RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 CHGBP05060 677 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 BTDP43251 543 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 PDE1AP54750 535 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 RHBDL3P58872 404 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 NFIAQ12857 509 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 NAA16Q6N069 864 aaPredicted RBP17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 CDAN1Q8IWY9 1227 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 RFX7Q2KHR2 1363 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 TCP10L2B9ZVM9 353 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 CELF2O95319 508 aaKnown RBP17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 GSTO1P78417 241 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 RASA3Q14644 834 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 TTF1Q15361 905 aaPredicted RBP17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 SLF2Q8IX21 1173 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 MAGEB6Q8N7X4 407 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 USP40Q9NVE5 1235 aa17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 ZBTB47Q9UFB7 747 aaPredicted RBP17.49■□□□□ 0.39
SRGAP3-208ENST00000490348 TRPM7Q96QT4 1865 aa17.48■□□□□ 0.39
SRGAP3-208ENST00000490348 SSC5DA1L4H1 1573 aa17.48■□□□□ 0.39
SRGAP3-208ENST00000490348 PDE4AP27815 886 aa17.48■□□□□ 0.39
SRGAP3-208ENST00000490348 MAP3K12Q12852 859 aa17.48■□□□□ 0.39
SRGAP3-208ENST00000490348 SLFNL1Q499Z3 407 aa17.48■□□□□ 0.39
SRGAP3-208ENST00000490348 ZNF408Q9H9D4 720 aa17.48■□□□□ 0.39
SRGAP3-208ENST00000490348 TCRBV5S4A2TA0A5A2 114 aa17.47■□□□□ 0.39
SRGAP3-208ENST00000490348 TMEM88BA6NKF7 163 aa17.47■□□□□ 0.39
SRGAP3-208ENST00000490348 IGSF3O75054 1194 aa17.47■□□□□ 0.39
SRGAP3-208ENST00000490348 WDHD1O75717 1129 aaPredicted RBP17.47■□□□□ 0.39
SRGAP3-208ENST00000490348 GLRX3O76003 335 aaKnown RBP17.47■□□□□ 0.39
SRGAP3-208ENST00000490348 MAP4K4O95819 1239 aaPredicted RBP17.47■□□□□ 0.39
SRGAP3-208ENST00000490348 PDE6AP16499 860 aa17.47■□□□□ 0.39
SRGAP3-208ENST00000490348 PLEKHM2Q8IWE5 1019 aa17.47■□□□□ 0.39
SRGAP3-208ENST00000490348 TEPSINQ96N21 525 aa17.47■□□□□ 0.39
SRGAP3-208ENST00000490348 TMEM39BQ9GZU3 492 aa17.47■□□□□ 0.39
SRGAP3-208ENST00000490348 CREBZFQ9NS37 354 aa17.47■□□□□ 0.39
SRGAP3-208ENST00000490348 FAM198AQ9UFP1 575 aa17.47■□□□□ 0.39
SRGAP3-208ENST00000490348 ERC2O15083 957 aa17.46■□□□□ 0.39
SRGAP3-208ENST00000490348 NEFLP07196 543 aa17.46■□□□□ 0.39
SRGAP3-208ENST00000490348 LDHCP07864 332 aa17.46■□□□□ 0.39
SRGAP3-208ENST00000490348 CYP7A1P22680 504 aa17.46■□□□□ 0.39
SRGAP3-208ENST00000490348 SLC9C2Q5TAH2 1124 aa17.46■□□□□ 0.39
SRGAP3-208ENST00000490348 FKBP1CQ5VVH2 108 aa17.46■□□□□ 0.39
SRGAP3-208ENST00000490348 AATFQ9NY61 560 aaKnown RBP eCLIP17.46■□□□□ 0.39
SRGAP3-208ENST00000490348 ZFPM1Q8IX07 1006 aa17.45■□□□□ 0.38
SRGAP3-208ENST00000490348 SH3RF3Q8TEJ3 882 aaPredicted RBP17.45■□□□□ 0.38
SRGAP3-208ENST00000490348 IDI2Q9BXS1 227 aa17.45■□□□□ 0.38
SRGAP3-208ENST00000490348 DDX4Q9NQI0 724 aaKnown RBP17.45■□□□□ 0.38
SRGAP3-208ENST00000490348 PPP2R3BQ9Y5P8 575 aa17.45■□□□□ 0.38
SRGAP3-208ENST00000490348 ZNF532Q9HCE3 1301 aa17.45■□□□□ 0.38
SRGAP3-208ENST00000490348 PPP4CP60510 307 aa17.45■□□□□ 0.38
SRGAP3-208ENST00000490348 DYNLL1P63167 89 aaKnown RBP17.45■□□□□ 0.38
SRGAP3-208ENST00000490348 TNFAIP1Q13829 316 aa17.45■□□□□ 0.38
SRGAP3-208ENST00000490348 NBPF12Q5TAG4 269 aaPredicted RBP17.45■□□□□ 0.38
SRGAP3-208ENST00000490348 FAM83AQ86UY5 434 aa17.45■□□□□ 0.38
SRGAP3-208ENST00000490348 MIGA1Q8NAN2 632 aa17.45■□□□□ 0.38
SRGAP3-208ENST00000490348 ADD2P35612 726 aa17.44■□□□□ 0.38
SRGAP3-208ENST00000490348 TCP10Q12799 353 aa17.44■□□□□ 0.38
SRGAP3-208ENST00000490348 KBTBD3Q8NAB2 608 aa17.44■□□□□ 0.38
SRGAP3-208ENST00000490348 OSBPL3Q9H4L5 887 aa17.44■□□□□ 0.38
SRGAP3-208ENST00000490348 TMOD2Q9NZR1 351 aa17.44■□□□□ 0.38
SRGAP3-208ENST00000490348 FZD1Q9UP38 647 aa17.44■□□□□ 0.38
SRGAP3-208ENST00000490348 RGS3P49796 1198 aa17.43■□□□□ 0.38
SRGAP3-208ENST00000490348 TMED8Q6PL24 325 aaPredicted RBP17.43■□□□□ 0.38
SRGAP3-208ENST00000490348 MOB2Q70IA6 237 aa17.43■□□□□ 0.38
SRGAP3-208ENST00000490348 SAPCD2Q86UD0 394 aa17.43■□□□□ 0.38
SRGAP3-208ENST00000490348 RIOK1Q9BRS2 568 aaKnown RBP17.43■□□□□ 0.38
SRGAP3-208ENST00000490348 CENPQQ7L2Z9 268 aaPredicted RBP17.42■□□□□ 0.38
SRGAP3-208ENST00000490348 SH3BP5LQ7L8J4 393 aa17.42■□□□□ 0.38
SRGAP3-208ENST00000490348 FAM151AQ8WW52 585 aa17.42■□□□□ 0.38
SRGAP3-208ENST00000490348 GBA2Q9HCG7 927 aaPredicted RBP17.42■□□□□ 0.38
SRGAP3-208ENST00000490348 TLL2Q9Y6L7 1015 aa17.42■□□□□ 0.38
SRGAP3-208ENST00000490348 BAG3O95817 575 aa17.41■□□□□ 0.38
SRGAP3-208ENST00000490348 TNNI2P48788 182 aa17.41■□□□□ 0.38
SRGAP3-208ENST00000490348 PICALMQ13492 652 aa17.41■□□□□ 0.38
SRGAP3-208ENST00000490348 SKAP1Q86WV1 359 aa17.41■□□□□ 0.38
SRGAP3-208ENST00000490348 TEX11Q8IYF3 940 aa17.41■□□□□ 0.38
SRGAP3-208ENST00000490348 DNAJC5GQ8N7S2 189 aa17.41■□□□□ 0.38
SRGAP3-208ENST00000490348 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.41■□□□□ 0.38
SRGAP3-208ENST00000490348 MYH7P12883 1935 aa17.41■□□□□ 0.38
SRGAP3-208ENST00000490348 RPAP1Q9BWH6 1393 aaPredicted RBP17.41■□□□□ 0.38
SRGAP3-208ENST00000490348 UBE3CQ15386 1083 aa17.4■□□□□ 0.38
SRGAP3-208ENST00000490348 CCDC136Q96JN2 1154 aa17.4■□□□□ 0.38
SRGAP3-208ENST00000490348 ABT1Q9ULW3 272 aaKnown RBP17.4■□□□□ 0.38
SRGAP3-208ENST00000490348 PAPPA2Q9BXP8 1791 aa17.4■□□□□ 0.38
SRGAP3-208ENST00000490348 CDK5RAP2Q96SN8 1893 aa17.4■□□□□ 0.38
SRGAP3-208ENST00000490348 ENTPD3O75355 529 aa17.4■□□□□ 0.38
SRGAP3-208ENST00000490348 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
SRGAP3-208ENST00000490348 PRKG1Q13976 671 aa17.4■□□□□ 0.38
SRGAP3-208ENST00000490348 NOL10Q9BSC4 688 aaKnown RBP17.4■□□□□ 0.38
SRGAP3-208ENST00000490348 ATRNL1Q5VV63 1379 aa17.39■□□□□ 0.37
SRGAP3-208ENST00000490348 MAGEB6P1A0A0J9YX57 407 aa17.39■□□□□ 0.37
SRGAP3-208ENST00000490348 DDTLA6NHG4 134 aaPredicted RBP17.39■□□□□ 0.37
SRGAP3-208ENST00000490348 RASSF10A6NK89 507 aa17.39■□□□□ 0.37
SRGAP3-208ENST00000490348 PLCG2P16885 1265 aa17.39■□□□□ 0.37
SRGAP3-208ENST00000490348 SUPT20HL1Q3ZLR7 823 aa17.39■□□□□ 0.37
SRGAP3-208ENST00000490348 LCORLQ8N3X6 602 aa17.39■□□□□ 0.37
SRGAP3-208ENST00000490348 C2orf69Q8N8R5 385 aa17.39■□□□□ 0.37
SRGAP3-208ENST00000490348 TGFBRAP1Q8WUH2 860 aa17.39■□□□□ 0.37
SRGAP3-208ENST00000490348 PUS7LQ9H0K6 701 aaKnown RBP17.39■□□□□ 0.37
SRGAP3-208ENST00000490348 FLT1P17948 1338 aa17.39■□□□□ 0.37
SRGAP3-208ENST00000490348 RNF113AO15541 343 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms