RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 JAK2O60674 1132 aa11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 EXOSC10Q01780 885 aaKnown RBP11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 IMMTQ16891 758 aaKnown RBP11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 Q6ZNB5 142 aa11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 FERMT3Q86UX7 667 aa11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ZNF34Q8IZ26 560 aa11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 AGXT2Q9BYV1 514 aa11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ZSCAN16Q9H4T2 348 aaPredicted RBP11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 CDHR5Q9HBB8 845 aa11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 CCDC87Q9NVE4 849 aa11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 CCDC39Q9UFE4 941 aa11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SPATA31A1Q5TZJ5 1347 aa11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ZNF831Q5JPB2 1677 aa11.26□□□□□ -0.61
RAB3GAP1-205ENST00000489858 AKAP11Q9UKA4 1901 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 LTBP4Q8N2S1 1624 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 MSNP26038 577 aaKnown RBP11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ZAP70P43403 619 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 RESTQ13127 1097 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 LAPTM4AQ15012 233 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 DDB1Q16531 1140 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 NAA16Q6N069 864 aaPredicted RBP11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 TTC6Q86TZ1 520 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 RNF214Q8ND24 703 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 OSBP2Q969R2 916 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ZNF274Q96GC6 653 aaPredicted RBP11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 MTRQ99707 1265 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 IL21Q9HBE4 155 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 COL5A3P25940 1745 aaPredicted RBP11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 MROH5Q6ZUA9 1318 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 WDR19Q8NEZ3 1342 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 DOCK2Q92608 1830 aa11.25□□□□□ -0.61
RAB3GAP1-205ENST00000489858 PTPDC1A2A3K4 754 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 GOLGA6L4A6NEF3 574 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SLC5A1P13866 664 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 APOBRQ0VD83 1088 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SCRN1Q12765 414 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SCARF1Q14162 830 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 PUM3Q15397 648 aaKnown RBP11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SLFNL1Q499Z3 407 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 PARP10Q53GL7 1025 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 NUDT18Q6ZVK8 323 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 FBXL16Q8N461 479 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 VGLL2Q8N8G2 317 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 NSUN7Q8NE18 718 aaKnown RBP11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SPATA32Q96LK8 384 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 LRRC2Q9BYS8 371 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 NUP62CLQ9H1M0 184 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 DDX19AQ9NUU7 478 aaKnown RBP11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 TBC1D2BQ9UPU7 963 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 UBN2Q6ZU65 1347 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 RTL9Q8NET4 1388 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SLIT2O94813 1529 aa11.24□□□□□ -0.61
RAB3GAP1-205ENST00000489858 GPAA1O43292 621 aa11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 DTNBO60941 627 aa11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 PDE8BO95263 885 aa11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ARID4AP29374 1257 aaPredicted RBP11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 MCM5P33992 734 aa11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 EIF5P55010 431 aaKnown RBP11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 RALYLQ86SE5 291 aaKnown RBP11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SYNE4Q8N205 404 aa11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 TTC13Q8NBP0 860 aa11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 LEO1Q8WVC0 666 aaPredicted RBP11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 DDX11Q96FC9 970 aa11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 NAP1L2Q9ULW6 460 aaPredicted RBP11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 TIAM2Q8IVF5 1701 aa11.23□□□□□ -0.61
RAB3GAP1-205ENST00000489858 PRC1O43663 620 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 PTMAP06454 111 aaKnown RBP11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 C4AP0C0L4 1744 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 C4BP0C0L5 1744 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 CCDC192P0DO97 292 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ADD2P35612 726 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 MCAMP43121 646 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SCN7AQ01118 1682 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 UBE3CQ15386 1083 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 MAP3K11Q16584 847 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ATL3Q6DD88 541 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 NCOA7Q8NI08 942 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 LPIN2Q92539 896 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SMARCC1Q92922 1105 aaPredicted RBP11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 UTP14AQ9BVJ6 771 aaKnown RBP11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SALL1Q9NSC2 1324 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 CFAP45Q9UL16 551 aa11.22□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SPATA31A5Q5VU36 1347 aa11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 SPATA31A7Q8IWB4 1347 aa11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ZNF213O14771 459 aa11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 DHX16O60231 1041 aaKnown RBP11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ADAMTS2O95450 1211 aa11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 HCLS1P14317 486 aaPredicted RBP11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 PDIA3P30101 505 aaKnown RBP11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 ATP6V1AP38606 617 aa11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 CRKLP46109 303 aaKnown RBP11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 EVCP57679 992 aa11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 CCDC152Q4G0S7 254 aa11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 TTLL5Q6EMB2 1281 aa11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 FAM173BQ6P4H8 233 aa11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 INTS5Q6P9B9 1019 aaKnown RBP11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 PI16Q6UXB8 463 aa11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 MB21D2Q8IYB1 491 aaPredicted RBP11.21□□□□□ -0.61
RAB3GAP1-205ENST00000489858 BICD2Q8TD16 824 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms