RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 TMED8Q6PL24 325 aaPredicted RBP22.73■■□□□ 1.23
PTCD3-217ENST00000488801 TEPSINQ96N21 525 aa22.73■■□□□ 1.23
PTCD3-217ENST00000488801 VEZTQ9HBM0 779 aa22.73■■□□□ 1.23
PTCD3-217ENST00000488801 RAI14Q9P0K7 980 aa22.73■■□□□ 1.23
PTCD3-217ENST00000488801 LRP2BPQ9P2M1 347 aa22.73■■□□□ 1.23
PTCD3-217ENST00000488801 MYH8P13535 1937 aa22.72■■□□□ 1.23
PTCD3-217ENST00000488801 RHBDL3P58872 404 aa22.72■■□□□ 1.23
PTCD3-217ENST00000488801 GSTO1P78417 241 aa22.72■■□□□ 1.23
PTCD3-217ENST00000488801 TNFAIP1Q13829 316 aa22.72■■□□□ 1.23
PTCD3-217ENST00000488801 ADGRA1Q86SQ6 560 aa22.72■■□□□ 1.23
PTCD3-217ENST00000488801 FAM83AQ86UY5 434 aa22.72■■□□□ 1.23
PTCD3-217ENST00000488801 PI4K2BQ8TCG2 481 aa22.72■■□□□ 1.23
PTCD3-217ENST00000488801 TLL2Q9Y6L7 1015 aa22.72■■□□□ 1.23
PTCD3-217ENST00000488801 COL2A1P02458 1487 aaPredicted RBP22.72■■□□□ 1.23
PTCD3-217ENST00000488801 RASSF10A6NK89 507 aa22.71■■□□□ 1.23
PTCD3-217ENST00000488801 BTDP43251 543 aa22.71■■□□□ 1.23
PTCD3-217ENST00000488801 TTF1Q15361 905 aaPredicted RBP22.71■■□□□ 1.23
PTCD3-217ENST00000488801 ANKRD45Q5TZF3 282 aa22.71■■□□□ 1.23
PTCD3-217ENST00000488801 DNAJC5GQ8N7S2 189 aa22.71■■□□□ 1.23
PTCD3-217ENST00000488801 BOLA2Q9H3K6 86 aa22.71■■□□□ 1.23
PTCD3-217ENST00000488801 LDHCP07864 332 aa22.7■■□□□ 1.22
PTCD3-217ENST00000488801 MX1P20591 662 aa22.7■■□□□ 1.22
PTCD3-217ENST00000488801 CACNB3P54284 484 aa22.7■■□□□ 1.22
PTCD3-217ENST00000488801 NUCB1Q02818 461 aa22.7■■□□□ 1.22
PTCD3-217ENST00000488801 RASA3Q14644 834 aa22.7■■□□□ 1.22
PTCD3-217ENST00000488801 SAPCD2Q86UD0 394 aa22.7■■□□□ 1.22
PTCD3-217ENST00000488801 EDC3Q96F86 508 aaKnown RBP22.7■■□□□ 1.22
PTCD3-217ENST00000488801 IDI2Q9BXS1 227 aa22.7■■□□□ 1.22
PTCD3-217ENST00000488801 PAG1Q9NWQ8 432 aa22.7■■□□□ 1.22
PTCD3-217ENST00000488801 DOCK1Q14185 1865 aa22.7■■□□□ 1.22
PTCD3-217ENST00000488801 PHIPQ8WWQ0 1821 aa22.69■■□□□ 1.22
PTCD3-217ENST00000488801 GOLIM4O00461 696 aa22.69■■□□□ 1.22
PTCD3-217ENST00000488801 WDHD1O75717 1129 aaPredicted RBP22.69■■□□□ 1.22
PTCD3-217ENST00000488801 MAP4K4O95819 1239 aaPredicted RBP22.69■■□□□ 1.22
PTCD3-217ENST00000488801 PRAMEF18Q5VWM3 479 aa22.69■■□□□ 1.22
PTCD3-217ENST00000488801 TSHZ3Q63HK5 1081 aa22.69■■□□□ 1.22
PTCD3-217ENST00000488801 NAA16Q6N069 864 aaPredicted RBP22.69■■□□□ 1.22
PTCD3-217ENST00000488801 GPATCH3Q96I76 525 aa22.69■■□□□ 1.22
PTCD3-217ENST00000488801 DNAJC2Q99543 621 aaKnown RBP22.69■■□□□ 1.22
PTCD3-217ENST00000488801 BCL11AQ9H165 835 aa22.69■■□□□ 1.22
PTCD3-217ENST00000488801 GBA2Q9HCG7 927 aaPredicted RBP22.69■■□□□ 1.22
PTCD3-217ENST00000488801 FAM198AQ9UFP1 575 aa22.69■■□□□ 1.22
PTCD3-217ENST00000488801 STAP2Q9UGK3 403 aa22.69■■□□□ 1.22
PTCD3-217ENST00000488801 PTPRFP10586 1907 aa22.69■■□□□ 1.22
PTCD3-217ENST00000488801 TCP10L2B9ZVM9 353 aa22.68■■□□□ 1.22
PTCD3-217ENST00000488801 IDH1O75874 414 aaKnown RBP22.68■■□□□ 1.22
PTCD3-217ENST00000488801 PPP4CP60510 307 aa22.68■■□□□ 1.22
PTCD3-217ENST00000488801 FKBP1BP68106 108 aa22.68■■□□□ 1.22
PTCD3-217ENST00000488801 NFIAQ12857 509 aa22.68■■□□□ 1.22
PTCD3-217ENST00000488801 CDAN1Q8IWY9 1227 aa22.68■■□□□ 1.22
PTCD3-217ENST00000488801 HHIPL1Q96JK4 782 aa22.68■■□□□ 1.22
PTCD3-217ENST00000488801 ZNF408Q9H9D4 720 aa22.68■■□□□ 1.22
PTCD3-217ENST00000488801 TMOD2Q9NZR1 351 aa22.68■■□□□ 1.22
PTCD3-217ENST00000488801 ATRNL1Q5VV63 1379 aa22.67■■□□□ 1.22
PTCD3-217ENST00000488801 TCRBV5S4A2TA0A5A2 114 aa22.67■■□□□ 1.22
PTCD3-217ENST00000488801 NPM3O75607 178 aaKnown RBP22.67■■□□□ 1.22
PTCD3-217ENST00000488801 TNNI2P48788 182 aa22.67■■□□□ 1.22
PTCD3-217ENST00000488801 MAP3K12Q12852 859 aa22.67■■□□□ 1.22
PTCD3-217ENST00000488801 CHD1LQ86WJ1 897 aa22.67■■□□□ 1.22
PTCD3-217ENST00000488801 TMEM39BQ9GZU3 492 aa22.67■■□□□ 1.22
PTCD3-217ENST00000488801 USP40Q9NVE5 1235 aa22.67■■□□□ 1.22
PTCD3-217ENST00000488801 CENPBP07199 599 aaPredicted RBP22.66■■□□□ 1.22
PTCD3-217ENST00000488801 PDE6AP16499 860 aa22.66■■□□□ 1.22
PTCD3-217ENST00000488801 MAP3K11Q16584 847 aa22.66■■□□□ 1.22
PTCD3-217ENST00000488801 NBPF12Q5TAG4 269 aaPredicted RBP22.66■■□□□ 1.22
PTCD3-217ENST00000488801 MAGEB6Q8N7X4 407 aa22.66■■□□□ 1.22
PTCD3-217ENST00000488801 LNPKQ9C0E8 428 aa22.66■■□□□ 1.22
PTCD3-217ENST00000488801 GLRX3O76003 335 aaKnown RBP22.65■■□□□ 1.22
PTCD3-217ENST00000488801 PDE1AP54750 535 aa22.65■■□□□ 1.22
PTCD3-217ENST00000488801 FAM151AQ8WW52 585 aa22.65■■□□□ 1.22
PTCD3-217ENST00000488801 KLRG1Q96E93 195 aa22.65■■□□□ 1.22
PTCD3-217ENST00000488801 DDX4Q9NQI0 724 aaKnown RBP22.65■■□□□ 1.22
PTCD3-217ENST00000488801 PCNTO95613 3336 aa22.65■■□□□ 1.22
PTCD3-217ENST00000488801 ERC2O15083 957 aa22.64■■□□□ 1.21
PTCD3-217ENST00000488801 ENTPD3O75355 529 aa22.64■■□□□ 1.21
PTCD3-217ENST00000488801 CYP7A1P22680 504 aa22.63■■□□□ 1.21
PTCD3-217ENST00000488801 NF2P35240 595 aa22.63■■□□□ 1.21
PTCD3-217ENST00000488801 ADD2P35612 726 aa22.63■■□□□ 1.21
PTCD3-217ENST00000488801 RGS3P49796 1198 aa22.63■■□□□ 1.21
PTCD3-217ENST00000488801 B4GALNT3Q6L9W6 998 aa22.63■■□□□ 1.21
PTCD3-217ENST00000488801 C2orf69Q8N8R5 385 aa22.63■■□□□ 1.21
PTCD3-217ENST00000488801 KBTBD3Q8NAB2 608 aa22.63■■□□□ 1.21
PTCD3-217ENST00000488801 RIOK1Q9BRS2 568 aaKnown RBP22.63■■□□□ 1.21
PTCD3-217ENST00000488801 OSBPL3Q9H4L5 887 aa22.63■■□□□ 1.21
PTCD3-217ENST00000488801 AATFQ9NY61 560 aaKnown RBP eCLIP22.63■■□□□ 1.21
PTCD3-217ENST00000488801 ZBTB47Q9UFB7 747 aaPredicted RBP22.63■■□□□ 1.21
PTCD3-217ENST00000488801 ABT1Q9ULW3 272 aaKnown RBP22.63■■□□□ 1.21
PTCD3-217ENST00000488801 PLCG2P16885 1265 aa22.62■■□□□ 1.21
PTCD3-217ENST00000488801 SUPT20HL1Q3ZLR7 823 aa22.62■■□□□ 1.21
PTCD3-217ENST00000488801 SLC9C2Q5TAH2 1124 aa22.62■■□□□ 1.21
PTCD3-217ENST00000488801 SH3RF3Q8TEJ3 882 aaPredicted RBP22.62■■□□□ 1.21
PTCD3-217ENST00000488801 ZNF532Q9HCE3 1301 aa22.61■■□□□ 1.21
PTCD3-217ENST00000488801 HUNKP57058 714 aa22.61■■□□□ 1.21
PTCD3-217ENST00000488801 MOB2Q70IA6 237 aa22.61■■□□□ 1.21
PTCD3-217ENST00000488801 CERS3Q8IU89 383 aa22.61■■□□□ 1.21
PTCD3-217ENST00000488801 PLEKHM2Q8IWE5 1019 aa22.61■■□□□ 1.21
PTCD3-217ENST00000488801 ZFPM1Q8IX07 1006 aa22.61■■□□□ 1.21
PTCD3-217ENST00000488801 BAG3O95817 575 aa22.6■■□□□ 1.21
PTCD3-217ENST00000488801 UBE3CQ15386 1083 aa22.6■■□□□ 1.21
PTCD3-217ENST00000488801 DEFB115Q30KQ5 88 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms