RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 DACT2Q5SW24 774 aa16.9■□□□□ 0.3
VPS26A-205ENST00000489656 USP17L1Q7RTZ2 530 aa16.9■□□□□ 0.3
VPS26A-205ENST00000489656 CERS5Q8N5B7 392 aa16.9■□□□□ 0.3
VPS26A-205ENST00000489656 MIGA1Q8NAN2 632 aa16.9■□□□□ 0.3
VPS26A-205ENST00000489656 FHDC1Q9C0D6 1143 aaPredicted RBP16.9■□□□□ 0.3
VPS26A-205ENST00000489656 NFKBIEO00221 500 aa16.89■□□□□ 0.29
VPS26A-205ENST00000489656 FGAP02671 866 aa16.89■□□□□ 0.29
VPS26A-205ENST00000489656 KRT32Q14532 448 aa16.89■□□□□ 0.29
VPS26A-205ENST00000489656 LARGE2Q8N3Y3 721 aa16.89■□□□□ 0.29
VPS26A-205ENST00000489656 MRIQ9BWK5 157 aa16.89■□□□□ 0.29
VPS26A-205ENST00000489656 ZNF277Q9NRM2 450 aaPredicted RBP16.89■□□□□ 0.29
VPS26A-205ENST00000489656 MYH8P13535 1937 aa16.88■□□□□ 0.29
VPS26A-205ENST00000489656 YDJCA8MPS7 323 aa16.88■□□□□ 0.29
VPS26A-205ENST00000489656 GSG1L2A8MUP6 293 aa16.88■□□□□ 0.29
VPS26A-205ENST00000489656 CYP21A2P08686 494 aa16.88■□□□□ 0.29
VPS26A-205ENST00000489656 BECN1Q14457 450 aa16.88■□□□□ 0.29
VPS26A-205ENST00000489656 GIMAP6Q6P9H5 292 aa16.88■□□□□ 0.29
VPS26A-205ENST00000489656 GPR75-ASB3A0A0A6YYF3 556 aa16.87■□□□□ 0.29
VPS26A-205ENST00000489656 BAG3O95817 575 aa16.87■□□□□ 0.29
VPS26A-205ENST00000489656 PSMA5P28066 241 aa16.87■□□□□ 0.29
VPS26A-205ENST00000489656 DYNLL1P63167 89 aaKnown RBP16.87■□□□□ 0.29
VPS26A-205ENST00000489656 HDLBPQ00341 1268 aaKnown RBP16.87■□□□□ 0.29
VPS26A-205ENST00000489656 DIXDC1Q155Q3 683 aa16.87■□□□□ 0.29
VPS26A-205ENST00000489656 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
VPS26A-205ENST00000489656 FBXW7Q969H0 707 aa16.87■□□□□ 0.29
VPS26A-205ENST00000489656 CRNKL1Q9BZJ0 848 aaKnown RBP16.87■□□□□ 0.29
VPS26A-205ENST00000489656 NACAP1Q9BZK3 213 aa16.87■□□□□ 0.29
VPS26A-205ENST00000489656 EPB41L4AQ9HCS5 686 aaPredicted RBP16.87■□□□□ 0.29
VPS26A-205ENST00000489656 KCNQ5Q9NR82 932 aa16.87■□□□□ 0.29
VPS26A-205ENST00000489656 ZNRF3Q9ULT6 936 aa16.87■□□□□ 0.29
VPS26A-205ENST00000489656 SLC4A4Q9Y6R1 1079 aa16.87■□□□□ 0.29
VPS26A-205ENST00000489656 MYO3BQ8WXR4 1341 aa16.87■□□□□ 0.29
VPS26A-205ENST00000489656 ST18O60284 1047 aa16.86■□□□□ 0.29
VPS26A-205ENST00000489656 IMMTQ16891 758 aaKnown RBP16.86■□□□□ 0.29
VPS26A-205ENST00000489656 HHIPL2Q6UWX4 724 aa16.86■□□□□ 0.29
VPS26A-205ENST00000489656 NIM1KQ8IY84 436 aa16.86■□□□□ 0.29
VPS26A-205ENST00000489656 NOL10Q9BSC4 688 aaKnown RBP16.86■□□□□ 0.29
VPS26A-205ENST00000489656 SYT17Q9BSW7 474 aa16.86■□□□□ 0.29
VPS26A-205ENST00000489656 ZSWIM6Q9HCJ5 1215 aa16.86■□□□□ 0.29
VPS26A-205ENST00000489656 AATFQ9NY61 560 aaKnown RBP eCLIP16.86■□□□□ 0.29
VPS26A-205ENST00000489656 TTF2Q9UNY4 1162 aaKnown RBP16.86■□□□□ 0.29
VPS26A-205ENST00000489656 GOLGB1Q14789 3259 aaKnown RBP16.85■□□□□ 0.29
VPS26A-205ENST00000489656 PRKAB2O43741 272 aa16.85■□□□□ 0.29
VPS26A-205ENST00000489656 APPP05067 770 aa16.85■□□□□ 0.29
VPS26A-205ENST00000489656 VIL1P09327 827 aaKnown RBP16.85■□□□□ 0.29
VPS26A-205ENST00000489656 PLCG2P16885 1265 aa16.85■□□□□ 0.29
VPS26A-205ENST00000489656 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
VPS26A-205ENST00000489656 JAKMIP1Q96N16 626 aaKnown RBP16.85■□□□□ 0.29
VPS26A-205ENST00000489656 TBC1D2Q9BYX2 928 aa16.85■□□□□ 0.29
VPS26A-205ENST00000489656 NAPBQ9H115 298 aa16.85■□□□□ 0.29
VPS26A-205ENST00000489656 ATP8A2Q9NTI2 1148 aa16.85■□□□□ 0.29
VPS26A-205ENST00000489656 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
VPS26A-205ENST00000489656 ZNF213O14771 459 aa16.84■□□□□ 0.29
VPS26A-205ENST00000489656 NEK4P51957 841 aa16.84■□□□□ 0.29
VPS26A-205ENST00000489656 TTC14Q96N46 770 aa16.84■□□□□ 0.29
VPS26A-205ENST00000489656 MXD3Q9BW11 206 aa16.84■□□□□ 0.29
VPS26A-205ENST00000489656 DAGLAQ9Y4D2 1042 aa16.84■□□□□ 0.29
VPS26A-205ENST00000489656 E7EWF7 191 aa16.83■□□□□ 0.28
VPS26A-205ENST00000489656 HMGB1P09429 215 aaKnown RBP16.83■□□□□ 0.28
VPS26A-205ENST00000489656 CASTP20810 708 aaKnown RBP16.83■□□□□ 0.28
VPS26A-205ENST00000489656 BTDP43251 543 aa16.83■□□□□ 0.28
VPS26A-205ENST00000489656 MCM2P49736 904 aa16.83■□□□□ 0.28
VPS26A-205ENST00000489656 RSBN1LQ6PCB5 846 aaPredicted RBP16.83■□□□□ 0.28
VPS26A-205ENST00000489656 STOX1Q6ZVD7 989 aa16.83■□□□□ 0.28
VPS26A-205ENST00000489656 RUFY3Q7L099 469 aa16.83■□□□□ 0.28
VPS26A-205ENST00000489656 HSCBQ8IWL3 235 aa16.83■□□□□ 0.28
VPS26A-205ENST00000489656 SDR42E1Q8WUS8 393 aa16.83■□□□□ 0.28
VPS26A-205ENST00000489656 JDP2Q8WYK2 163 aa16.83■□□□□ 0.28
VPS26A-205ENST00000489656 TEKT1Q969V4 418 aa16.83■□□□□ 0.28
VPS26A-205ENST00000489656 GMLQ99445 158 aa16.83■□□□□ 0.28
VPS26A-205ENST00000489656 ALDH8A1Q9H2A2 487 aaPredicted RBP16.83■□□□□ 0.28
VPS26A-205ENST00000489656 ANAPC4Q9UJX5 808 aa16.83■□□□□ 0.28
VPS26A-205ENST00000489656 CYP46A1Q9Y6A2 500 aa16.83■□□□□ 0.28
VPS26A-205ENST00000489656 CD2BP2O95400 341 aaKnown RBP16.82■□□□□ 0.28
VPS26A-205ENST00000489656 TDO2P48775 406 aa16.82■□□□□ 0.28
VPS26A-205ENST00000489656 RHBDL3P58872 404 aa16.82■□□□□ 0.28
VPS26A-205ENST00000489656 BLOC1S2Q6QNY1 142 aa16.82■□□□□ 0.28
VPS26A-205ENST00000489656 ZDHHC15Q96MV8 337 aa16.82■□□□□ 0.28
VPS26A-205ENST00000489656 NEK1Q96PY6 1258 aa16.82■□□□□ 0.28
VPS26A-205ENST00000489656 NBPF3Q9H094 633 aa16.82■□□□□ 0.28
VPS26A-205ENST00000489656 DCP1AQ9NPI6 582 aaPredicted RBP16.82■□□□□ 0.28
VPS26A-205ENST00000489656 MKRN1Q9UHC7 482 aaKnown RBP16.82■□□□□ 0.28
VPS26A-205ENST00000489656 SERPINA10Q9UK55 444 aa16.82■□□□□ 0.28
VPS26A-205ENST00000489656 ZBTB12Q9Y330 459 aaPredicted RBP16.82■□□□□ 0.28
VPS26A-205ENST00000489656 PSMD14O00487 310 aa16.81■□□□□ 0.28
VPS26A-205ENST00000489656 RPS6KB1P23443 525 aa16.81■□□□□ 0.28
VPS26A-205ENST00000489656 MMP14P50281 582 aa16.81■□□□□ 0.28
VPS26A-205ENST00000489656 RASSF7Q02833 373 aa16.81■□□□□ 0.28
VPS26A-205ENST00000489656 MKRN4PQ13434 485 aaPredicted RBP16.81■□□□□ 0.28
VPS26A-205ENST00000489656 SBK1Q52WX2 424 aa16.81■□□□□ 0.28
VPS26A-205ENST00000489656 AGBL3Q8NEM8 1001 aa16.81■□□□□ 0.28
VPS26A-205ENST00000489656 SH3RF3Q8TEJ3 882 aaPredicted RBP16.81■□□□□ 0.28
VPS26A-205ENST00000489656 UPF3BQ9BZI7 483 aaKnown RBP16.81■□□□□ 0.28
VPS26A-205ENST00000489656 F8W031 263 aaPredicted RBP16.8■□□□□ 0.28
VPS26A-205ENST00000489656 K7ELQ4 463 aaPredicted RBP16.8■□□□□ 0.28
VPS26A-205ENST00000489656 CRKP46108 304 aa16.8■□□□□ 0.28
VPS26A-205ENST00000489656 PRELPP51888 382 aa16.8■□□□□ 0.28
VPS26A-205ENST00000489656 HAND2P61296 217 aa16.8■□□□□ 0.28
VPS26A-205ENST00000489656 CXCL9Q07325 125 aa16.8■□□□□ 0.28
VPS26A-205ENST00000489656 KIAA0825Q8IV33 1275 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms