RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 WASHC2AQ641Q2 1341 aa6.92□□□□□ -1.3
SF3A3-207ENST00000488934 NPC1L1Q9UHC9 1359 aa6.92□□□□□ -1.3
SF3A3-207ENST00000488934 PKD1L3Q7Z443 1732 aa6.91□□□□□ -1.3
SF3A3-207ENST00000488934 TRIM37O94972 964 aa6.91□□□□□ -1.3
SF3A3-207ENST00000488934 APBA3O96018 575 aa6.91□□□□□ -1.3
SF3A3-207ENST00000488934 CD33P20138 364 aa6.91□□□□□ -1.3
SF3A3-207ENST00000488934 ZEB1P37275 1124 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-207ENST00000488934 ALDH16A1Q8IZ83 802 aa6.91□□□□□ -1.3
SF3A3-207ENST00000488934 BEND7Q8N7W2 519 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-207ENST00000488934 GALNT6Q8NCL4 622 aa6.91□□□□□ -1.3
SF3A3-207ENST00000488934 NOVA2Q9UNW9 492 aaKnown RBP6.91□□□□□ -1.3
SF3A3-207ENST00000488934 DOT1LQ8TEK3 1739 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 SHANK3Q9BYB0 1731 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 EFSO43281 561 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 C21orf2O43822 256 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 AMPD1P23109 780 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 ELOAQ14241 798 aaKnown RBP6.9□□□□□ -1.3
SF3A3-207ENST00000488934 RTN1Q16799 776 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 SWI5Q1ZZU3 235 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 HSP90AB2PQ58FF8 381 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 SH3PXD2AQ5TCZ1 1133 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 EDARADDQ8WWZ3 215 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 CEP63Q96MT8 703 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 ARXQ96QS3 562 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 POLKQ9UBT6 870 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 GGA1Q9UJY5 639 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 DNMT3AQ9Y6K1 912 aaPredicted RBP6.9□□□□□ -1.3
SF3A3-207ENST00000488934 PCDH11XQ9BZA7 1347 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 PCDH11YQ9BZA8 1340 aa6.9□□□□□ -1.3
SF3A3-207ENST00000488934 NCAPD2Q15021 1401 aa6.9□□□□□ -1.31
SF3A3-207ENST00000488934 NUP188Q5SRE5 1749 aa6.9□□□□□ -1.31
SF3A3-207ENST00000488934 BTAF1O14981 1849 aa6.9□□□□□ -1.31
SF3A3-207ENST00000488934 PLSCR1O15162 318 aa6.89□□□□□ -1.31
SF3A3-207ENST00000488934 FBLN1P23142 703 aa6.89□□□□□ -1.31
SF3A3-207ENST00000488934 HMGB2P26583 209 aaKnown RBP6.89□□□□□ -1.31
SF3A3-207ENST00000488934 TNNT2P45379 298 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-207ENST00000488934 ZNF468Q5VIY5 522 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-207ENST00000488934 DEFB132Q7Z7B7 95 aa6.89□□□□□ -1.31
SF3A3-207ENST00000488934 MARCH10Q8NA82 808 aaPredicted RBP6.89□□□□□ -1.31
SF3A3-207ENST00000488934 MEGF6O75095 1541 aa6.89□□□□□ -1.31
SF3A3-207ENST00000488934 NEURL1BA8MQ27 555 aa6.88□□□□□ -1.31
SF3A3-207ENST00000488934 C2CD2LO14523 706 aa6.88□□□□□ -1.31
SF3A3-207ENST00000488934 NBPF6Q5VWK0 638 aa6.88□□□□□ -1.31
SF3A3-207ENST00000488934 TMEM151AQ8N4L1 468 aa6.88□□□□□ -1.31
SF3A3-207ENST00000488934 ZCRB1Q8TBF4 217 aaKnown RBP6.88□□□□□ -1.31
SF3A3-207ENST00000488934 PBXIP1Q96AQ6 731 aa6.88□□□□□ -1.31
SF3A3-207ENST00000488934 SUSD3Q96L08 255 aa6.88□□□□□ -1.31
SF3A3-207ENST00000488934 NBPF4Q96M43 638 aa6.88□□□□□ -1.31
SF3A3-207ENST00000488934 RRAGCQ9HB90 399 aa6.88□□□□□ -1.31
SF3A3-207ENST00000488934 BRD7Q9NPI1 651 aa6.88□□□□□ -1.31
SF3A3-207ENST00000488934 MKL2Q9ULH7 1088 aa6.88□□□□□ -1.31
SF3A3-207ENST00000488934 SPG7Q9UQ90 795 aa6.88□□□□□ -1.31
SF3A3-207ENST00000488934 IGSF1Q8N6C5 1336 aa6.87□□□□□ -1.31
SF3A3-207ENST00000488934 ATG7O95352 703 aa6.87□□□□□ -1.31
SF3A3-207ENST00000488934 EPXP11678 715 aa6.87□□□□□ -1.31
SF3A3-207ENST00000488934 EPB42P16452 691 aa6.87□□□□□ -1.31
SF3A3-207ENST00000488934 WEE1P30291 646 aa6.87□□□□□ -1.31
SF3A3-207ENST00000488934 IRS1P35568 1242 aa6.87□□□□□ -1.31
SF3A3-207ENST00000488934 RASSF7Q02833 373 aa6.87□□□□□ -1.31
SF3A3-207ENST00000488934 IER5Q5VY09 327 aa6.87□□□□□ -1.31
SF3A3-207ENST00000488934 DDX54Q8TDD1 881 aaKnown RBP6.87□□□□□ -1.31
SF3A3-207ENST00000488934 C7orf43Q8WVR3 580 aa6.87□□□□□ -1.31
SF3A3-207ENST00000488934 HSH2DQ96JZ2 352 aa6.87□□□□□ -1.31
SF3A3-207ENST00000488934 CAMKK2Q96RR4 588 aa6.87□□□□□ -1.31
SF3A3-207ENST00000488934 KCNH4Q9UQ05 1017 aa6.87□□□□□ -1.31
SF3A3-207ENST00000488934 ITGB4P16144 1822 aa6.86□□□□□ -1.31
SF3A3-207ENST00000488934 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.86□□□□□ -1.31
SF3A3-207ENST00000488934 GDF11O95390 407 aa6.86□□□□□ -1.31
SF3A3-207ENST00000488934 ALAS2P22557 587 aa6.86□□□□□ -1.31
SF3A3-207ENST00000488934 KCNQ4P56696 695 aa6.86□□□□□ -1.31
SF3A3-207ENST00000488934 EIF4A2Q14240 407 aaKnown RBP6.86□□□□□ -1.31
SF3A3-207ENST00000488934 EZH2Q15910 746 aaKnown RBP6.86□□□□□ -1.31
SF3A3-207ENST00000488934 CC2D1BQ5T0F9 858 aaKnown RBP6.86□□□□□ -1.31
SF3A3-207ENST00000488934 USHBP1Q8N6Y0 703 aa6.86□□□□□ -1.31
SF3A3-207ENST00000488934 EFCC1Q9HA90 598 aa6.86□□□□□ -1.31
SF3A3-207ENST00000488934 LRP5O75197 1615 aa6.86□□□□□ -1.31
SF3A3-207ENST00000488934 LY75O60449 1722 aa6.85□□□□□ -1.31
SF3A3-207ENST00000488934 TGFBR3LH3BV60 316 aa6.85□□□□□ -1.31
SF3A3-207ENST00000488934 HSP90AB1P08238 724 aaKnown RBP6.85□□□□□ -1.31
SF3A3-207ENST00000488934 TYRO3Q06418 890 aa6.85□□□□□ -1.31
SF3A3-207ENST00000488934 AMOTQ4VCS5 1084 aa6.85□□□□□ -1.31
SF3A3-207ENST00000488934 BTLAQ7Z6A9 289 aa6.85□□□□□ -1.31
SF3A3-207ENST00000488934 CFAP53Q96M91 514 aa6.85□□□□□ -1.31
SF3A3-207ENST00000488934 QSER1Q2KHR3 1735 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 KDRP35968 1356 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 SHISA8B8ZZ34 492 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 SIN3BO75182 1162 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 LGR5O75473 907 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 MTHFSP49914 203 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 SPEM2Q0P670 501 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 PLEKHO1Q53GL0 409 aaPredicted RBP6.84□□□□□ -1.31
SF3A3-207ENST00000488934 C1orf141Q5JVX7 400 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 SYT9Q86SS6 491 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 ALYREFQ86V81 257 aaKnown RBP6.84□□□□□ -1.31
SF3A3-207ENST00000488934 IFNL2Q8IZJ0 200 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 ZNF280CQ8ND82 737 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 SYTL4Q96C24 671 aaPredicted RBP6.84□□□□□ -1.31
SF3A3-207ENST00000488934 ACSBG1Q96GR2 724 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 TOGARAM1Q9Y4F4 1720 aa6.84□□□□□ -1.31
SF3A3-207ENST00000488934 VIRMAQ69YN4 1812 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms