RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 CASZ1Q86V15 1759 aa8.91□□□□□ -0.98
PRPF40A-210ENST00000489741 RGPD5Q99666 1765 aa8.91□□□□□ -0.98
PRPF40A-210ENST00000489741 ANKRD36BQ8N2N9 1353 aa8.91□□□□□ -0.98
PRPF40A-210ENST00000489741 NEURL1BA8MQ27 555 aa8.91□□□□□ -0.98
PRPF40A-210ENST00000489741 AMPD1P23109 780 aa8.91□□□□□ -0.98
PRPF40A-210ENST00000489741 ADH6P28332 368 aa8.91□□□□□ -0.98
PRPF40A-210ENST00000489741 ELOAQ14241 798 aaKnown RBP8.91□□□□□ -0.98
PRPF40A-210ENST00000489741 RTN1Q16799 776 aa8.91□□□□□ -0.98
PRPF40A-210ENST00000489741 ZNF827Q17R98 1081 aa8.91□□□□□ -0.98
PRPF40A-210ENST00000489741 EDARADDQ8WWZ3 215 aa8.91□□□□□ -0.98
PRPF40A-210ENST00000489741 ZMIZ1Q9ULJ6 1067 aa8.91□□□□□ -0.98
PRPF40A-210ENST00000489741 GOLGB1Q14789 3259 aaKnown RBP8.91□□□□□ -0.98
PRPF40A-210ENST00000489741 WNK3Q9BYP7 1800 aa8.9□□□□□ -0.98
PRPF40A-210ENST00000489741 SHISA8B8ZZ34 492 aa8.9□□□□□ -0.98
PRPF40A-210ENST00000489741 ATG7O95352 703 aa8.9□□□□□ -0.98
PRPF40A-210ENST00000489741 SWI5Q1ZZU3 235 aa8.9□□□□□ -0.98
PRPF40A-210ENST00000489741 NBPF6Q5VWK0 638 aa8.9□□□□□ -0.98
PRPF40A-210ENST00000489741 CCDC82Q8N4S0 544 aa8.9□□□□□ -0.98
PRPF40A-210ENST00000489741 ZCRB1Q8TBF4 217 aaKnown RBP8.9□□□□□ -0.98
PRPF40A-210ENST00000489741 DDX54Q8TDD1 881 aaKnown RBP8.9□□□□□ -0.98
PRPF40A-210ENST00000489741 LTV1Q96GA3 475 aaPredicted RBP8.9□□□□□ -0.98
PRPF40A-210ENST00000489741 NBPF4Q96M43 638 aa8.9□□□□□ -0.98
PRPF40A-210ENST00000489741 BRD7Q9NPI1 651 aa8.9□□□□□ -0.98
PRPF40A-210ENST00000489741 IRS1P35568 1242 aa8.89□□□□□ -0.99
PRPF40A-210ENST00000489741 AMPHP49418 695 aa8.89□□□□□ -0.99
PRPF40A-210ENST00000489741 PCBP4P57723 403 aaKnown RBP8.89□□□□□ -0.99
PRPF40A-210ENST00000489741 TYRO3Q06418 890 aa8.89□□□□□ -0.99
PRPF40A-210ENST00000489741 KCNMA1Q12791 1236 aa8.89□□□□□ -0.99
PRPF40A-210ENST00000489741 SFSWAPQ12872 951 aaKnown RBP8.89□□□□□ -0.99
PRPF40A-210ENST00000489741 ZNF468Q5VIY5 522 aaPredicted RBP8.89□□□□□ -0.99
PRPF40A-210ENST00000489741 C1orf229Q6ZS94 237 aaPredicted RBP8.89□□□□□ -0.99
PRPF40A-210ENST00000489741 PRIMPOLQ96LW4 560 aa8.89□□□□□ -0.99
PRPF40A-210ENST00000489741 RRAGCQ9HB90 399 aa8.89□□□□□ -0.99
PRPF40A-210ENST00000489741 AVENQ9NQS1 362 aaPredicted RBP8.89□□□□□ -0.99
PRPF40A-210ENST00000489741 NSD2O96028 1365 aa8.88□□□□□ -0.99
PRPF40A-210ENST00000489741 MAP3K5Q99683 1374 aa8.88□□□□□ -0.99
PRPF40A-210ENST00000489741 PRMT3O60678 531 aa8.88□□□□□ -0.99
PRPF40A-210ENST00000489741 TMF1P82094 1093 aa8.88□□□□□ -0.99
PRPF40A-210ENST00000489741 RRS1Q15050 365 aaKnown RBP8.88□□□□□ -0.99
PRPF40A-210ENST00000489741 BTLAQ7Z6A9 289 aa8.88□□□□□ -0.99
PRPF40A-210ENST00000489741 GGNBP2Q9H3C7 697 aa8.88□□□□□ -0.99
PRPF40A-210ENST00000489741 NHSQ6T4R5 1651 aa8.88□□□□□ -0.99
PRPF40A-210ENST00000489741 RTL1A6NKG5 1358 aa8.87□□□□□ -0.99
PRPF40A-210ENST00000489741 PAPPAQ13219 1627 aa8.87□□□□□ -0.99
PRPF40A-210ENST00000489741 CGNL1Q0VF96 1302 aa8.87□□□□□ -0.99
PRPF40A-210ENST00000489741 PHF20L1A8MW92 1017 aa8.87□□□□□ -0.99
PRPF40A-210ENST00000489741 EPXP11678 715 aa8.87□□□□□ -0.99
PRPF40A-210ENST00000489741 GRIN2CQ14957 1233 aa8.87□□□□□ -0.99
PRPF40A-210ENST00000489741 BEND7Q8N7W2 519 aaPredicted RBP8.87□□□□□ -0.99
PRPF40A-210ENST00000489741 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.87□□□□□ -0.991e-8■■■■■ 101
PRPF40A-210ENST00000489741 KCNH4Q9UQ05 1017 aa8.87□□□□□ -0.99
PRPF40A-210ENST00000489741 PNPLA7Q6ZV29 1317 aa8.86□□□□□ -0.99
PRPF40A-210ENST00000489741 KCNQ4P56696 695 aa8.86□□□□□ -0.99
PRPF40A-210ENST00000489741 RASSF7Q02833 373 aa8.86□□□□□ -0.99
PRPF40A-210ENST00000489741 SPEM2Q0P670 501 aa8.86□□□□□ -0.99
PRPF40A-210ENST00000489741 TRIM26Q12899 539 aaPredicted RBP8.86□□□□□ -0.99
PRPF40A-210ENST00000489741 HSP90AB2PQ58FF8 381 aa8.86□□□□□ -0.99
PRPF40A-210ENST00000489741 TMEM164Q5U3C3 297 aa8.86□□□□□ -0.99
PRPF40A-210ENST00000489741 SYT9Q86SS6 491 aa8.86□□□□□ -0.99
PRPF40A-210ENST00000489741 KLK14Q9P0G3 267 aa8.86□□□□□ -0.99
PRPF40A-210ENST00000489741 INSRP06213 1382 aa8.86□□□□□ -0.99
PRPF40A-210ENST00000489741 KIF24Q5T7B8 1368 aa8.86□□□□□ -0.99
PRPF40A-210ENST00000489741 USP47Q96K76 1375 aa8.86□□□□□ -0.99
PRPF40A-210ENST00000489741 MEGF6O75095 1541 aa8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 CNTNAP5Q8WYK1 1306 aa8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 TGFBR3LH3BV60 316 aa8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 GDF11O95390 407 aa8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 FKBP5Q13451 457 aaPredicted RBP8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 DGKZQ13574 1117 aa8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 KANK3Q6NY19 840 aa8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 FCHSD1Q86WN1 690 aa8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 TMEM151AQ8N4L1 468 aa8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 USHBP1Q8N6Y0 703 aa8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 SLC30A3Q99726 388 aa8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 KLF15Q9UIH9 416 aa8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 TIMELESSQ9UNS1 1208 aa8.85□□□□□ -0.99
PRPF40A-210ENST00000489741 LTN1O94822 1766 aa8.84□□□□□ -0.99
PRPF40A-210ENST00000489741 IER5Q5VY09 327 aa8.84□□□□□ -0.99
PRPF40A-210ENST00000489741 RAB44Q7Z6P3 723 aaPredicted RBP8.84□□□□□ -0.99
PRPF40A-210ENST00000489741 RAPGEF4Q8WZA2 1011 aa8.84□□□□□ -0.99
PRPF40A-210ENST00000489741 SYTL4Q96C24 671 aaPredicted RBP8.84□□□□□ -0.99
PRPF40A-210ENST00000489741 TFCP2L1Q9NZI6 479 aa8.84□□□□□ -0.99
PRPF40A-210ENST00000489741 MYOM1P52179 1685 aa8.84□□□□□ -0.99
PRPF40A-210ENST00000489741 FAM208AQ9UK61 1670 aaKnown RBP8.84□□□□□ -0.99
PRPF40A-210ENST00000489741 CYP27B1O15528 508 aa8.83□□□□□ -1
PRPF40A-210ENST00000489741 GSK3AP49840 483 aa8.83□□□□□ -1
PRPF40A-210ENST00000489741 SNRPNP63162 240 aaKnown RBP8.83□□□□□ -1
PRPF40A-210ENST00000489741 OCLNQ16625 522 aa8.83□□□□□ -1
PRPF40A-210ENST00000489741 COL23A1Q86Y22 540 aaPredicted RBP8.83□□□□□ -1
PRPF40A-210ENST00000489741 BTBD6Q96KE9 485 aa8.83□□□□□ -1
PRPF40A-210ENST00000489741 C1orf115Q9H7X2 142 aa8.83□□□□□ -1
PRPF40A-210ENST00000489741 CCNL1Q9UK58 526 aaPredicted RBP8.83□□□□□ -1
PRPF40A-210ENST00000489741 MKL2Q9ULH7 1088 aa8.83□□□□□ -1
PRPF40A-210ENST00000489741 BCS1LQ9Y276 419 aa8.83□□□□□ -1
PRPF40A-210ENST00000489741 FLT4P35916 1363 aa8.83□□□□□ -1
PRPF40A-210ENST00000489741 BTAF1O14981 1849 aa8.82□□□□□ -1
PRPF40A-210ENST00000489741 NCAPD2Q15021 1401 aa8.82□□□□□ -1
PRPF40A-210ENST00000489741 POLD1P28340 1107 aa8.82□□□□□ -1
PRPF40A-210ENST00000489741 CHSY3Q70JA7 882 aa8.82□□□□□ -1
PRPF40A-210ENST00000489741 MYO19Q96H55 970 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms