RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 SYT17Q9BSW7 474 aa24.87■■□□□ 1.57
SND1-214ENST00000489417 CRNKL1Q9BZJ0 848 aaKnown RBP24.87■■□□□ 1.57
SND1-214ENST00000489417 NAPBQ9H115 298 aa24.87■■□□□ 1.57
SND1-214ENST00000489417 ZNRF3Q9ULT6 936 aa24.87■■□□□ 1.57
SND1-214ENST00000489417 PSME4Q14997 1843 aa24.87■■□□□ 1.57
SND1-214ENST00000489417 MYH2Q9UKX2 1941 aa24.87■■□□□ 1.57
SND1-214ENST00000489417 NEK4P51957 841 aa24.86■■□□□ 1.57
SND1-214ENST00000489417 IL27Q8NEV9 243 aa24.86■■□□□ 1.57
SND1-214ENST00000489417 TBC1D2Q9BYX2 928 aa24.86■■□□□ 1.57
SND1-214ENST00000489417 GPR75-ASB3A0A0A6YYF3 556 aa24.86■■□□□ 1.57
SND1-214ENST00000489417 ST18O60284 1047 aa24.86■■□□□ 1.57
SND1-214ENST00000489417 PSMA5P28066 241 aa24.86■■□□□ 1.57
SND1-214ENST00000489417 BTDP43251 543 aa24.86■■□□□ 1.57
SND1-214ENST00000489417 TDO2P48775 406 aa24.86■■□□□ 1.57
SND1-214ENST00000489417 RASSF7Q02833 373 aa24.86■■□□□ 1.57
SND1-214ENST00000489417 HSCBQ8IWL3 235 aa24.86■■□□□ 1.57
SND1-214ENST00000489417 UPF3BQ9BZI7 483 aaKnown RBP24.86■■□□□ 1.57
SND1-214ENST00000489417 ZNF213O14771 459 aa24.85■■□□□ 1.57
SND1-214ENST00000489417 CASTP20810 708 aaKnown RBP24.85■■□□□ 1.57
SND1-214ENST00000489417 SDR42E1Q8WUS8 393 aa24.85■■□□□ 1.57
SND1-214ENST00000489417 ZSWIM6Q9HCJ5 1215 aa24.85■■□□□ 1.57
SND1-214ENST00000489417 DAGLAQ9Y4D2 1042 aa24.85■■□□□ 1.57
SND1-214ENST00000489417 RAD17O75943 681 aa24.84■■□□□ 1.57
SND1-214ENST00000489417 HAND2P61296 217 aa24.84■■□□□ 1.57
SND1-214ENST00000489417 GIMAP6Q6P9H5 292 aa24.84■■□□□ 1.57
SND1-214ENST00000489417 JDP2Q8WYK2 163 aa24.84■■□□□ 1.57
SND1-214ENST00000489417 LAMA4Q16363 1823 aa24.83■■□□□ 1.57
SND1-214ENST00000489417 MYO3BQ8WXR4 1341 aa24.83■■□□□ 1.57
SND1-214ENST00000489417 CD2BP2O95400 341 aaKnown RBP24.83■■□□□ 1.57
SND1-214ENST00000489417 PLCG2P16885 1265 aa24.83■■□□□ 1.57
SND1-214ENST00000489417 SCNN1DP51172 638 aa24.83■■□□□ 1.57
SND1-214ENST00000489417 HHIPL2Q6UWX4 724 aa24.83■■□□□ 1.57
SND1-214ENST00000489417 STOX1Q6ZVD7 989 aa24.83■■□□□ 1.57
SND1-214ENST00000489417 KIAA0825Q8IV33 1275 aa24.83■■□□□ 1.57
SND1-214ENST00000489417 SH3RF3Q8TEJ3 882 aaPredicted RBP24.83■■□□□ 1.57
SND1-214ENST00000489417 ATP8A2Q9NTI2 1148 aa24.83■■□□□ 1.57
SND1-214ENST00000489417 DAXXQ9UER7 740 aaPredicted RBP24.83■■□□□ 1.57
SND1-214ENST00000489417 PSMD14O00487 310 aa24.82■■□□□ 1.56
SND1-214ENST00000489417 VIL1P09327 827 aaKnown RBP24.82■■□□□ 1.56
SND1-214ENST00000489417 HDLBPQ00341 1268 aaKnown RBP24.82■■□□□ 1.56
SND1-214ENST00000489417 RSBN1LQ6PCB5 846 aaPredicted RBP24.82■■□□□ 1.56
SND1-214ENST00000489417 TEKT1Q969V4 418 aa24.82■■□□□ 1.56
SND1-214ENST00000489417 MRIQ9BWK5 157 aa24.82■■□□□ 1.56
SND1-214ENST00000489417 CYP46A1Q9Y6A2 500 aa24.82■■□□□ 1.56
SND1-214ENST00000489417 E7EWF7 191 aa24.81■■□□□ 1.56
SND1-214ENST00000489417 BLOC1S2Q6QNY1 142 aa24.81■■□□□ 1.56
SND1-214ENST00000489417 NEK1Q96PY6 1258 aa24.81■■□□□ 1.56
SND1-214ENST00000489417 CPA1P15085 419 aa24.8■■□□□ 1.56
SND1-214ENST00000489417 CRKP46108 304 aa24.8■■□□□ 1.56
SND1-214ENST00000489417 RUFY3Q7L099 469 aa24.8■■□□□ 1.56
SND1-214ENST00000489417 DCP1AQ9NPI6 582 aaPredicted RBP24.8■■□□□ 1.56
SND1-214ENST00000489417 USP5P45974 858 aa24.79■■□□□ 1.56
SND1-214ENST00000489417 SLC4A3P48751 1232 aa24.79■■□□□ 1.56
SND1-214ENST00000489417 CXCL9Q07325 125 aa24.79■■□□□ 1.56
SND1-214ENST00000489417 ARHGAP27Q6ZUM4 889 aa24.79■■□□□ 1.56
SND1-214ENST00000489417 TTC14Q96N46 770 aa24.79■■□□□ 1.56
SND1-214ENST00000489417 NBPF3Q9H094 633 aa24.79■■□□□ 1.56
SND1-214ENST00000489417 TIAM2Q8IVF5 1701 aa24.79■■□□□ 1.56
SND1-214ENST00000489417 RPS6KB1P23443 525 aa24.78■■□□□ 1.56
SND1-214ENST00000489417 MCM2P49736 904 aa24.78■■□□□ 1.56
SND1-214ENST00000489417 PRELPP51888 382 aa24.78■■□□□ 1.56
SND1-214ENST00000489417 RHBDL3P58872 404 aa24.78■■□□□ 1.56
SND1-214ENST00000489417 CIAPIN1Q6FI81 312 aa24.78■■□□□ 1.56
SND1-214ENST00000489417 TBC1D10CQ8IV04 446 aa24.78■■□□□ 1.56
SND1-214ENST00000489417 TEX11Q8IYF3 940 aa24.78■■□□□ 1.56
SND1-214ENST00000489417 PDRG1Q9NUG6 133 aa24.78■■□□□ 1.56
SND1-214ENST00000489417 SERPINA10Q9UK55 444 aa24.78■■□□□ 1.56
SND1-214ENST00000489417 ADAMTSL1Q8N6G6 1762 aa24.78■■□□□ 1.56
SND1-214ENST00000489417 K7ELQ4 463 aaPredicted RBP24.78■■□□□ 1.56
SND1-214ENST00000489417 HMGB1P09429 215 aaKnown RBP24.78■■□□□ 1.56
SND1-214ENST00000489417 ZDHHC15Q96MV8 337 aa24.78■■□□□ 1.56
SND1-214ENST00000489417 GMLQ99445 158 aa24.78■■□□□ 1.56
SND1-214ENST00000489417 PPARAQ07869 468 aa24.77■■□□□ 1.56
SND1-214ENST00000489417 TGFBRAP1Q8WUH2 860 aa24.77■■□□□ 1.56
SND1-214ENST00000489417 CTDSPL2Q05D32 466 aa24.76■■□□□ 1.55
SND1-214ENST00000489417 COL9A3Q14050 684 aaPredicted RBP24.76■■□□□ 1.55
SND1-214ENST00000489417 TNIP1Q15025 636 aa24.76■■□□□ 1.55
SND1-214ENST00000489417 APOBEC3HQ6NTF7 200 aaKnown RBP24.76■■□□□ 1.55
SND1-214ENST00000489417 CTR9Q6PD62 1173 aa24.76■■□□□ 1.55
SND1-214ENST00000489417 AGBL3Q8NEM8 1001 aa24.76■■□□□ 1.55
SND1-214ENST00000489417 ARPP21Q9UBL0 812 aaPredicted RBP24.76■■□□□ 1.55
SND1-214ENST00000489417 MKRN1Q9UHC7 482 aaKnown RBP24.76■■□□□ 1.55
SND1-214ENST00000489417 ANAPC4Q9UJX5 808 aa24.76■■□□□ 1.55
SND1-214ENST00000489417 MINDY4BA8MYZ0 360 aa24.75■■□□□ 1.55
SND1-214ENST00000489417 SBK1Q52WX2 424 aa24.75■■□□□ 1.55
SND1-214ENST00000489417 USP40Q9NVE5 1235 aa24.75■■□□□ 1.55
SND1-214ENST00000489417 NAV1Q8NEY1 1877 aa24.74■■□□□ 1.55
SND1-214ENST00000489417 USP17L12C9JPN9 530 aa24.74■■□□□ 1.55
SND1-214ENST00000489417 USP17L21D6R901 530 aa24.74■■□□□ 1.55
SND1-214ENST00000489417 RBM5P52756 815 aaKnown RBP eCLIP24.74■■□□□ 1.55
SND1-214ENST00000489417 AK2P54819 239 aa24.74■■□□□ 1.55
SND1-214ENST00000489417 AKNAD1Q5T1N1 836 aa24.74■■□□□ 1.55
SND1-214ENST00000489417 DHX32Q7L7V1 743 aaKnown RBP24.74■■□□□ 1.55
SND1-214ENST00000489417 RALYLQ86SE5 291 aaKnown RBP24.74■■□□□ 1.55
SND1-214ENST00000489417 NCOA7Q8NI08 942 aa24.74■■□□□ 1.55
SND1-214ENST00000489417 ALDH8A1Q9H2A2 487 aaPredicted RBP24.74■■□□□ 1.55
SND1-214ENST00000489417 MCM9Q9NXL9 1143 aa24.74■■□□□ 1.55
SND1-214ENST00000489417 HDAC9Q9UKV0 1011 aa24.74■■□□□ 1.55
SND1-214ENST00000489417 ZBTB12Q9Y330 459 aaPredicted RBP24.74■■□□□ 1.55
SND1-214ENST00000489417 LAMB1P07942 1786 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms