RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 BNIP3Q12983 259 aa6.16□□□□□ -1.42
CCDC93-209ENST00000488908 SF3B2Q13435 895 aaKnown RBP6.16□□□□□ -1.42
CCDC93-209ENST00000488908 PDE3AQ14432 1141 aa6.16□□□□□ -1.42
CCDC93-209ENST00000488908 FAM168AQ92567 244 aa6.16□□□□□ -1.42
CCDC93-209ENST00000488908 RC3H2Q9HBD1 1191 aaKnown RBP6.16□□□□□ -1.42
CCDC93-209ENST00000488908 CD8BP10966 210 aa6.15□□□□□ -1.42
CCDC93-209ENST00000488908 FBLN7Q53RD9 439 aa6.15□□□□□ -1.42
CCDC93-209ENST00000488908 KSR1Q8IVT5 923 aa6.15□□□□□ -1.42
CCDC93-209ENST00000488908 PLD6Q8N2A8 252 aaKnown RBP6.15□□□□□ -1.42
CCDC93-209ENST00000488908 GLIS3Q8NEA6 775 aa6.15□□□□□ -1.42
CCDC93-209ENST00000488908 TMEM40Q8WWA1 233 aa6.15□□□□□ -1.42
CCDC93-209ENST00000488908 WDR18Q9BV38 432 aa6.15□□□□□ -1.42
CCDC93-209ENST00000488908 CCDC87Q9NVE4 849 aa6.15□□□□□ -1.42
CCDC93-209ENST00000488908 SERPINA10Q9UK55 444 aa6.15□□□□□ -1.42
CCDC93-209ENST00000488908 FAM87AP0C7U9 286 aa6.14□□□□□ -1.43
CCDC93-209ENST00000488908 FKBP4Q02790 459 aaKnown RBP eCLIP6.14□□□□□ -1.43
CCDC93-209ENST00000488908 AP3B2Q13367 1082 aa6.14□□□□□ -1.43
CCDC93-209ENST00000488908 SLC38A3Q99624 504 aa6.14□□□□□ -1.43
CCDC93-209ENST00000488908 ZNF576Q9H609 170 aa6.14□□□□□ -1.43
CCDC93-209ENST00000488908 PIDD1Q9HB75 910 aa6.14□□□□□ -1.43
CCDC93-209ENST00000488908 VAV3Q9UKW4 847 aa6.14□□□□□ -1.43
CCDC93-209ENST00000488908 PPP1R9AQ9ULJ8 1098 aa6.14□□□□□ -1.43
CCDC93-209ENST00000488908 RNASE1P07998 156 aaKnown RBP6.13□□□□□ -1.43
CCDC93-209ENST00000488908 PRKCQQ04759 706 aa6.13□□□□□ -1.43
CCDC93-209ENST00000488908 CDK5R2Q13319 367 aa6.13□□□□□ -1.43
CCDC93-209ENST00000488908 LCE4AQ5TA78 99 aa6.13□□□□□ -1.43
CCDC93-209ENST00000488908 KIAA0319Q5VV43 1072 aa6.13□□□□□ -1.43
CCDC93-209ENST00000488908 SPOCD1Q6ZMY3 1216 aa6.13□□□□□ -1.43
CCDC93-209ENST00000488908 FAM181AQ8N9Y4 354 aa6.13□□□□□ -1.43
CCDC93-209ENST00000488908 PI4K2BQ8TCG2 481 aa6.13□□□□□ -1.43
CCDC93-209ENST00000488908 ATXN3LQ9H3M9 355 aa6.13□□□□□ -1.43
CCDC93-209ENST00000488908 MBNL3Q9NUK0 354 aaKnown RBP6.13□□□□□ -1.43
CCDC93-209ENST00000488908 TMPRSS2O15393 492 aa6.12□□□□□ -1.43
CCDC93-209ENST00000488908 NEFLP07196 543 aa6.12□□□□□ -1.43
CCDC93-209ENST00000488908 SLFN14P0C7P3 912 aa6.12□□□□□ -1.43
CCDC93-209ENST00000488908 ITPKAP23677 461 aa6.12□□□□□ -1.43
CCDC93-209ENST00000488908 HNRNPUQ00839 825 aaKnown RBP eCLIP6.12□□□□□ -1.43
CCDC93-209ENST00000488908 IFI16Q16666 785 aaKnown RBP6.12□□□□□ -1.43
CCDC93-209ENST00000488908 EHD4Q9H223 541 aa6.12□□□□□ -1.43
CCDC93-209ENST00000488908 MKNK2Q9HBH9 465 aa6.12□□□□□ -1.43
CCDC93-209ENST00000488908 CRIM1Q9NZV1 1036 aa6.12□□□□□ -1.43
CCDC93-209ENST00000488908 ADAMTS6Q9UKP5 1117 aa6.12□□□□□ -1.43
CCDC93-209ENST00000488908 ABL1P00519 1130 aa6.11□□□□□ -1.43
CCDC93-209ENST00000488908 PTPN12Q05209 780 aaKnown RBP6.11□□□□□ -1.43
CCDC93-209ENST00000488908 ARHGAP27Q6ZUM4 889 aa6.11□□□□□ -1.43
CCDC93-209ENST00000488908 LRRN4CLQ8ND94 238 aa6.11□□□□□ -1.43
CCDC93-209ENST00000488908 HRASLS5Q96KN8 279 aa6.11□□□□□ -1.43
CCDC93-209ENST00000488908 TMEM88BA6NKF7 163 aa6.1□□□□□ -1.43
CCDC93-209ENST00000488908 ID3Q02535 119 aa6.1□□□□□ -1.43
CCDC93-209ENST00000488908 AOC3Q16853 763 aa6.1□□□□□ -1.43
CCDC93-209ENST00000488908 SMYD4Q8IYR2 804 aaPredicted RBP6.1□□□□□ -1.43
CCDC93-209ENST00000488908 FANCD2OSQ96PS1 177 aa6.1□□□□□ -1.43
CCDC93-209ENST00000488908 TMEM265A0A087WTH1 108 aa6.09□□□□□ -1.43
CCDC93-209ENST00000488908 CEACAM5P06731 702 aa6.09□□□□□ -1.43
CCDC93-209ENST00000488908 LIG1P18858 919 aa6.09□□□□□ -1.43
CCDC93-209ENST00000488908 CD96P40200 585 aa6.09□□□□□ -1.43
CCDC93-209ENST00000488908 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.43
CCDC93-209ENST00000488908 ANGEL2Q5VTE6 544 aaKnown RBP6.09□□□□□ -1.43
CCDC93-209ENST00000488908 USPL1Q5W0Q7 1092 aa6.09□□□□□ -1.43
CCDC93-209ENST00000488908 FAM84AQ96KN4 292 aa6.09□□□□□ -1.43
CCDC93-209ENST00000488908 KRTAP4-2Q9BYR5 136 aa6.09□□□□□ -1.43
CCDC93-209ENST00000488908 CCDC86Q9H6F5 360 aaKnown RBP6.09□□□□□ -1.43
CCDC93-209ENST00000488908 ANO2Q9NQ90 1003 aa6.09□□□□□ -1.43
CCDC93-209ENST00000488908 ZNF211Q13398 564 aaPredicted RBP6.08□□□□□ -1.44
CCDC93-209ENST00000488908 RPS26P11Q5JNZ5 115 aaPredicted RBP6.08□□□□□ -1.44
CCDC93-209ENST00000488908 SLC23A3Q6PIS1 610 aa6.08□□□□□ -1.44
CCDC93-209ENST00000488908 BHLHE22Q8NFJ8 381 aaPredicted RBP6.08□□□□□ -1.44
CCDC93-209ENST00000488908 WDR89Q96FK6 387 aaPredicted RBP6.08□□□□□ -1.44
CCDC93-209ENST00000488908 NPHS2Q9NP85 383 aa6.08□□□□□ -1.44
CCDC93-209ENST00000488908 BRPF3Q9ULD4 1205 aa6.08□□□□□ -1.44
CCDC93-209ENST00000488908 LRRC10BA6NIK2 292 aa6.07□□□□□ -1.44
CCDC93-209ENST00000488908 RNGTTO60942 597 aaKnown RBP6.07□□□□□ -1.44
CCDC93-209ENST00000488908 OXCT1P55809 520 aa6.07□□□□□ -1.44
CCDC93-209ENST00000488908 TTLL4Q14679 1199 aa6.07□□□□□ -1.44
CCDC93-209ENST00000488908 KIF4BQ2VIQ3 1234 aa6.07□□□□□ -1.44
CCDC93-209ENST00000488908 FLAD1Q8NFF5 587 aa6.07□□□□□ -1.44
CCDC93-209ENST00000488908 DUSP23Q9BVJ7 150 aa6.07□□□□□ -1.44
CCDC93-209ENST00000488908 ZC3H12CQ9C0D7 883 aaKnown RBP6.07□□□□□ -1.44
CCDC93-209ENST00000488908 DISC1Q9NRI5 854 aa6.07□□□□□ -1.44
CCDC93-209ENST00000488908 KRT82Q9NSB4 513 aa6.07□□□□□ -1.44
CCDC93-209ENST00000488908 FAM53CQ9NYF3 392 aa6.07□□□□□ -1.44
CCDC93-209ENST00000488908 PCOLCE2Q9UKZ9 415 aa6.07□□□□□ -1.44
CCDC93-209ENST00000488908 U3KQE9 123 aa6.07□□□□□ -1.44
CCDC93-209ENST00000488908 ZNF862O60290 1169 aa6.06□□□□□ -1.44
CCDC93-209ENST00000488908 CPNE3O75131 537 aaKnown RBP6.06□□□□□ -1.44
CCDC93-209ENST00000488908 LEFTY1O75610 366 aa6.06□□□□□ -1.44
CCDC93-209ENST00000488908 HCLS1P14317 486 aaPredicted RBP6.06□□□□□ -1.44
CCDC93-209ENST00000488908 MESP2Q0VG99 397 aa6.06□□□□□ -1.44
CCDC93-209ENST00000488908 PRPF40BQ6NWY9 871 aaKnown RBP6.06□□□□□ -1.44
CCDC93-209ENST00000488908 ZSWIM9Q86XI8 627 aa6.06□□□□□ -1.44
CCDC93-209ENST00000488908 ABCB6Q9NP58 842 aa6.06□□□□□ -1.44
CCDC93-209ENST00000488908 GSTP1P09211 210 aaKnown RBP6.05□□□□□ -1.44
CCDC93-209ENST00000488908 ZNF157P51786 506 aaPredicted RBP6.05□□□□□ -1.44
CCDC93-209ENST00000488908 PDE3BQ13370 1112 aa6.05□□□□□ -1.44
CCDC93-209ENST00000488908 PHLDB3Q6NSJ2 640 aa6.05□□□□□ -1.44
CCDC93-209ENST00000488908 SSU72Q9NP77 194 aaKnown RBP6.05□□□□□ -1.44
CCDC93-209ENST00000488908 PLAGL2Q9UPG8 496 aa6.05□□□□□ -1.44
CCDC93-209ENST00000488908 PCDHGC5Q9Y5F6 944 aa6.05□□□□□ -1.44
CCDC93-209ENST00000488908 SNX11Q9Y5W9 270 aa6.05□□□□□ -1.44
CCDC93-209ENST00000488908 TMEM238LA0A1B0GVL6 79 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms