RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 FBXO33Q7Z6M2 555 aa12.27□□□□□ -0.44
ABCD4-214ENST00000489678 VEZTQ9HBM0 779 aa12.27□□□□□ -0.44
ABCD4-214ENST00000489678 GNL3LQ9NVN8 582 aaKnown RBP12.27□□□□□ -0.44
ABCD4-214ENST00000489678 RNF181Q9P0P0 153 aa12.27□□□□□ -0.44
ABCD4-214ENST00000489678 SKOR2Q2VWA4 1001 aaPredicted RBP12.27□□□□□ -0.45
ABCD4-214ENST00000489678 CCDC93Q567U6 631 aa12.27□□□□□ -0.45
ABCD4-214ENST00000489678 CLEC10AQ8IUN9 316 aa12.27□□□□□ -0.45
ABCD4-214ENST00000489678 TGFBRAP1Q8WUH2 860 aa12.27□□□□□ -0.45
ABCD4-214ENST00000489678 KLRG2A4D1S0 409 aaPredicted RBP12.27□□□□□ -0.45
ABCD4-214ENST00000489678 LDHBP07195 334 aaKnown RBP12.27□□□□□ -0.45
ABCD4-214ENST00000489678 ZFPM1Q8IX07 1006 aa12.27□□□□□ -0.45
ABCD4-214ENST00000489678 SH3RF3Q8TEJ3 882 aaPredicted RBP12.27□□□□□ -0.45
ABCD4-214ENST00000489678 RBM8AQ9Y5S9 174 aaKnown RBP12.27□□□□□ -0.45
ABCD4-214ENST00000489678 SLC4A4Q9Y6R1 1079 aa12.27□□□□□ -0.45
ABCD4-214ENST00000489678 SOCS7O14512 581 aa12.26□□□□□ -0.45
ABCD4-214ENST00000489678 RNF113AO15541 343 aaKnown RBP12.26□□□□□ -0.45
ABCD4-214ENST00000489678 FMR1Q06787 632 aaKnown RBP eCLIP12.26□□□□□ -0.45
ABCD4-214ENST00000489678 NFIAQ12857 509 aa12.26□□□□□ -0.45
ABCD4-214ENST00000489678 CCDC144CPQ8IYA2 1237 aa12.26□□□□□ -0.45
ABCD4-214ENST00000489678 TDRD3Q9H7E2 651 aaKnown RBP12.26□□□□□ -0.45
ABCD4-214ENST00000489678 LMBRD1Q9NUN5 540 aa12.26□□□□□ -0.45
ABCD4-214ENST00000489678 SNX14Q9Y5W7 946 aa12.26□□□□□ -0.45
ABCD4-214ENST00000489678 USP17L8P0C7I0 530 aa12.26□□□□□ -0.45
ABCD4-214ENST00000489678 ATP2B4P23634 1241 aa12.26□□□□□ -0.45
ABCD4-214ENST00000489678 MAP3K12Q12852 859 aa12.26□□□□□ -0.45
ABCD4-214ENST00000489678 CCDC84Q86UT8 332 aaPredicted RBP12.26□□□□□ -0.45
ABCD4-214ENST00000489678 PIBF1Q8WXW3 757 aa12.26□□□□□ -0.45
ABCD4-214ENST00000489678 DYNLL2Q96FJ2 89 aa12.26□□□□□ -0.45
ABCD4-214ENST00000489678 TCP10L2B9ZVM9 353 aa12.25□□□□□ -0.45
ABCD4-214ENST00000489678 EPB41L2O43491 1005 aaKnown RBP12.25□□□□□ -0.45
ABCD4-214ENST00000489678 MCM2P49736 904 aa12.25□□□□□ -0.45
ABCD4-214ENST00000489678 EIF6P56537 245 aaKnown RBP12.25□□□□□ -0.45
ABCD4-214ENST00000489678 CXCL9Q07325 125 aa12.25□□□□□ -0.45
ABCD4-214ENST00000489678 CHD4Q14839 1912 aa12.25□□□□□ -0.45
ABCD4-214ENST00000489678 ZSCAN29Q8IWY8 852 aaPredicted RBP12.25□□□□□ -0.45
ABCD4-214ENST00000489678 GRPEL1Q9HAV7 217 aa12.25□□□□□ -0.45
ABCD4-214ENST00000489678 PTMSP20962 102 aa12.25□□□□□ -0.45
ABCD4-214ENST00000489678 KLHL40Q2TBA0 621 aa12.25□□□□□ -0.45
ABCD4-214ENST00000489678 CCDC82Q8N4S0 544 aa12.25□□□□□ -0.45
ABCD4-214ENST00000489678 JDP2Q8WYK2 163 aa12.25□□□□□ -0.45
ABCD4-214ENST00000489678 COL4A5P29400 1685 aa12.25□□□□□ -0.45
ABCD4-214ENST00000489678 GOLGA6L22H0YM25 854 aa12.24□□□□□ -0.45
ABCD4-214ENST00000489678 ARID4AP29374 1257 aaPredicted RBP12.24□□□□□ -0.45
ABCD4-214ENST00000489678 TDO2P48775 406 aa12.24□□□□□ -0.45
ABCD4-214ENST00000489678 NBPF9Q3BBW0 867 aa12.24□□□□□ -0.45
ABCD4-214ENST00000489678 STYK1Q6J9G0 422 aa12.24□□□□□ -0.45
ABCD4-214ENST00000489678 RASGRP2Q7LDG7 609 aa12.24□□□□□ -0.45
ABCD4-214ENST00000489678 LEMD3Q9Y2U8 911 aa12.24□□□□□ -0.45
ABCD4-214ENST00000489678 DDX49Q9Y6V7 483 aaKnown RBP12.24□□□□□ -0.45
ABCD4-214ENST00000489678 ZNF541Q9H0D2 1346 aa12.24□□□□□ -0.45
ABCD4-214ENST00000489678 HSPD1P10809 573 aaKnown RBP12.24□□□□□ -0.45
ABCD4-214ENST00000489678 MRE11P49959 708 aa12.24□□□□□ -0.45
ABCD4-214ENST00000489678 NSUN4Q96CB9 384 aaKnown RBP12.24□□□□□ -0.45
ABCD4-214ENST00000489678 JAKMIP1Q96N16 626 aaKnown RBP12.24□□□□□ -0.45
ABCD4-214ENST00000489678 FOXP2O15409 715 aa12.24□□□□□ -0.45
ABCD4-214ENST00000489678 FGAP02671 866 aa12.24□□□□□ -0.45
ABCD4-214ENST00000489678 ADD2P35612 726 aa12.24□□□□□ -0.45
ABCD4-214ENST00000489678 MIGA2Q7L4E1 593 aa12.24□□□□□ -0.45
ABCD4-214ENST00000489678 C10orf71Q711Q0 1435 aa12.23□□□□□ -0.45
ABCD4-214ENST00000489678 RTL9Q8NET4 1388 aa12.23□□□□□ -0.45
ABCD4-214ENST00000489678 UQCRFS1P1P0C7P4 283 aa12.23□□□□□ -0.45
ABCD4-214ENST00000489678 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
ABCD4-214ENST00000489678 BTDP43251 543 aa12.23□□□□□ -0.45
ABCD4-214ENST00000489678 MCMDC2Q4G0Z9 681 aa12.23□□□□□ -0.45
ABCD4-214ENST00000489678 NIM1KQ8IY84 436 aa12.23□□□□□ -0.45
ABCD4-214ENST00000489678 TDRD7Q8NHU6 1098 aaKnown RBP12.23□□□□□ -0.45
ABCD4-214ENST00000489678 TTC14Q96N46 770 aa12.23□□□□□ -0.45
ABCD4-214ENST00000489678 MYL10Q9BUA6 226 aa12.23□□□□□ -0.45
ABCD4-214ENST00000489678 NMT2O60551 498 aa12.23□□□□□ -0.45
ABCD4-214ENST00000489678 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
ABCD4-214ENST00000489678 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
ABCD4-214ENST00000489678 IARSP41252 1262 aaKnown RBP12.23□□□□□ -0.45
ABCD4-214ENST00000489678 FAM47AQ5JRC9 791 aa12.23□□□□□ -0.45
ABCD4-214ENST00000489678 EPB41L4AQ9HCS5 686 aaPredicted RBP12.23□□□□□ -0.45
ABCD4-214ENST00000489678 ISY1Q9ULR0 285 aaKnown RBP12.23□□□□□ -0.45
ABCD4-214ENST00000489678 BRD1O95696 1058 aa12.22□□□□□ -0.45
ABCD4-214ENST00000489678 USP5P45974 858 aa12.22□□□□□ -0.45
ABCD4-214ENST00000489678 INTS4Q96HW7 963 aaKnown RBP12.22□□□□□ -0.45
ABCD4-214ENST00000489678 PRMT6Q96LA8 375 aaPredicted RBP12.22□□□□□ -0.45
ABCD4-214ENST00000489678 GPR108Q9NPR9 543 aa12.22□□□□□ -0.45
ABCD4-214ENST00000489678 MCM9Q9NXL9 1143 aa12.22□□□□□ -0.45
ABCD4-214ENST00000489678 CASZ1Q86V15 1759 aa12.22□□□□□ -0.45
ABCD4-214ENST00000489678 HTTP42858 3142 aa12.22□□□□□ -0.45
ABCD4-214ENST00000489678 MAGEB6P1A0A0J9YX57 407 aa12.22□□□□□ -0.45
ABCD4-214ENST00000489678 PRPF40AO75400 957 aaKnown RBP12.22□□□□□ -0.45
ABCD4-214ENST00000489678 CYP21A2P08686 494 aa12.22□□□□□ -0.45
ABCD4-214ENST00000489678 EAPPQ56P03 285 aaPredicted RBP12.22□□□□□ -0.45
ABCD4-214ENST00000489678 C9orf131Q5VYM1 1079 aa12.22□□□□□ -0.45
ABCD4-214ENST00000489678 CMTR1Q8N1G2 835 aaKnown RBP12.22□□□□□ -0.45
ABCD4-214ENST00000489678 GPT2Q8TD30 523 aa12.22□□□□□ -0.45
ABCD4-214ENST00000489678 SENP2Q9HC62 589 aa12.22□□□□□ -0.45
ABCD4-214ENST00000489678 BAZ2BQ9UIF8 2168 aaKnown RBP12.22□□□□□ -0.45
ABCD4-214ENST00000489678 USP17L12C9JPN9 530 aa12.21□□□□□ -0.45
ABCD4-214ENST00000489678 USP17L21D6R901 530 aa12.21□□□□□ -0.45
ABCD4-214ENST00000489678 EPS15P42566 896 aa12.21□□□□□ -0.45
ABCD4-214ENST00000489678 STOX1Q6ZVD7 989 aa12.21□□□□□ -0.45
ABCD4-214ENST00000489678 NECAB1Q8N987 351 aa12.21□□□□□ -0.45
ABCD4-214ENST00000489678 TACC3Q9Y6A5 838 aa12.21□□□□□ -0.45
ABCD4-214ENST00000489678 CCDC171Q6TFL3 1326 aa12.21□□□□□ -0.45
ABCD4-214ENST00000489678 TGFB2P61812 414 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms