RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 CHMP4AQ9BY43 222 aa12.84□□□□□ -0.35
AC055748.1-201ENST00000489836 CEP126Q9P2H0 1117 aa12.84□□□□□ -0.35
AC055748.1-201ENST00000489836 ANKRD31Q8N7Z5 1873 aa12.84□□□□□ -0.35
AC055748.1-201ENST00000489836 NTSR2O95665 410 aa12.83□□□□□ -0.36
AC055748.1-201ENST00000489836 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.83□□□□□ -0.36
AC055748.1-201ENST00000489836 PARP10Q53GL7 1025 aa12.83□□□□□ -0.36
AC055748.1-201ENST00000489836 HSP90AB3PQ58FF7 597 aa12.83□□□□□ -0.36
AC055748.1-201ENST00000489836 CCDC30Q5VVM6 783 aa12.83□□□□□ -0.36
AC055748.1-201ENST00000489836 NPAS3Q8IXF0 933 aa12.83□□□□□ -0.36
AC055748.1-201ENST00000489836 TTLL6Q8N841 843 aa12.83□□□□□ -0.36
AC055748.1-201ENST00000489836 PLBD2Q8NHP8 589 aa12.83□□□□□ -0.36
AC055748.1-201ENST00000489836 NYXQ9GZU5 481 aa12.83□□□□□ -0.36
AC055748.1-201ENST00000489836 FANCIQ9NVI1 1328 aa12.83□□□□□ -0.36
AC055748.1-201ENST00000489836 NUP98P52948 1817 aa12.83□□□□□ -0.36
AC055748.1-201ENST00000489836 RIC1Q4ADV7 1423 aa12.82□□□□□ -0.36
AC055748.1-201ENST00000489836 GPTP24298 496 aa12.82□□□□□ -0.36
AC055748.1-201ENST00000489836 ERVK-9P63128 1117 aa12.82□□□□□ -0.36
AC055748.1-201ENST00000489836 TWISTNBQ3B726 338 aaPredicted RBP12.82□□□□□ -0.36
AC055748.1-201ENST00000489836 DIEXFQ68CQ4 756 aaKnown RBP12.82□□□□□ -0.36
AC055748.1-201ENST00000489836 CC2D2BQ6DHV5 1058 aa12.82□□□□□ -0.36
AC055748.1-201ENST00000489836 STYK1Q6J9G0 422 aa12.82□□□□□ -0.36
AC055748.1-201ENST00000489836 PHAXQ9H814 394 aaKnown RBP12.82□□□□□ -0.36
AC055748.1-201ENST00000489836 CHD4Q14839 1912 aa12.82□□□□□ -0.36
AC055748.1-201ENST00000489836 DLEC1Q9Y238 1755 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 FAM177BA6PVY3 158 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 NPHP1O15259 732 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 VAMP4O75379 141 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 SLC10A5Q5PT55 438 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 FOXD4L5Q5VV16 416 aaPredicted RBP12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 PPP1R42Q7Z4L9 355 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 NLRP10Q86W26 655 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 ZNF592Q92610 1267 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 MASTLQ96GX5 879 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 CCDC85AQ96PX6 553 aaPredicted RBP12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 ISCA1Q9BUE6 129 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 COG6Q9Y2V7 657 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 ADCY9O60503 1353 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 ABCC12Q96J65 1359 aa12.81□□□□□ -0.36
AC055748.1-201ENST00000489836 ATP5J2-PTCD1G3V325 749 aa12.8□□□□□ -0.36
AC055748.1-201ENST00000489836 PPFIA3O75145 1194 aa12.8□□□□□ -0.36
AC055748.1-201ENST00000489836 GMPRP36959 345 aa12.8□□□□□ -0.36
AC055748.1-201ENST00000489836 PTSQ03393 145 aa12.8□□□□□ -0.36
AC055748.1-201ENST00000489836 TRIM28Q13263 835 aaKnown RBP12.8□□□□□ -0.36
AC055748.1-201ENST00000489836 CRY2Q49AN0 593 aa12.8□□□□□ -0.36
AC055748.1-201ENST00000489836 ARHGAP27Q6ZUM4 889 aa12.8□□□□□ -0.36
AC055748.1-201ENST00000489836 RNF217Q8TC41 542 aa12.8□□□□□ -0.36
AC055748.1-201ENST00000489836 POM121Q96HA1 1249 aa12.8□□□□□ -0.36
AC055748.1-201ENST00000489836 ARFGEF1Q9Y6D6 1849 aa12.8□□□□□ -0.36
AC055748.1-201ENST00000489836 RNF123Q5XPI4 1314 aa12.8□□□□□ -0.36
AC055748.1-201ENST00000489836 WIPF1O43516 503 aa12.79□□□□□ -0.36
AC055748.1-201ENST00000489836 NPR1P16066 1061 aa12.79□□□□□ -0.36
AC055748.1-201ENST00000489836 EXOSC9Q06265 439 aaKnown RBP12.79□□□□□ -0.36
AC055748.1-201ENST00000489836 TSGA10IPQ3SY00 556 aa12.79□□□□□ -0.36
AC055748.1-201ENST00000489836 IRF7Q92985 503 aa12.79□□□□□ -0.36
AC055748.1-201ENST00000489836 CNKSR1Q969H4 720 aa12.79□□□□□ -0.36
AC055748.1-201ENST00000489836 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.36
AC055748.1-201ENST00000489836 UTP14AQ9BVJ6 771 aaKnown RBP12.79□□□□□ -0.36
AC055748.1-201ENST00000489836 MYH16Q9H6N6 1097 aa12.79□□□□□ -0.36
AC055748.1-201ENST00000489836 COL11A2P13942 1736 aaPredicted RBP12.79□□□□□ -0.36
AC055748.1-201ENST00000489836 GTF2E1P29083 439 aaPredicted RBP12.78□□□□□ -0.36
AC055748.1-201ENST00000489836 C7orf43Q8WVR3 580 aa12.78□□□□□ -0.36
AC055748.1-201ENST00000489836 HOXA10P31260 410 aaPredicted RBP12.77□□□□□ -0.37
AC055748.1-201ENST00000489836 PRPF40BQ6NWY9 871 aaKnown RBP12.77□□□□□ -0.37
AC055748.1-201ENST00000489836 OSBPL3Q9H4L5 887 aa12.77□□□□□ -0.37
AC055748.1-201ENST00000489836 NFKBIEO00221 500 aa12.76□□□□□ -0.37
AC055748.1-201ENST00000489836 MEN1O00255 615 aa12.76□□□□□ -0.37
AC055748.1-201ENST00000489836 ALDH1B1P30837 517 aa12.76□□□□□ -0.37
AC055748.1-201ENST00000489836 G2E3Q7L622 706 aa12.76□□□□□ -0.37
AC055748.1-201ENST00000489836 SYNE4Q8N205 404 aa12.76□□□□□ -0.37
AC055748.1-201ENST00000489836 METTL22Q9BUU2 404 aaPredicted RBP12.76□□□□□ -0.37
AC055748.1-201ENST00000489836 STK31Q9BXU1 1019 aa12.76□□□□□ -0.37
AC055748.1-201ENST00000489836 TNRC6CQ9HCJ0 1690 aaKnown RBP12.76□□□□□ -0.37
AC055748.1-201ENST00000489836 ANKRD36CQ5JPF3 1778 aa12.76□□□□□ -0.37
AC055748.1-201ENST00000489836 E9PSI1 815 aa12.75□□□□□ -0.37
AC055748.1-201ENST00000489836 TCERG1O14776 1098 aaKnown RBP12.75□□□□□ -0.37
AC055748.1-201ENST00000489836 C21orf2O43822 256 aa12.75□□□□□ -0.37
AC055748.1-201ENST00000489836 DDX58O95786 925 aaKnown RBP12.75□□□□□ -0.37
AC055748.1-201ENST00000489836 PRELPP51888 382 aa12.75□□□□□ -0.37
AC055748.1-201ENST00000489836 SLFN5Q08AF3 891 aa12.75□□□□□ -0.37
AC055748.1-201ENST00000489836 KSR2Q6VAB6 950 aa12.75□□□□□ -0.37
AC055748.1-201ENST00000489836 TRMT2AQ8IZ69 625 aaKnown RBP12.75□□□□□ -0.37
AC055748.1-201ENST00000489836 PHTF2Q8N3S3 785 aa12.75□□□□□ -0.37
AC055748.1-201ENST00000489836 SH3TC1Q8TE82 1336 aa12.75□□□□□ -0.37
AC055748.1-201ENST00000489836 NLRP3Q96P20 1036 aa12.75□□□□□ -0.37
AC055748.1-201ENST00000489836 TRMT112Q9UI30 125 aaKnown RBP12.75□□□□□ -0.37
AC055748.1-201ENST00000489836 LTBP3Q9NS15 1303 aa12.74□□□□□ -0.37
AC055748.1-201ENST00000489836 A0A1W2PRU2 124 aa12.74□□□□□ -0.37
AC055748.1-201ENST00000489836 PI4KAP2A4QPH2 592 aa12.74□□□□□ -0.37
AC055748.1-201ENST00000489836 TMEM132AQ24JP5 1023 aa12.74□□□□□ -0.37
AC055748.1-201ENST00000489836 SOGA3Q5TF21 947 aa12.74□□□□□ -0.37
AC055748.1-201ENST00000489836 C9orf131Q5VYM1 1079 aa12.74□□□□□ -0.37
AC055748.1-201ENST00000489836 PI4KAP1Q8N8J0 262 aa12.74□□□□□ -0.37
AC055748.1-201ENST00000489836 CCDC191Q8NCU4 936 aa12.74□□□□□ -0.37
AC055748.1-201ENST00000489836 CRAMP1Q96RY5 1269 aa12.74□□□□□ -0.37
AC055748.1-201ENST00000489836 SLX4Q8IY92 1834 aa12.74□□□□□ -0.37
AC055748.1-201ENST00000489836 SNED1Q8TER0 1413 aa12.73□□□□□ -0.37
AC055748.1-201ENST00000489836 TRAK2O60296 914 aa12.73□□□□□ -0.37
AC055748.1-201ENST00000489836 LMNB1P20700 586 aa12.73□□□□□ -0.37
AC055748.1-201ENST00000489836 RASSF7Q02833 373 aa12.73□□□□□ -0.37
AC055748.1-201ENST00000489836 FLIIQ13045 1269 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms