX21 1173 aa22.71■■□□□ 1.23
SMIM4-205ENST00000491607 RGS3P49796 1198 aa22.7■■□□□ 1.22
SMIM4-205ENST00000491607 PPATQ06203 517 aa22.7■■□□□ 1.22
SMIM4-205ENST00000491607 ZFPM1Q8IX07 1006 aa22.7■■□□□ 1.22
SMIM4-205ENST00000491607 PTPN22Q9Y2R2 807 aa22.7■■□□□ 1.22
SMIM4-205ENST00000491607 GAKO14976 1311 aa22.7■■□□□ 1.22
SMIM4-205ENST00000491607 ERICH6Q7L0X2 663 aa22.69■■□□□ 1.22
SMIM4-205ENST00000491607 ZSCAN29Q8IWY8 852 aaPredicted RBP22.69■■□□□ 1.22
SMIM4-205ENST00000491607 FTSJ3Q8IY81 847 aaKnown RBP22.69■■□□□ 1.22
SMIM4-205ENST00000491607 ZNF112Q9UJU3 913 aa22.69■■□□□ 1.22
SMIM4-205ENST00000491607 BTBD19C9JJ37 291 aa22.68■■□□□ 1.22
SMIM4-205ENST00000491607 BTDP43251 543 aa22.68■■□□□ 1.22
SMIM4-205ENST00000491607 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.68■■□□□ 1.22
SMIM4-205ENST00000491607 SPATA5Q8NB90 893 aa22.68■■□□□ 1.22
SMIM4-205ENST00000491607 IDI2Q9BXS1 227 aa22.68■■□□□ 1.22
SMIM4-205ENST00000491607 HMG20BQ9P0W2 317 aa22.68■■□□□ 1.22
SMIM4-205ENST00000491607 MROH7-TTC4A0A0A0MT08 1334 aa22.67■■□□□ 1.22
SMIM4-205ENST00000491607 ENTPD3O75355 529 aa22.67■■□□□ 1.22
SMIM4-205ENST00000491607 MECOMQ03112 1051 aa22.67■■□□□ 1.22
SMIM4-205ENST00000491607 PICALMQ13492 652 aa22.67■■□□□ 1.22
SMIM4-205ENST00000491607 PI16Q6UXB8 463 aa22.67■■□□□ 1.22
SMIM4-205ENST00000491607 CAP1Q01518 475 aa22.66■■□□□ 1.22
SMIM4-205ENST00000491607 OS9Q13438 667 aaPredicted RBP22.66■■□□□ 1.22
SMIM4-205ENST00000491607 ARHGEF6Q15052 776 aa22.66■■□□□ 1.22
SMIM4-205ENST00000491607 C1orf115Q9H7X2 142 aa22.66■■□□□ 1.22
SMIM4-205ENST00000491607 ZCCHC17Q9NP64 241 aaKnown RBP22.66■■□□□ 1.22
SMIM4-205ENST00000491607 AK9Q5TCS8 1911 aa22.65■■□□□ 1.22
SMIM4-205ENST00000491607 MYH2Q9UKX2 1941 aa22.65■■□□□ 1.22
SMIM4-205ENST00000491607 TLR2O60603 784 aa22.65■■□□□ 1.22
SMIM4-205ENST00000491607 TBC1D9Q6ZT07 1266 aa22.65■■□□□ 1.22
SMIM4-205ENST00000491607 ITPRIPQ8IWB1 547 aa22.65■■□□□ 1.22
SMIM4-205ENST00000491607 FAM163AQ96GL9 167 aaPredicted RBP22.65■■□□□ 1.22
SMIM4-205ENST00000491607 RFX7Q2KHR2 1363 aa22.64■■□□□ 1.22
SMIM4-205ENST00000491607 TNRC18O15417 2968 aaPredicted RBP22.64■■□□□ 1.22
SMIM4-205ENST00000491607 ARID4AP29374 1257 aaPredicted RBP22.64■■□□□ 1.21
SMIM4-205ENST00000491607 NOL9Q5SY16 702 aaKnown RBP22.64■■□□□ 1.21
SMIM4-205ENST00000491607 RAI14Q9P0K7 980 aa22.64■■□□□ 1.21
SMIM4-205ENST00000491607 UQCRFS1P1P0C7P4 283 aa22.63■■□□□ 1.21
SMIM4-205ENST00000491607 GSTO1P78417 241 aa22.63■■□□□ 1.21
SMIM4-205ENST00000491607 POLA2Q14181 598 aa22.63■■□□□ 1.21
SMIM4-205ENST00000491607 SH3BP5LQ7L8J4 393 aa22.63■■□□□ 1.21
SMIM4-205ENST00000491607 DDX4Q9NQI0 724 aaKnown RBP22.63■■□□□ 1.21
SMIM4-205ENST00000491607 ATRNL1Q5VV63 1379 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms