RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 MAGEB6P1A0A0J9YX57 407 aa17.14■□□□□ 0.33
CLDN11-209ENST00000489485 SPDYE2BA6NHP3 402 aa17.14■□□□□ 0.33
CLDN11-209ENST00000489485 POTECB2RU33 542 aa17.14■□□□□ 0.33
CLDN11-209ENST00000489485 WNT10BO00744 389 aa17.14■□□□□ 0.33
CLDN11-209ENST00000489485 SPDYE6P0CI01 402 aa17.14■□□□□ 0.33
CLDN11-209ENST00000489485 NBPF9Q3BBW0 867 aa17.14■□□□□ 0.33
CLDN11-209ENST00000489485 ZMYM1Q5SVZ6 1142 aa17.14■□□□□ 0.33
CLDN11-209ENST00000489485 APOBEC3HQ6NTF7 200 aaKnown RBP17.14■□□□□ 0.33
CLDN11-209ENST00000489485 AIDAQ96BJ3 306 aa17.14■□□□□ 0.33
CLDN11-209ENST00000489485 MYO1BO43795 1136 aa17.13■□□□□ 0.33
CLDN11-209ENST00000489485 VEGFAP15692 232 aaPredicted RBP17.13■□□□□ 0.33
CLDN11-209ENST00000489485 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
CLDN11-209ENST00000489485 MTMR14Q8NCE2 650 aa17.13■□□□□ 0.33
CLDN11-209ENST00000489485 TRPM4Q8TD43 1214 aa17.13■□□□□ 0.33
CLDN11-209ENST00000489485 TDRD3Q9H7E2 651 aaKnown RBP17.13■□□□□ 0.33
CLDN11-209ENST00000489485 TSHZ2Q9NRE2 1034 aa17.13■□□□□ 0.33
CLDN11-209ENST00000489485 MBD4O95243 580 aa17.12■□□□□ 0.33
CLDN11-209ENST00000489485 BACH2Q9BYV9 841 aa17.12■□□□□ 0.33
CLDN11-209ENST00000489485 TAF1DQ9H5J8 278 aaPredicted RBP17.12■□□□□ 0.33
CLDN11-209ENST00000489485 NMRK2Q9NPI5 230 aa17.12■□□□□ 0.33
CLDN11-209ENST00000489485 HELLSQ9NRZ9 838 aa17.12■□□□□ 0.33
CLDN11-209ENST00000489485 M0R2C6 588 aa17.12■□□□□ 0.33
CLDN11-209ENST00000489485 YY1P25490 414 aa17.12■□□□□ 0.33
CLDN11-209ENST00000489485 MCMDC2Q4G0Z9 681 aa17.12■□□□□ 0.33
CLDN11-209ENST00000489485 EAPPQ56P03 285 aaPredicted RBP17.12■□□□□ 0.33
CLDN11-209ENST00000489485 ARMT1Q9H993 441 aa17.12■□□□□ 0.33
CLDN11-209ENST00000489485 USP40Q9NVE5 1235 aa17.12■□□□□ 0.33
CLDN11-209ENST00000489485 CLRN2A0PK11 232 aa17.11■□□□□ 0.33
CLDN11-209ENST00000489485 HIRAP54198 1017 aaPredicted RBP17.11■□□□□ 0.33
CLDN11-209ENST00000489485 CDC42EP5Q6NZY7 148 aa17.11■□□□□ 0.33
CLDN11-209ENST00000489485 LCORLQ8N3X6 602 aa17.11■□□□□ 0.33
CLDN11-209ENST00000489485 SH3RF3Q8TEJ3 882 aaPredicted RBP17.11■□□□□ 0.33
CLDN11-209ENST00000489485 RUFY2Q8WXA3 655 aa17.11■□□□□ 0.33
CLDN11-209ENST00000489485 RIOK1Q9BRS2 568 aaKnown RBP17.11■□□□□ 0.33
CLDN11-209ENST00000489485 GPBP1L1Q9HC44 474 aaPredicted RBP17.11■□□□□ 0.33
CLDN11-209ENST00000489485 ECM29Q5VYK3 1845 aa17.11■□□□□ 0.33
CLDN11-209ENST00000489485 GPAA1O43292 621 aa17.1■□□□□ 0.33
CLDN11-209ENST00000489485 SEC24BO95487 1268 aa17.1■□□□□ 0.33
CLDN11-209ENST00000489485 PLCG2P16885 1265 aa17.1■□□□□ 0.33
CLDN11-209ENST00000489485 PPP4CP60510 307 aa17.1■□□□□ 0.33
CLDN11-209ENST00000489485 CCDC129Q6ZRS4 1044 aa17.1■□□□□ 0.33
CLDN11-209ENST00000489485 USP50Q70EL3 339 aaPredicted RBP17.1■□□□□ 0.33
CLDN11-209ENST00000489485 PNMA8AQ86V59 439 aaPredicted RBP17.1■□□□□ 0.33
CLDN11-209ENST00000489485 ZBED3Q96IU2 234 aaPredicted RBP17.1■□□□□ 0.33
CLDN11-209ENST00000489485 IL25Q9H293 177 aa17.1■□□□□ 0.33
CLDN11-209ENST00000489485 CACNB3P54284 484 aa17.1■□□□□ 0.33
CLDN11-209ENST00000489485 CERS3Q8IU89 383 aa17.1■□□□□ 0.33
CLDN11-209ENST00000489485 VEZTQ9HBM0 779 aa17.1■□□□□ 0.33
CLDN11-209ENST00000489485 TMOD2Q9NZR1 351 aa17.1■□□□□ 0.33
CLDN11-209ENST00000489485 ASTN2O75129 1339 aaPredicted RBP17.09■□□□□ 0.33
CLDN11-209ENST00000489485 RHBDL3P58872 404 aa17.09■□□□□ 0.33
CLDN11-209ENST00000489485 TEX11Q8IYF3 940 aa17.09■□□□□ 0.33
CLDN11-209ENST00000489485 ESYT1Q9BSJ8 1104 aa17.09■□□□□ 0.33
CLDN11-209ENST00000489485 ZNF70Q9UC06 446 aaPredicted RBP17.09■□□□□ 0.33
CLDN11-209ENST00000489485 ZNF589Q86UQ0 364 aaPredicted RBP17.08■□□□□ 0.33
CLDN11-209ENST00000489485 STRBPQ96SI9 672 aaKnown RBP17.08■□□□□ 0.33
CLDN11-209ENST00000489485 CRNKL1Q9BZJ0 848 aaKnown RBP17.08■□□□□ 0.33
CLDN11-209ENST00000489485 CLEC11AQ9Y240 323 aa17.08■□□□□ 0.33
CLDN11-209ENST00000489485 POLR2AP24928 1970 aaKnown RBP17.08■□□□□ 0.32
CLDN11-209ENST00000489485 CDK5RAP2Q96SN8 1893 aa17.08■□□□□ 0.32
CLDN11-209ENST00000489485 MFAP1P55081 439 aaKnown RBP17.07■□□□□ 0.32
CLDN11-209ENST00000489485 PICALMQ13492 652 aa17.07■□□□□ 0.32
CLDN11-209ENST00000489485 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
CLDN11-209ENST00000489485 ANGEL2Q5VTE6 544 aaKnown RBP17.07■□□□□ 0.32
CLDN11-209ENST00000489485 SDR42E1Q8WUS8 393 aa17.07■□□□□ 0.32
CLDN11-209ENST00000489485 GGA3Q9NZ52 723 aa17.07■□□□□ 0.32
CLDN11-209ENST00000489485 SLC4A4Q9Y6R1 1079 aa17.07■□□□□ 0.32
CLDN11-209ENST00000489485 CCDC171Q6TFL3 1326 aa17.07■□□□□ 0.32
CLDN11-209ENST00000489485 SGSM2O43147 1006 aa17.07■□□□□ 0.32
CLDN11-209ENST00000489485 APPP05067 770 aa17.07■□□□□ 0.32
CLDN11-209ENST00000489485 USP5P45974 858 aa17.07■□□□□ 0.32
CLDN11-209ENST00000489485 TGFBRAP1Q8WUH2 860 aa17.07■□□□□ 0.32
CLDN11-209ENST00000489485 SCAF8Q9UPN6 1271 aaKnown RBP17.07■□□□□ 0.32
CLDN11-209ENST00000489485 RAD50Q92878 1312 aa17.07■□□□□ 0.32
CLDN11-209ENST00000489485 TCP10L2B9ZVM9 353 aa17.06■□□□□ 0.32
CLDN11-209ENST00000489485 PRKAB2O43741 272 aa17.06■□□□□ 0.32
CLDN11-209ENST00000489485 POTEIP0CG38 1075 aa17.06■□□□□ 0.32
CLDN11-209ENST00000489485 POTEJP0CG39 1038 aa17.06■□□□□ 0.32
CLDN11-209ENST00000489485 NFIAQ12857 509 aa17.06■□□□□ 0.32
CLDN11-209ENST00000489485 WDHD1O75717 1129 aaPredicted RBP17.05■□□□□ 0.32
CLDN11-209ENST00000489485 GNAT2P19087 354 aa17.05■□□□□ 0.32
CLDN11-209ENST00000489485 TCP10Q12799 353 aa17.05■□□□□ 0.32
CLDN11-209ENST00000489485 MAPKAPK5Q8IW41 473 aa17.05■□□□□ 0.32
CLDN11-209ENST00000489485 DCPSQ96C86 337 aaKnown RBP17.05■□□□□ 0.32
CLDN11-209ENST00000489485 VPS53Q5VIR6 699 aa17.05■□□□□ 0.32
CLDN11-209ENST00000489485 ZC3H15Q8WU90 426 aaKnown RBP17.05■□□□□ 0.32
CLDN11-209ENST00000489485 FOCADQ5VW36 1801 aa17.05■□□□□ 0.32
CLDN11-209ENST00000489485 BAZ2AQ9UIF9 1905 aaKnown RBP17.04■□□□□ 0.32
CLDN11-209ENST00000489485 TNFAIP1Q13829 316 aa17.04■□□□□ 0.32
CLDN11-209ENST00000489485 KIAA1211Q6ZU35 1233 aa17.04■□□□□ 0.32
CLDN11-209ENST00000489485 DDRGK1Q96HY6 314 aa17.04■□□□□ 0.32
CLDN11-209ENST00000489485 IDI2Q9BXS1 227 aa17.04■□□□□ 0.32
CLDN11-209ENST00000489485 ANO2Q9NQ90 1003 aa17.04■□□□□ 0.32
CLDN11-209ENST00000489485 DDX4Q9NQI0 724 aaKnown RBP17.04■□□□□ 0.32
CLDN11-209ENST00000489485 PATL2C9JE40 543 aaKnown RBP17.03■□□□□ 0.32
CLDN11-209ENST00000489485 HSPD1P10809 573 aaKnown RBP17.03■□□□□ 0.32
CLDN11-209ENST00000489485 TNNI2P48788 182 aa17.03■□□□□ 0.32
CLDN11-209ENST00000489485 APOBEC3FQ8IUX4 373 aaKnown RBP17.03■□□□□ 0.32
CLDN11-209ENST00000489485 FAM198AQ9UFP1 575 aa17.03■□□□□ 0.32
CLDN11-209ENST00000489485 FLT1P17948 1338 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms