RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 ZNF408Q9H9D4 720 aa9.59□□□□□ -0.87
SSR1-210ENST00000489567 RAI14Q9P0K7 980 aa9.59□□□□□ -0.87
SSR1-210ENST00000489567 LRP2BPQ9P2M1 347 aa9.59□□□□□ -0.87
SSR1-210ENST00000489567 GAKO14976 1311 aa9.59□□□□□ -0.87
SSR1-210ENST00000489567 SALL3Q9BXA9 1300 aa9.59□□□□□ -0.87
SSR1-210ENST00000489567 ECM29Q5VYK3 1845 aa9.58□□□□□ -0.88
SSR1-210ENST00000489567 GOLIM4O00461 696 aa9.58□□□□□ -0.88
SSR1-210ENST00000489567 MYO1BO43795 1136 aa9.58□□□□□ -0.88
SSR1-210ENST00000489567 CELF2O95319 508 aaKnown RBP9.58□□□□□ -0.88
SSR1-210ENST00000489567 CDC42EP5Q6NZY7 148 aa9.58□□□□□ -0.88
SSR1-210ENST00000489567 ADGRA1Q86SQ6 560 aa9.58□□□□□ -0.88
SSR1-210ENST00000489567 CDAN1Q8IWY9 1227 aa9.58□□□□□ -0.88
SSR1-210ENST00000489567 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.58□□□□□ -0.88
SSR1-210ENST00000489567 HAUS7Q99871 368 aa9.58□□□□□ -0.88
SSR1-210ENST00000489567 LNPKQ9C0E8 428 aa9.58□□□□□ -0.88
SSR1-210ENST00000489567 DEFB129Q9H1M3 183 aa9.58□□□□□ -0.88
SSR1-210ENST00000489567 ECHDC1Q9NTX5 307 aa9.58□□□□□ -0.88
SSR1-210ENST00000489567 MYH2Q9UKX2 1941 aa9.58□□□□□ -0.88
SSR1-210ENST00000489567 TMEM88BA6NKF7 163 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 TCP10L2B9ZVM9 353 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 IDH1O75874 414 aaKnown RBP9.57□□□□□ -0.88
SSR1-210ENST00000489567 CHGBP05060 677 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 RASA3Q14644 834 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 APOBEC3FQ8IUX4 373 aaKnown RBP9.57□□□□□ -0.88
SSR1-210ENST00000489567 FAM163AQ96GL9 167 aaPredicted RBP9.57□□□□□ -0.88
SSR1-210ENST00000489567 MROH7-TTC4A0A0A0MT08 1334 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 CNTNAP1P78357 1384 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 BTDP43251 543 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 NUCB1Q02818 461 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 NFIAQ12857 509 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 SLFNL1Q499Z3 407 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 PI4K2BQ8TCG2 481 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 TMEM39BQ9GZU3 492 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 CREBZFQ9NS37 354 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 FZD1Q9UP38 647 aa9.57□□□□□ -0.88
SSR1-210ENST00000489567 DOCK2Q92608 1830 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 TRPM7Q96QT4 1865 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 SSC5DA1L4H1 1573 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 GPR75-ASB3A0A0A6YYF3 556 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 MX1P20591 662 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 RHBDL3P58872 404 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 NAA16Q6N069 864 aaPredicted RBP9.56□□□□□ -0.88
SSR1-210ENST00000489567 MOB2Q70IA6 237 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 CHD1LQ86WJ1 897 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 DNAJC5GQ8N7S2 189 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 MAGEB6Q8N7X4 407 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 TEPSINQ96N21 525 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 USP40Q9NVE5 1235 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 PAG1Q9NWQ8 432 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 MAST2Q6P0Q8 1798 aa9.56□□□□□ -0.88
SSR1-210ENST00000489567 WDHD1O75717 1129 aaPredicted RBP9.55□□□□□ -0.88
SSR1-210ENST00000489567 MAP4K4O95819 1239 aaPredicted RBP9.55□□□□□ -0.88
SSR1-210ENST00000489567 TCP10Q12799 353 aa9.55□□□□□ -0.88
SSR1-210ENST00000489567 NBPF12Q5TAG4 269 aaPredicted RBP9.55□□□□□ -0.88
SSR1-210ENST00000489567 ZFPM1Q8IX07 1006 aa9.55□□□□□ -0.88
SSR1-210ENST00000489567 FAM198AQ9UFP1 575 aa9.55□□□□□ -0.88
SSR1-210ENST00000489567 RFX7Q2KHR2 1363 aa9.55□□□□□ -0.88
SSR1-210ENST00000489567 CYP7A1P22680 504 aa9.55□□□□□ -0.88
SSR1-210ENST00000489567 PDE1AP54750 535 aa9.55□□□□□ -0.88
SSR1-210ENST00000489567 DYNLL1P63167 89 aaKnown RBP9.55□□□□□ -0.88
SSR1-210ENST00000489567 GSTO1P78417 241 aa9.55□□□□□ -0.88
SSR1-210ENST00000489567 SAPCD2Q86UD0 394 aa9.55□□□□□ -0.88
SSR1-210ENST00000489567 SLF2Q8IX21 1173 aa9.55□□□□□ -0.88
SSR1-210ENST00000489567 GBA2Q9HCG7 927 aaPredicted RBP9.55□□□□□ -0.88
SSR1-210ENST00000489567 DDX4Q9NQI0 724 aaKnown RBP9.55□□□□□ -0.88
SSR1-210ENST00000489567 AATFQ9NY61 560 aaKnown RBP eCLIP9.55□□□□□ -0.88
SSR1-210ENST00000489567 STAP2Q9UGK3 403 aa9.55□□□□□ -0.88
SSR1-210ENST00000489567 ABT1Q9ULW3 272 aaKnown RBP9.55□□□□□ -0.88
SSR1-210ENST00000489567 TLL2Q9Y6L7 1015 aa9.55□□□□□ -0.88
SSR1-210ENST00000489567 TTC41PQ6P2S7 1318 aa9.55□□□□□ -0.88
SSR1-210ENST00000489567 TCRBV5S4A2TA0A5A2 114 aa9.54□□□□□ -0.88
SSR1-210ENST00000489567 LDHCP07864 332 aa9.54□□□□□ -0.88
SSR1-210ENST00000489567 PDE6AP16499 860 aa9.54□□□□□ -0.88
SSR1-210ENST00000489567 MAP3K12Q12852 859 aa9.54□□□□□ -0.88
SSR1-210ENST00000489567 TNFAIP1Q13829 316 aa9.54□□□□□ -0.88
SSR1-210ENST00000489567 PRKG1Q13976 671 aa9.54□□□□□ -0.88
SSR1-210ENST00000489567 TTF1Q15361 905 aaPredicted RBP9.54□□□□□ -0.88
SSR1-210ENST00000489567 SLC9C2Q5TAH2 1124 aa9.54□□□□□ -0.88
SSR1-210ENST00000489567 FKBP1CQ5VVH2 108 aa9.54□□□□□ -0.88
SSR1-210ENST00000489567 MIGA1Q8NAN2 632 aa9.54□□□□□ -0.88
SSR1-210ENST00000489567 SH3RF3Q8TEJ3 882 aaPredicted RBP9.54□□□□□ -0.88
SSR1-210ENST00000489567 GPATCH3Q96I76 525 aa9.54□□□□□ -0.88
SSR1-210ENST00000489567 TMOD2Q9NZR1 351 aa9.54□□□□□ -0.88
SSR1-210ENST00000489567 ZBTB47Q9UFB7 747 aaPredicted RBP9.54□□□□□ -0.88
SSR1-210ENST00000489567 MKRN1Q9UHC7 482 aaKnown RBP9.54□□□□□ -0.88
SSR1-210ENST00000489567 PPP2R3BQ9Y5P8 575 aa9.54□□□□□ -0.88
SSR1-210ENST00000489567 ZNF532Q9HCE3 1301 aa9.53□□□□□ -0.88
SSR1-210ENST00000489567 RASSF10A6NK89 507 aa9.53□□□□□ -0.88
SSR1-210ENST00000489567 GLRX3O76003 335 aaKnown RBP9.53□□□□□ -0.88
SSR1-210ENST00000489567 PDE4AP27815 886 aa9.53□□□□□ -0.88
SSR1-210ENST00000489567 RGS3P49796 1198 aa9.53□□□□□ -0.88
SSR1-210ENST00000489567 PPP4CP60510 307 aa9.53□□□□□ -0.88
SSR1-210ENST00000489567 FAM83AQ86UY5 434 aa9.53□□□□□ -0.88
SSR1-210ENST00000489567 PLEKHM2Q8IWE5 1019 aa9.53□□□□□ -0.88
SSR1-210ENST00000489567 IDI2Q9BXS1 227 aa9.53□□□□□ -0.88
SSR1-210ENST00000489567 PCNTO95613 3336 aa9.53□□□□□ -0.88
SSR1-210ENST00000489567 UBE2Q2LH0YL09 131 aa9.53□□□□□ -0.88
SSR1-210ENST00000489567 SLURP2P0DP57 97 aa9.53□□□□□ -0.88
SSR1-210ENST00000489567 ADD2P35612 726 aa9.53□□□□□ -0.88
SSR1-210ENST00000489567 TNNI2P48788 182 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms