RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 SLC9C1Q4G0N8 1177 aa15.41■□□□□ 0.06
TTC3-221ENST00000488522 NBPF11Q86T75 865 aa15.41■□□□□ 0.06
TTC3-221ENST00000488522 MRPL50Q8N5N7 158 aaKnown RBP15.41■□□□□ 0.06
TTC3-221ENST00000488522 WRNIP1Q96S55 665 aa15.41■□□□□ 0.06
TTC3-221ENST00000488522 IQSEC3Q9UPP2 1182 aaPredicted RBP15.41■□□□□ 0.06
TTC3-221ENST00000488522 BTBD19C9JJ37 291 aa15.4■□□□□ 0.06
TTC3-221ENST00000488522 IRF6O14896 467 aa15.4■□□□□ 0.06
TTC3-221ENST00000488522 WDHD1O75717 1129 aaPredicted RBP15.4■□□□□ 0.06
TTC3-221ENST00000488522 CACNB3P54284 484 aa15.4■□□□□ 0.06
TTC3-221ENST00000488522 LACTBP83111 547 aaPredicted RBP15.4■□□□□ 0.06
TTC3-221ENST00000488522 PPATQ06203 517 aa15.4■□□□□ 0.06
TTC3-221ENST00000488522 CHAF1AQ13111 956 aaPredicted RBP15.4■□□□□ 0.06
TTC3-221ENST00000488522 PUM3Q15397 648 aaKnown RBP15.4■□□□□ 0.06
TTC3-221ENST00000488522 DCAF15Q66K64 600 aa15.4■□□□□ 0.06
TTC3-221ENST00000488522 TMEM106CQ9BVX2 250 aa15.4■□□□□ 0.06
TTC3-221ENST00000488522 TMOD2Q9NZR1 351 aa15.4■□□□□ 0.06
TTC3-221ENST00000488522 ZNF112Q9UJU3 913 aa15.4■□□□□ 0.06
TTC3-221ENST00000488522 ADGRA2Q96PE1 1338 aa15.4■□□□□ 0.06
TTC3-221ENST00000488522 RFX5P48382 616 aaPredicted RBP15.39■□□□□ 0.05
TTC3-221ENST00000488522 BCAMP50895 628 aa15.39■□□□□ 0.05
TTC3-221ENST00000488522 ZKSCAN4Q969J2 545 aaPredicted RBP15.39■□□□□ 0.05
TTC3-221ENST00000488522 USP44Q9H0E7 712 aa15.39■□□□□ 0.05
TTC3-221ENST00000488522 KCNH4Q9UQ05 1017 aa15.39■□□□□ 0.05
TTC3-221ENST00000488522 TRIOBPQ9H2D6 2365 aa15.38■□□□□ 0.05
TTC3-221ENST00000488522 FRAT2O75474 233 aaPredicted RBP15.38■□□□□ 0.05
TTC3-221ENST00000488522 IFIT1P09914 478 aaKnown RBP15.38■□□□□ 0.05
TTC3-221ENST00000488522 C17orf99Q6UX52 265 aa15.38■□□□□ 0.05
TTC3-221ENST00000488522 ANKRD23Q86SG2 305 aa15.38■□□□□ 0.05
TTC3-221ENST00000488522 WDR66Q8TBY9 1149 aa15.38■□□□□ 0.05
TTC3-221ENST00000488522 FAM151AQ8WW52 585 aa15.38■□□□□ 0.05
TTC3-221ENST00000488522 ZNF341Q9BYN7 854 aa15.38■□□□□ 0.05
TTC3-221ENST00000488522 EYA2O00167 538 aa15.37■□□□□ 0.05
TTC3-221ENST00000488522 MYCNP04198 464 aaPredicted RBP15.37■□□□□ 0.05
TTC3-221ENST00000488522 FXR1P51114 621 aaKnown RBP eCLIP15.37■□□□□ 0.052e-6■■■□□ 16.4
TTC3-221ENST00000488522 NOL9Q5SY16 702 aaKnown RBP15.37■□□□□ 0.05
TTC3-221ENST00000488522 KLHDC4Q8TBB5 520 aa15.37■□□□□ 0.05
TTC3-221ENST00000488522 ARHGAP39Q9C0H5 1083 aa15.37■□□□□ 0.05
TTC3-221ENST00000488522 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
TTC3-221ENST00000488522 ATRNL1Q5VV63 1379 aa15.36■□□□□ 0.05
TTC3-221ENST00000488522 MOGSQ13724 837 aa15.36■□□□□ 0.05
TTC3-221ENST00000488522 KIF22Q14807 665 aa15.36■□□□□ 0.05
TTC3-221ENST00000488522 LPIN2Q92539 896 aa15.36■□□□□ 0.05
TTC3-221ENST00000488522 SALL1Q9NSC2 1324 aa15.36■□□□□ 0.05
TTC3-221ENST00000488522 RFX7Q2KHR2 1363 aa15.36■□□□□ 0.05
TTC3-221ENST00000488522 SLC5A1P13866 664 aa15.35■□□□□ 0.05
TTC3-221ENST00000488522 INPP5BP32019 993 aa15.35■□□□□ 0.05
TTC3-221ENST00000488522 ATG9AQ7Z3C6 839 aa15.35■□□□□ 0.05
TTC3-221ENST00000488522 DAGLAQ9Y4D2 1042 aa15.35■□□□□ 0.05
TTC3-221ENST00000488522 DOCK2Q92608 1830 aa15.35■□□□□ 0.05
TTC3-221ENST00000488522 RANBP2P49792 3224 aaKnown RBP15.35■□□□□ 0.05
TTC3-221ENST00000488522 CTGFP29279 349 aa15.34■□□□□ 0.05
TTC3-221ENST00000488522 SLC4A8Q2Y0W8 1093 aa15.34■□□□□ 0.05
TTC3-221ENST00000488522 SH3TC2Q8TF17 1288 aa15.34■□□□□ 0.05
TTC3-221ENST00000488522 SSH1Q8WYL5 1049 aa15.34■□□□□ 0.05
TTC3-221ENST00000488522 SHISA4Q96DD7 197 aa15.34■□□□□ 0.05
TTC3-221ENST00000488522 SRRDQ9UH36 339 aa15.34■□□□□ 0.05
TTC3-221ENST00000488522 E9PSI1 815 aa15.33■□□□□ 0.04
TTC3-221ENST00000488522 SEMA3EO15041 775 aa15.33■□□□□ 0.04
TTC3-221ENST00000488522 CIAO1O76071 339 aa15.33■□□□□ 0.04
TTC3-221ENST00000488522 CDC42EP5Q6NZY7 148 aa15.33■□□□□ 0.04
TTC3-221ENST00000488522 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.33■□□□□ 0.04
TTC3-221ENST00000488522 TRIM47Q96LD4 638 aa15.33■□□□□ 0.04
TTC3-221ENST00000488522 FAM198AQ9UFP1 575 aa15.33■□□□□ 0.04
TTC3-221ENST00000488522 PTPRFP10586 1907 aa15.33■□□□□ 0.04
TTC3-221ENST00000488522 MGAMO43451 1857 aa15.32■□□□□ 0.04
TTC3-221ENST00000488522 PDHXO00330 501 aa15.32■□□□□ 0.04
TTC3-221ENST00000488522 PRDX5P30044 214 aa15.32■□□□□ 0.04
TTC3-221ENST00000488522 NFIAQ12857 509 aa15.32■□□□□ 0.04
TTC3-221ENST00000488522 ALDH1L2Q3SY69 923 aa15.32■□□□□ 0.04
TTC3-221ENST00000488522 MIGA2Q7L4E1 593 aa15.32■□□□□ 0.04
TTC3-221ENST00000488522 UBE2Q1Q7Z7E8 422 aa15.32■□□□□ 0.04
TTC3-221ENST00000488522 COLQQ9Y215 455 aaPredicted RBP15.32■□□□□ 0.04
TTC3-221ENST00000488522 CXCL11O14625 94 aa15.31■□□□□ 0.04
TTC3-221ENST00000488522 BCRP11274 1271 aa15.31■□□□□ 0.04
TTC3-221ENST00000488522 OSBPP22059 807 aa15.31■□□□□ 0.04
TTC3-221ENST00000488522 PSMC4P43686 418 aa15.31■□□□□ 0.04
TTC3-221ENST00000488522 MAP3K10Q02779 954 aa15.31■□□□□ 0.04
TTC3-221ENST00000488522 DIXDC1Q155Q3 683 aa15.31■□□□□ 0.04
TTC3-221ENST00000488522 NKX2-3Q8TAU0 364 aa15.31■□□□□ 0.04
TTC3-221ENST00000488522 IDI2Q9BXS1 227 aa15.31■□□□□ 0.04
TTC3-221ENST00000488522 CPA4Q9UI42 421 aa15.31■□□□□ 0.04
TTC3-221ENST00000488522 GAKO14976 1311 aa15.31■□□□□ 0.04
TTC3-221ENST00000488522 PDS5AQ29RF7 1337 aaKnown RBP15.31■□□□□ 0.04
TTC3-221ENST00000488522 AK9Q5TCS8 1911 aa15.31■□□□□ 0.04
TTC3-221ENST00000488522 MYH2Q9UKX2 1941 aa15.31■□□□□ 0.04
TTC3-221ENST00000488522 ENTPD3O75355 529 aa15.3■□□□□ 0.04
TTC3-221ENST00000488522 LDHBP07195 334 aaKnown RBP15.3■□□□□ 0.04
TTC3-221ENST00000488522 HOXD10P28358 340 aa15.3■□□□□ 0.04
TTC3-221ENST00000488522 GRK4P32298 578 aa15.3■□□□□ 0.04
TTC3-221ENST00000488522 DOCK1Q14185 1865 aa15.3■□□□□ 0.04
TTC3-221ENST00000488522 ATP2B3Q16720 1220 aa15.3■□□□□ 0.04
TTC3-221ENST00000488522 SZT2Q5T011 3432 aa15.3■□□□□ 0.04
TTC3-221ENST00000488522 GPAT2Q6NUI2 795 aa15.3■□□□□ 0.04
TTC3-221ENST00000488522 PHIPQ8WWQ0 1821 aa15.3■□□□□ 0.04
TTC3-221ENST00000488522 PARK7Q99497 189 aaKnown RBP15.3■□□□□ 0.04
TTC3-221ENST00000488522 SLC45A1Q9Y2W3 748 aa15.3■□□□□ 0.04
TTC3-221ENST00000488522 A0A0G2JLL6 359 aaPredicted RBP15.29■□□□□ 0.04
TTC3-221ENST00000488522 PHF20L1A8MW92 1017 aa15.29■□□□□ 0.04
TTC3-221ENST00000488522 GJB1P08034 283 aa15.29■□□□□ 0.04
TTC3-221ENST00000488522 GJA8P48165 433 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms