RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 ZNF784Q8NCA9 323 aaPredicted RBP16.03■□□□□ 0.16
TRAIP-210ENST00000489948 STRBPQ96SI9 672 aaKnown RBP16.03■□□□□ 0.16
TRAIP-210ENST00000489948 NOL10Q9BSC4 688 aaKnown RBP16.03■□□□□ 0.16
TRAIP-210ENST00000489948 DSCC1Q9BVC3 393 aa16.03■□□□□ 0.16
TRAIP-210ENST00000489948 LSG1Q9H089 658 aaKnown RBP16.03■□□□□ 0.16
TRAIP-210ENST00000489948 ZBTB12Q9Y330 459 aaPredicted RBP16.03■□□□□ 0.16
TRAIP-210ENST00000489948 F8W031 263 aaPredicted RBP16.02■□□□□ 0.16
TRAIP-210ENST00000489948 BTDP43251 543 aa16.02■□□□□ 0.16
TRAIP-210ENST00000489948 GMPSP49915 693 aaPredicted RBP16.02■□□□□ 0.16
TRAIP-210ENST00000489948 CCDC129Q6ZRS4 1044 aa16.02■□□□□ 0.16
TRAIP-210ENST00000489948 LCORLQ8N3X6 602 aa16.02■□□□□ 0.16
TRAIP-210ENST00000489948 MIGA1Q8NAN2 632 aa16.02■□□□□ 0.16
TRAIP-210ENST00000489948 ANO2Q9NQ90 1003 aa16.02■□□□□ 0.16
TRAIP-210ENST00000489948 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
TRAIP-210ENST00000489948 FOXP2O15409 715 aa16.01■□□□□ 0.15
TRAIP-210ENST00000489948 SEC24BO95487 1268 aa16.01■□□□□ 0.15
TRAIP-210ENST00000489948 RHBDL3P58872 404 aa16.01■□□□□ 0.15
TRAIP-210ENST00000489948 APOBEC3HQ6NTF7 200 aaKnown RBP16.01■□□□□ 0.15
TRAIP-210ENST00000489948 GIMAP6Q6P9H5 292 aa16.01■□□□□ 0.15
TRAIP-210ENST00000489948 KIAA1211Q6ZU35 1233 aa16.01■□□□□ 0.15
TRAIP-210ENST00000489948 ZBED3Q96IU2 234 aaPredicted RBP16.01■□□□□ 0.15
TRAIP-210ENST00000489948 L3MBTL3Q96JM7 780 aaPredicted RBP16.01■□□□□ 0.15
TRAIP-210ENST00000489948 AATFQ9NY61 560 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRAIP-210ENST00000489948 COL2A1P02458 1487 aaPredicted RBP16■□□□□ 0.15
TRAIP-210ENST00000489948 SPDYE2BA6NHP3 402 aa16■□□□□ 0.15
TRAIP-210ENST00000489948 SPDYE6P0CI01 402 aa16■□□□□ 0.15
TRAIP-210ENST00000489948 HSPD1P10809 573 aaKnown RBP16■□□□□ 0.15
TRAIP-210ENST00000489948 SCNN1DP51172 638 aa16■□□□□ 0.15
TRAIP-210ENST00000489948 ALX1Q15699 326 aa16■□□□□ 0.15
TRAIP-210ENST00000489948 CFAP100Q494V2 611 aa16■□□□□ 0.15
TRAIP-210ENST00000489948 MAP4K1Q92918 833 aa16■□□□□ 0.15
TRAIP-210ENST00000489948 USP26Q9BXU7 913 aa16■□□□□ 0.15
TRAIP-210ENST00000489948 CRNKL1Q9BZJ0 848 aaKnown RBP16■□□□□ 0.15
TRAIP-210ENST00000489948 ARMT1Q9H993 441 aa16■□□□□ 0.15
TRAIP-210ENST00000489948 UPF2Q9HAU5 1272 aaKnown RBP16■□□□□ 0.15
TRAIP-210ENST00000489948 GPRC5DQ9NZD1 345 aa16■□□□□ 0.15
TRAIP-210ENST00000489948 GJA3Q9Y6H8 435 aa16■□□□□ 0.15
TRAIP-210ENST00000489948 BAZ2AQ9UIF9 1905 aaKnown RBP16■□□□□ 0.15
TRAIP-210ENST00000489948 DYNLL1P63167 89 aaKnown RBP15.99■□□□□ 0.15
TRAIP-210ENST00000489948 VPS53Q5VIR6 699 aa15.99■□□□□ 0.15
TRAIP-210ENST00000489948 MICALL2Q8IY33 904 aa15.99■□□□□ 0.15
TRAIP-210ENST00000489948 MYOZ2Q9NPC6 264 aa15.99■□□□□ 0.15
TRAIP-210ENST00000489948 ATP8A2Q9NTI2 1148 aa15.99■□□□□ 0.15
TRAIP-210ENST00000489948 U3KPZ7 1027 aaPredicted RBP15.99■□□□□ 0.15
TRAIP-210ENST00000489948 MYH1P12882 1939 aa15.98■□□□□ 0.15
TRAIP-210ENST00000489948 PATL2C9JE40 543 aaKnown RBP15.98■□□□□ 0.15
TRAIP-210ENST00000489948 NPM3O75607 178 aaKnown RBP15.98■□□□□ 0.15
TRAIP-210ENST00000489948 PTH1RQ03431 593 aa15.98■□□□□ 0.15
TRAIP-210ENST00000489948 DPY19L2Q6NUT2 758 aa15.98■□□□□ 0.15
TRAIP-210ENST00000489948 SH3RF3Q8TEJ3 882 aaPredicted RBP15.98■□□□□ 0.15
TRAIP-210ENST00000489948 EPB41L4AQ9HCS5 686 aaPredicted RBP15.98■□□□□ 0.15
TRAIP-210ENST00000489948 SLC4A4Q9Y6R1 1079 aa15.98■□□□□ 0.15
TRAIP-210ENST00000489948 GLTPD2A6NH11 291 aa15.97■□□□□ 0.15
TRAIP-210ENST00000489948 GSG1L2A8MUP6 293 aa15.97■□□□□ 0.15
TRAIP-210ENST00000489948 RBM25P49756 843 aaKnown RBP15.97■□□□□ 0.15
TRAIP-210ENST00000489948 DLGAP5Q15398 846 aa15.97■□□□□ 0.15
TRAIP-210ENST00000489948 CDC42EP5Q6NZY7 148 aa15.97■□□□□ 0.15
TRAIP-210ENST00000489948 IL17RAQ96F46 866 aa15.97■□□□□ 0.15
TRAIP-210ENST00000489948 IDI2Q9BXS1 227 aa15.97■□□□□ 0.15
TRAIP-210ENST00000489948 NACAP1Q9BZK3 213 aa15.97■□□□□ 0.15
TRAIP-210ENST00000489948 MKRN1Q9UHC7 482 aaKnown RBP15.97■□□□□ 0.15
TRAIP-210ENST00000489948 CNOT7Q9UIV1 285 aaKnown RBP15.97■□□□□ 0.15
TRAIP-210ENST00000489948 RBM8AQ9Y5S9 174 aaKnown RBP15.97■□□□□ 0.15
TRAIP-210ENST00000489948 CEP350Q5VT06 3117 aa15.97■□□□□ 0.15
TRAIP-210ENST00000489948 H7C1D1 291 aa15.96■□□□□ 0.15
TRAIP-210ENST00000489948 WDHD1O75717 1129 aaPredicted RBP15.96■□□□□ 0.15
TRAIP-210ENST00000489948 DDNO94850 711 aaPredicted RBP15.96■□□□□ 0.15
TRAIP-210ENST00000489948 HSPA4P34932 840 aa15.96■□□□□ 0.15
TRAIP-210ENST00000489948 SPDYE2Q495Y8 402 aa15.96■□□□□ 0.15
TRAIP-210ENST00000489948 FKBP1CQ5VVH2 108 aa15.96■□□□□ 0.15
TRAIP-210ENST00000489948 TEX11Q8IYF3 940 aa15.96■□□□□ 0.15
TRAIP-210ENST00000489948 KCNB2Q92953 911 aa15.96■□□□□ 0.15
TRAIP-210ENST00000489948 TBC1D32Q96NH3 1257 aa15.96■□□□□ 0.15
TRAIP-210ENST00000489948 CTNNA3Q9UI47 895 aa15.96■□□□□ 0.15
TRAIP-210ENST00000489948 FLT1P17948 1338 aa15.95■□□□□ 0.14
TRAIP-210ENST00000489948 MCCP23508 829 aa15.95■□□□□ 0.14
TRAIP-210ENST00000489948 LMOD1P29536 600 aaPredicted RBP15.95■□□□□ 0.14
TRAIP-210ENST00000489948 RBM5P52756 815 aaKnown RBP eCLIP15.95■□□□□ 0.14
TRAIP-210ENST00000489948 ANAPC15P60006 121 aa15.95■□□□□ 0.14
TRAIP-210ENST00000489948 NECTIN1Q15223 517 aa15.95■□□□□ 0.14
TRAIP-210ENST00000489948 KIF4BQ2VIQ3 1234 aa15.95■□□□□ 0.14
TRAIP-210ENST00000489948 IFNL3Q8IZI9 196 aa15.95■□□□□ 0.14
TRAIP-210ENST00000489948 SDR42E1Q8WUS8 393 aa15.95■□□□□ 0.14
TRAIP-210ENST00000489948 DDRGK1Q96HY6 314 aa15.95■□□□□ 0.14
TRAIP-210ENST00000489948 PRMT6Q96LA8 375 aaPredicted RBP15.95■□□□□ 0.14
TRAIP-210ENST00000489948 DCP1AQ9NPI6 582 aaPredicted RBP15.95■□□□□ 0.14
TRAIP-210ENST00000489948 ARPP21Q9UBL0 812 aaPredicted RBP15.95■□□□□ 0.14
TRAIP-210ENST00000489948 PCDHAC2Q9Y5I4 1007 aa15.95■□□□□ 0.14
TRAIP-210ENST00000489948 ROBO3Q96MS0 1386 aa15.95■□□□□ 0.14
TRAIP-210ENST00000489948 SIPA1L1O43166 1804 aa15.94■□□□□ 0.14
TRAIP-210ENST00000489948 SHTN1A0MZ66 631 aa15.94■□□□□ 0.14
TRAIP-210ENST00000489948 WNT10BO00744 389 aa15.94■□□□□ 0.14
TRAIP-210ENST00000489948 PRKAB2O43741 272 aa15.94■□□□□ 0.14
TRAIP-210ENST00000489948 MYO1BO43795 1136 aa15.94■□□□□ 0.14
TRAIP-210ENST00000489948 SLC34A2O95436 690 aa15.94■□□□□ 0.14
TRAIP-210ENST00000489948 FGAP02671 866 aa15.94■□□□□ 0.14
TRAIP-210ENST00000489948 SBK1Q52WX2 424 aa15.94■□□□□ 0.14
TRAIP-210ENST00000489948 RNF20Q5VTR2 975 aa15.94■□□□□ 0.14
TRAIP-210ENST00000489948 C22orf23Q9BZE7 217 aa15.94■□□□□ 0.14
TRAIP-210ENST00000489948 NAPBQ9H115 298 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms