RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 HAND2P61296 217 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 FYB2Q5VWT5 728 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 PPFIBP2Q8ND30 876 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 KDM5DQ9BY66 1539 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 CUTAO60888 179 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 DNA2P51530 1060 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 IRX4P78413 519 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 LIN9Q5TKA1 542 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 CCDC186Q7Z3E2 898 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 MEIS3Q99687 375 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 IGHDP01880 384 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 PARP1P09874 1014 aaKnown RBP9.92□□□□□ -0.82
LSAMP-205ENST00000490035 IL2RBP14784 551 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 INF2Q27J81 1249 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 CEP85Q6P2H3 762 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 SPATS2Q86XZ4 545 aaKnown RBP9.92□□□□□ -0.82
LSAMP-205ENST00000490035 ATP10BO94823 1461 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 MTMR3Q13615 1198 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 NOX5Q96PH1 765 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 ARHGAP25P42331 645 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 COPS6Q7L5N1 327 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 CACNA2D3Q8IZS8 1091 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 CCDC51Q96ER9 411 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 MRVI1Q9Y6F6 885 aa9.92□□□□□ -0.82
LSAMP-205ENST00000490035 CFAP157Q5JU67 520 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 TMTC1Q8IUR5 882 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 ARHGEF10LQ9HCE6 1279 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 ZBTB40Q9NUA8 1239 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.91□□□□□ -0.82
LSAMP-205ENST00000490035 FAM169AQ9Y6X4 670 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 DNM1Q05193 864 aaKnown RBP9.91□□□□□ -0.82
LSAMP-205ENST00000490035 TEKT1Q969V4 418 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 PCP11498 1178 aaKnown RBP9.91□□□□□ -0.82
LSAMP-205ENST00000490035 GBP1P32455 592 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 ATP6V1AP38606 617 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 GTF2A1P52655 376 aaPredicted RBP9.91□□□□□ -0.82
LSAMP-205ENST00000490035 BRDTQ58F21 947 aaPredicted RBP9.91□□□□□ -0.82
LSAMP-205ENST00000490035 GDPD2Q9HCC8 539 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 NT5C2P49902 561 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 RTCBQ9Y3I0 505 aaKnown RBP9.91□□□□□ -0.82
LSAMP-205ENST00000490035 KIF3CO14782 793 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 TOM1O60784 492 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 CIB2O75838 187 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 ERCC5P28715 1186 aaPredicted RBP9.91□□□□□ -0.82
LSAMP-205ENST00000490035 TTC31Q49AM3 519 aaPredicted RBP9.91□□□□□ -0.82
LSAMP-205ENST00000490035 WDR66Q8TBY9 1149 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 BCRP11274 1271 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 SMC1BQ8NDV3 1235 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 STMN2Q93045 179 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 USHBP1Q8N6Y0 703 aa9.91□□□□□ -0.82
LSAMP-205ENST00000490035 RPS6KB1P23443 525 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 PPFIA1Q13136 1202 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 VCXQ9H320 206 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 ATP5J2-PTCD1G3V325 749 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 LMBR1LQ6UX01 489 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 NAPGQ99747 312 aaPredicted RBP9.9□□□□□ -0.82
LSAMP-205ENST00000490035 DDX21Q9NR30 783 aaKnown RBP eCLIP9.9□□□□□ -0.82
LSAMP-205ENST00000490035 ANGEL1Q9UNK9 670 aaKnown RBP9.9□□□□□ -0.82
LSAMP-205ENST00000490035 AK2P54819 239 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 SLC9C1Q4G0N8 1177 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 SBNO1A3KN83 1393 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 SEPT6Q14141 434 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 PUM3Q15397 648 aaKnown RBP9.9□□□□□ -0.82
LSAMP-205ENST00000490035 CCDC63Q8NA47 563 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 DHX58Q96C10 678 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 TCHPQ9BT92 498 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 ADGRL2O95490 1459 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 A0A1B0GUA9 196 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 NMIQ13287 307 aaPredicted RBP9.9□□□□□ -0.82
LSAMP-205ENST00000490035 DNAJC25Q9H1X3 360 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 VCX3BQ9H321 246 aa9.9□□□□□ -0.82
LSAMP-205ENST00000490035 TRIM37O94972 964 aa9.9□□□□□ -0.83
LSAMP-205ENST00000490035 CHMLP26374 656 aa9.9□□□□□ -0.83
LSAMP-205ENST00000490035 YWHAEP62258 255 aaKnown RBP9.9□□□□□ -0.83
LSAMP-205ENST00000490035 KDM3AQ9Y4C1 1321 aa9.9□□□□□ -0.83
LSAMP-205ENST00000490035 PTPDC1A2A3K4 754 aa9.9□□□□□ -0.83
LSAMP-205ENST00000490035 ABCD1P33897 745 aa9.9□□□□□ -0.83
LSAMP-205ENST00000490035 INTS8Q75QN2 995 aaKnown RBP9.9□□□□□ -0.83
LSAMP-205ENST00000490035 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.9□□□□□ -0.83
LSAMP-205ENST00000490035 ASXL2Q76L83 1435 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 EEF2P13639 858 aaKnown RBP9.89□□□□□ -0.83
LSAMP-205ENST00000490035 CLASP1Q7Z460 1538 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 KIF11P52732 1056 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 ZKSCAN3Q9BRR0 538 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 NIP7Q9Y221 180 aaKnown RBP eCLIP9.89□□□□□ -0.83
LSAMP-205ENST00000490035 RAB11FIP4Q86YS3 637 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 FNBP1Q96RU3 617 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 PAIP2Q9BPZ3 127 aaKnown RBP9.89□□□□□ -0.83
LSAMP-205ENST00000490035 TM6SF1Q9BZW5 370 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 MCM9Q9NXL9 1143 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 GOLGA6CA6NDK9 693 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 GOLGA6BA6NDN3 693 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 VAMP4O75379 141 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 GOLGA6DP0CG33 693 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 PLEKHM2Q8IWE5 1019 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 TBC1D31Q96DN5 1066 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 RBM17Q96I25 401 aaKnown RBP9.89□□□□□ -0.83
LSAMP-205ENST00000490035 GOLGA6AQ9NYA3 693 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 LMOD1P29536 600 aaPredicted RBP9.89□□□□□ -0.83
LSAMP-205ENST00000490035 TRPC3Q13507 836 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms