RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 TBC1D32Q96NH3 1257 aa19.19■□□□□ 0.66
CLDN11-208ENST00000488989 RNF181Q9P0P0 153 aa19.19■□□□□ 0.66
CLDN11-208ENST00000488989 BAZ2AQ9UIF9 1905 aaKnown RBP19.19■□□□□ 0.66
CLDN11-208ENST00000488989 ZC3H4Q9UPT8 1303 aaKnown RBP19.19■□□□□ 0.66
CLDN11-208ENST00000488989 PATL2C9JE40 543 aaKnown RBP19.18■□□□□ 0.66
CLDN11-208ENST00000488989 BTDP43251 543 aa19.18■□□□□ 0.66
CLDN11-208ENST00000488989 ALX1Q15699 326 aa19.18■□□□□ 0.66
CLDN11-208ENST00000488989 DPF2Q92785 391 aa19.18■□□□□ 0.66
CLDN11-208ENST00000488989 C22orf23Q9BZE7 217 aa19.18■□□□□ 0.66
CLDN11-208ENST00000488989 AATFQ9NY61 560 aaKnown RBP eCLIP19.18■□□□□ 0.66
CLDN11-208ENST00000488989 ZBTB12Q9Y330 459 aaPredicted RBP19.18■□□□□ 0.66
CLDN11-208ENST00000488989 ZMYM6O95789 1325 aa19.18■□□□□ 0.66
CLDN11-208ENST00000488989 PLCG2P16885 1265 aa19.17■□□□□ 0.66
CLDN11-208ENST00000488989 HSPA4P34932 840 aa19.17■□□□□ 0.66
CLDN11-208ENST00000488989 SCNN1DP51172 638 aa19.17■□□□□ 0.66
CLDN11-208ENST00000488989 RHBDL3P58872 404 aa19.17■□□□□ 0.66
CLDN11-208ENST00000488989 NECTIN1Q15223 517 aa19.17■□□□□ 0.66
CLDN11-208ENST00000488989 APOBEC3HQ6NTF7 200 aaKnown RBP19.17■□□□□ 0.66
CLDN11-208ENST00000488989 MTMR14Q8NCE2 650 aa19.17■□□□□ 0.66
CLDN11-208ENST00000488989 KCNB2Q92953 911 aa19.17■□□□□ 0.66
CLDN11-208ENST00000488989 NOL10Q9BSC4 688 aaKnown RBP19.17■□□□□ 0.66
CLDN11-208ENST00000488989 HDAC9Q9UKV0 1011 aa19.17■□□□□ 0.66
CLDN11-208ENST00000488989 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
CLDN11-208ENST00000488989 NAV1Q8NEY1 1877 aa19.16■□□□□ 0.66
CLDN11-208ENST00000488989 GSG1L2A8MUP6 293 aa19.16■□□□□ 0.66
CLDN11-208ENST00000488989 USP17L8P0C7I0 530 aa19.16■□□□□ 0.66
CLDN11-208ENST00000488989 ZNF280AP59817 542 aaPredicted RBP19.16■□□□□ 0.66
CLDN11-208ENST00000488989 GIMAP6Q6P9H5 292 aa19.16■□□□□ 0.66
CLDN11-208ENST00000488989 GPC2Q8N158 579 aa19.16■□□□□ 0.66
CLDN11-208ENST00000488989 IL17RAQ96F46 866 aa19.16■□□□□ 0.66
CLDN11-208ENST00000488989 TSHZ2Q9NRE2 1034 aa19.16■□□□□ 0.66
CLDN11-208ENST00000488989 RBM8AQ9Y5S9 174 aaKnown RBP19.16■□□□□ 0.66
CLDN11-208ENST00000488989 DDX60LQ5H9U9 1706 aaKnown RBP19.16■□□□□ 0.66
CLDN11-208ENST00000488989 MYH1P12882 1939 aa19.15■□□□□ 0.66
CLDN11-208ENST00000488989 CRNKL1Q9BZJ0 848 aaKnown RBP19.15■□□□□ 0.66
CLDN11-208ENST00000488989 EPB41L4AQ9HCS5 686 aaPredicted RBP19.15■□□□□ 0.66
CLDN11-208ENST00000488989 SLC4A4Q9Y6R1 1079 aa19.15■□□□□ 0.66
CLDN11-208ENST00000488989 LAMB1P07942 1786 aa19.14■□□□□ 0.66
CLDN11-208ENST00000488989 PRKAB2O43741 272 aa19.14■□□□□ 0.65
CLDN11-208ENST00000488989 FGAP02671 866 aa19.14■□□□□ 0.65
CLDN11-208ENST00000488989 MCCP23508 829 aa19.14■□□□□ 0.65
CLDN11-208ENST00000488989 GMPSP49915 693 aaPredicted RBP19.14■□□□□ 0.65
CLDN11-208ENST00000488989 CFAP100Q494V2 611 aa19.14■□□□□ 0.65
CLDN11-208ENST00000488989 IFNL3Q8IZI9 196 aa19.14■□□□□ 0.65
CLDN11-208ENST00000488989 OGFOD1Q8N543 542 aa19.14■□□□□ 0.65
CLDN11-208ENST00000488989 SH3RF3Q8TEJ3 882 aaPredicted RBP19.14■□□□□ 0.65
CLDN11-208ENST00000488989 ZBED3Q96IU2 234 aaPredicted RBP19.14■□□□□ 0.65
CLDN11-208ENST00000488989 ATP8A2Q9NTI2 1148 aa19.14■□□□□ 0.65
CLDN11-208ENST00000488989 MKRN1Q9UHC7 482 aaKnown RBP19.14■□□□□ 0.65
CLDN11-208ENST00000488989 ANAPC15P60006 121 aa19.13■□□□□ 0.65
CLDN11-208ENST00000488989 CTNNA3Q9UI47 895 aa19.13■□□□□ 0.65
CLDN11-208ENST00000488989 GJA3Q9Y6H8 435 aa19.13■□□□□ 0.65
CLDN11-208ENST00000488989 TSGA10IPQ3SY00 556 aa19.12■□□□□ 0.65
CLDN11-208ENST00000488989 CREB3L3Q68CJ9 461 aa19.12■□□□□ 0.65
CLDN11-208ENST00000488989 CDC42EP5Q6NZY7 148 aa19.12■□□□□ 0.65
CLDN11-208ENST00000488989 SDR42E1Q8WUS8 393 aa19.12■□□□□ 0.65
CLDN11-208ENST00000488989 NACAP1Q9BZK3 213 aa19.12■□□□□ 0.65
CLDN11-208ENST00000488989 SPDYE2BA6NHP3 402 aa19.11■□□□□ 0.65
CLDN11-208ENST00000488989 SLC27A2O14975 620 aa19.11■□□□□ 0.65
CLDN11-208ENST00000488989 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
CLDN11-208ENST00000488989 SPDYE6P0CI01 402 aa19.11■□□□□ 0.65
CLDN11-208ENST00000488989 TEX11Q8IYF3 940 aa19.11■□□□□ 0.65
CLDN11-208ENST00000488989 PRMT6Q96LA8 375 aaPredicted RBP19.11■□□□□ 0.65
CLDN11-208ENST00000488989 NAPBQ9H115 298 aa19.11■□□□□ 0.65
CLDN11-208ENST00000488989 DCP1AQ9NPI6 582 aaPredicted RBP19.11■□□□□ 0.65
CLDN11-208ENST00000488989 PALD1Q9ULE6 856 aa19.11■□□□□ 0.65
CLDN11-208ENST00000488989 PCDHAC2Q9Y5I4 1007 aa19.11■□□□□ 0.65
CLDN11-208ENST00000488989 UTRNP46939 3433 aa19.1■□□□□ 0.65
CLDN11-208ENST00000488989 WDHD1O75717 1129 aaPredicted RBP19.1■□□□□ 0.65
CLDN11-208ENST00000488989 APPP05067 770 aa19.1■□□□□ 0.65
CLDN11-208ENST00000488989 CYP21A2P08686 494 aa19.1■□□□□ 0.65
CLDN11-208ENST00000488989 RBM5P52756 815 aaKnown RBP eCLIP19.1■□□□□ 0.65
CLDN11-208ENST00000488989 DLGAP5Q15398 846 aa19.1■□□□□ 0.65
CLDN11-208ENST00000488989 RNF20Q5VTR2 975 aa19.1■□□□□ 0.65
CLDN11-208ENST00000488989 MICALL2Q8IY33 904 aa19.1■□□□□ 0.65
CLDN11-208ENST00000488989 KIF2CQ99661 725 aa19.1■□□□□ 0.65
CLDN11-208ENST00000488989 IDI2Q9BXS1 227 aa19.1■□□□□ 0.65
CLDN11-208ENST00000488989 MYOZ2Q9NPC6 264 aa19.1■□□□□ 0.65
CLDN11-208ENST00000488989 USP40Q9NVE5 1235 aa19.1■□□□□ 0.65
CLDN11-208ENST00000488989 GPRC5DQ9NZD1 345 aa19.1■□□□□ 0.65
CLDN11-208ENST00000488989 CNOT7Q9UIV1 285 aaKnown RBP19.1■□□□□ 0.65
CLDN11-208ENST00000488989 SCN4AP35499 1836 aa19.09■□□□□ 0.65
CLDN11-208ENST00000488989 SHTN1A0MZ66 631 aa19.09■□□□□ 0.65
CLDN11-208ENST00000488989 SBK1Q52WX2 424 aa19.09■□□□□ 0.65
CLDN11-208ENST00000488989 RASEFQ8IZ41 740 aa19.09■□□□□ 0.65
CLDN11-208ENST00000488989 TGFBRAP1Q8WUH2 860 aa19.09■□□□□ 0.65
CLDN11-208ENST00000488989 SNX14Q9Y5W7 946 aa19.09■□□□□ 0.65
CLDN11-208ENST00000488989 FLT1P17948 1338 aa19.08■□□□□ 0.65
CLDN11-208ENST00000488989 DDNO94850 711 aaPredicted RBP19.08■□□□□ 0.64
CLDN11-208ENST00000488989 USP5P45974 858 aa19.08■□□□□ 0.64
CLDN11-208ENST00000488989 TDO2P48775 406 aa19.08■□□□□ 0.64
CLDN11-208ENST00000488989 IMMTQ16891 758 aaKnown RBP19.08■□□□□ 0.64
CLDN11-208ENST00000488989 L3MBTL3Q96JM7 780 aaPredicted RBP19.08■□□□□ 0.64
CLDN11-208ENST00000488989 ANAPC4Q9UJX5 808 aa19.08■□□□□ 0.64
CLDN11-208ENST00000488989 WNT10BO00744 389 aa19.07■□□□□ 0.64
CLDN11-208ENST00000488989 ZKSCAN1P17029 563 aaPredicted RBP19.07■□□□□ 0.64
CLDN11-208ENST00000488989 SPDYE2Q495Y8 402 aa19.07■□□□□ 0.64
CLDN11-208ENST00000488989 FKBP1CQ5VVH2 108 aa19.07■□□□□ 0.64
CLDN11-208ENST00000488989 DPY19L2Q6NUT2 758 aa19.07■□□□□ 0.64
CLDN11-208ENST00000488989 CTR9Q6PD62 1173 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms