RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 PDHXO00330 501 aa8.2□□□□□ -1.1
PTCH1-211ENST00000488809 ALDH1L1O75891 902 aa8.2□□□□□ -1.1
PTCH1-211ENST00000488809 FARP2O94887 1054 aaPredicted RBP8.2□□□□□ -1.1
PTCH1-211ENST00000488809 CCL5P13501 91 aa8.2□□□□□ -1.1
PTCH1-211ENST00000488809 OSBPP22059 807 aa8.2□□□□□ -1.1
PTCH1-211ENST00000488809 ZEB1P37275 1124 aaPredicted RBP8.2□□□□□ -1.1
PTCH1-211ENST00000488809 FCGRTP55899 365 aa8.2□□□□□ -1.1
PTCH1-211ENST00000488809 MTFR1Q15390 333 aa8.2□□□□□ -1.1
PTCH1-211ENST00000488809 CDAN1Q8IWY9 1227 aa8.2□□□□□ -1.1
PTCH1-211ENST00000488809 SHISA4Q96DD7 197 aa8.2□□□□□ -1.1
PTCH1-211ENST00000488809 CPA4Q9UI42 421 aa8.2□□□□□ -1.1
PTCH1-211ENST00000488809 MYH2Q9UKX2 1941 aa8.2□□□□□ -1.1
PTCH1-211ENST00000488809 FANCIQ9NVI1 1328 aa8.2□□□□□ -1.1
PTCH1-211ENST00000488809 DOCK1Q14185 1865 aa8.19□□□□□ -1.1
PTCH1-211ENST00000488809 DOCK3Q8IZD9 2030 aa8.19□□□□□ -1.1
PTCH1-211ENST00000488809 DLL1O00548 723 aa8.19□□□□□ -1.1
PTCH1-211ENST00000488809 EVI5O60447 810 aa8.19□□□□□ -1.1
PTCH1-211ENST00000488809 ECM2O94769 699 aaPredicted RBP8.19□□□□□ -1.1
PTCH1-211ENST00000488809 CACNB3P54284 484 aa8.19□□□□□ -1.1
PTCH1-211ENST00000488809 METTL24Q5JXM2 366 aa8.19□□□□□ -1.1
PTCH1-211ENST00000488809 HHIPL2Q6UWX4 724 aa8.19□□□□□ -1.1
PTCH1-211ENST00000488809 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.19□□□□□ -1.1
PTCH1-211ENST00000488809 FAM151AQ8WW52 585 aa8.19□□□□□ -1.1
PTCH1-211ENST00000488809 SRCIN1Q9C0H9 1055 aa8.19□□□□□ -1.1
PTCH1-211ENST00000488809 IQSEC3Q9UPP2 1182 aaPredicted RBP8.19□□□□□ -1.1
PTCH1-211ENST00000488809 ALPK3Q96L96 1907 aa8.19□□□□□ -1.1
PTCH1-211ENST00000488809 F6X3S4 739 aa8.18□□□□□ -1.1
PTCH1-211ENST00000488809 CXCL11O14625 94 aa8.18□□□□□ -1.1
PTCH1-211ENST00000488809 VAMP4O75379 141 aa8.18□□□□□ -1.1
PTCH1-211ENST00000488809 IFIT1P09914 478 aaKnown RBP8.18□□□□□ -1.1
PTCH1-211ENST00000488809 EPHA10Q5JZY3 1008 aa8.18□□□□□ -1.1
PTCH1-211ENST00000488809 NOL9Q5SY16 702 aaKnown RBP8.18□□□□□ -1.1
PTCH1-211ENST00000488809 SLC4A10Q6U841 1118 aa8.18□□□□□ -1.1
PTCH1-211ENST00000488809 FASTKD5Q7L8L6 764 aaKnown RBP8.18□□□□□ -1.1
PTCH1-211ENST00000488809 FBXO33Q7Z6M2 555 aa8.18□□□□□ -1.1
PTCH1-211ENST00000488809 WDR66Q8TBY9 1149 aa8.18□□□□□ -1.1
PTCH1-211ENST00000488809 U2AF1L4Q8WU68 220 aaKnown RBP8.18□□□□□ -1.1
PTCH1-211ENST00000488809 KCNH4Q9UQ05 1017 aa8.18□□□□□ -1.1
PTCH1-211ENST00000488809 KIF16BQ96L93 1317 aa8.18□□□□□ -1.1
PTCH1-211ENST00000488809 RANBP2P49792 3224 aaKnown RBP8.18□□□□□ -1.1
PTCH1-211ENST00000488809 ZBTB7BO15156 539 aaPredicted RBP8.17□□□□□ -1.1
PTCH1-211ENST00000488809 PDE8BO95263 885 aa8.17□□□□□ -1.1
PTCH1-211ENST00000488809 SGPL1O95470 568 aa8.17□□□□□ -1.1
PTCH1-211ENST00000488809 INPP5BP32019 993 aa8.17□□□□□ -1.1
PTCH1-211ENST00000488809 PRKCZQ05513 592 aa8.17□□□□□ -1.1
PTCH1-211ENST00000488809 APOBEC3HQ6NTF7 200 aaKnown RBP8.17□□□□□ -1.1
PTCH1-211ENST00000488809 MIGA2Q7L4E1 593 aa8.17□□□□□ -1.1
PTCH1-211ENST00000488809 UBE2Q1Q7Z7E8 422 aa8.17□□□□□ -1.1
PTCH1-211ENST00000488809 WDR63Q8IWG1 891 aa8.17□□□□□ -1.1
PTCH1-211ENST00000488809 PXYLP1Q8TE99 480 aa8.17□□□□□ -1.1
PTCH1-211ENST00000488809 PUS3Q9BZE2 481 aaKnown RBP8.17□□□□□ -1.1
PTCH1-211ENST00000488809 ZNF112Q9UJU3 913 aa8.17□□□□□ -1.1
PTCH1-211ENST00000488809 ADGRA2Q96PE1 1338 aa8.17□□□□□ -1.1
PTCH1-211ENST00000488809 PHIPQ8WWQ0 1821 aa8.17□□□□□ -1.1
PTCH1-211ENST00000488809 ATAD5Q96QE3 1844 aa8.17□□□□□ -1.1
PTCH1-211ENST00000488809 COL6A3P12111 3177 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 TNPO2O14787 897 aaKnown RBP8.16□□□□□ -1.1
PTCH1-211ENST00000488809 ADCY3O60266 1144 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 TFRCP02786 760 aaKnown RBP8.16□□□□□ -1.1
PTCH1-211ENST00000488809 BCRP11274 1271 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 SLC5A1P13866 664 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 CTGFP29279 349 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 BCAMP50895 628 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 EXOSC9Q06265 439 aaKnown RBP8.16□□□□□ -1.1
PTCH1-211ENST00000488809 IRF5Q13568 498 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 PUM3Q15397 648 aaKnown RBP8.16□□□□□ -1.1
PTCH1-211ENST00000488809 GRIK5Q16478 980 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 SMCR8Q8TEV9 937 aaPredicted RBP8.16□□□□□ -1.1
PTCH1-211ENST00000488809 SUCLG2Q96I99 432 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 PRO3102Q9H379 93 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 PICK1Q9NRD5 415 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 PNMA3Q9UL41 463 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 SLC45A1Q9Y2W3 748 aa8.16□□□□□ -1.1
PTCH1-211ENST00000488809 INHAP05111 366 aa8.15□□□□□ -1.1
PTCH1-211ENST00000488809 FLT3LGP49771 235 aa8.15□□□□□ -1.1
PTCH1-211ENST00000488809 MNX1P50219 401 aaPredicted RBP8.15□□□□□ -1.1
PTCH1-211ENST00000488809 TCP10Q12799 353 aa8.15□□□□□ -1.1
PTCH1-211ENST00000488809 RABL6Q3YEC7 729 aaPredicted RBP8.15□□□□□ -1.1
PTCH1-211ENST00000488809 GPR153Q6NV75 609 aa8.15□□□□□ -1.1
PTCH1-211ENST00000488809 NECAB2Q7Z6G3 386 aa8.15□□□□□ -1.1
PTCH1-211ENST00000488809 ANKLE1Q8NAG6 615 aa8.15□□□□□ -1.1
PTCH1-211ENST00000488809 COA7Q96BR5 231 aa8.15□□□□□ -1.1
PTCH1-211ENST00000488809 UNC93B1Q9H1C4 597 aa8.15□□□□□ -1.1
PTCH1-211ENST00000488809 BICC1Q9H694 974 aaKnown RBP8.15□□□□□ -1.1
PTCH1-211ENST00000488809 GNL3LQ9NVN8 582 aaKnown RBP8.15□□□□□ -1.1
PTCH1-211ENST00000488809 LRRFIP2Q9Y608 721 aaKnown RBP8.15□□□□□ -1.1
PTCH1-211ENST00000488809 LOC285556D6RIA3 1793 aa8.15□□□□□ -1.11
PTCH1-211ENST00000488809 DDX60LQ5H9U9 1706 aaKnown RBP8.15□□□□□ -1.11
PTCH1-211ENST00000488809 UTYO14607 1347 aa8.14□□□□□ -1.11
PTCH1-211ENST00000488809 A0A0G2JLL6 359 aaPredicted RBP8.14□□□□□ -1.11
PTCH1-211ENST00000488809 LDHBP07195 334 aaKnown RBP8.14□□□□□ -1.11
PTCH1-211ENST00000488809 CYP2C8P10632 490 aa8.14□□□□□ -1.11
PTCH1-211ENST00000488809 LRRC24Q50LG9 513 aa8.14□□□□□ -1.11
PTCH1-211ENST00000488809 GADL1Q6ZQY3 521 aa8.14□□□□□ -1.11
PTCH1-211ENST00000488809 PRRT2Q7Z6L0 340 aaPredicted RBP8.14□□□□□ -1.11
PTCH1-211ENST00000488809 SLF2Q8IX21 1173 aa8.14□□□□□ -1.11
PTCH1-211ENST00000488809 SCYL3Q8IZE3 742 aa8.14□□□□□ -1.11
PTCH1-211ENST00000488809 ZGPATQ8N5A5 531 aaKnown RBP8.14□□□□□ -1.11
PTCH1-211ENST00000488809 VGLL2Q8N8G2 317 aa8.14□□□□□ -1.11
PTCH1-211ENST00000488809 LPIN2Q92539 896 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms