RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.88■■□□□ 1.41
NECAB3-213ENST00000488489 C2CD5Q86YS7 1000 aa23.87■■□□□ 1.41
NECAB3-213ENST00000488489 GZF1Q9H116 711 aaPredicted RBP23.87■■□□□ 1.41
NECAB3-213ENST00000488489 NEDD4P46934 1319 aa23.87■■□□□ 1.41
NECAB3-213ENST00000488489 SCRN1Q12765 414 aa23.87■■□□□ 1.41
NECAB3-213ENST00000488489 AATFQ9NY61 560 aaKnown RBP eCLIP23.87■■□□□ 1.412e-8■■■■□ 22.6
NECAB3-213ENST00000488489 DUOX1Q9NRD9 1551 aa23.86■■□□□ 1.41
NECAB3-213ENST00000488489 TRDNQ13061 729 aa23.86■■□□□ 1.41
NECAB3-213ENST00000488489 SPTY2D1Q68D10 685 aaPredicted RBP23.86■■□□□ 1.41
NECAB3-213ENST00000488489 CYB5R4Q7L1T6 521 aa23.86■■□□□ 1.41
NECAB3-213ENST00000488489 PFKFB2O60825 505 aa23.86■■□□□ 1.41
NECAB3-213ENST00000488489 LDHBP07195 334 aaKnown RBP23.86■■□□□ 1.41
NECAB3-213ENST00000488489 B4E1Z4 1266 aa23.85■■□□□ 1.41
NECAB3-213ENST00000488489 EVCP57679 992 aa23.85■■□□□ 1.41
NECAB3-213ENST00000488489 DZIP1Q86YF9 867 aaKnown RBP23.85■■□□□ 1.41
NECAB3-213ENST00000488489 MPNDQ8N594 471 aa23.85■■□□□ 1.41
NECAB3-213ENST00000488489 MAST2Q6P0Q8 1798 aa23.85■■□□□ 1.41
NECAB3-213ENST00000488489 WDR33Q9C0J8 1336 aaKnown RBP23.84■■□□□ 1.41
NECAB3-213ENST00000488489 CHD4Q14839 1912 aa23.84■■□□□ 1.41
NECAB3-213ENST00000488489 H0YIN7 160 aa23.84■■□□□ 1.41
NECAB3-213ENST00000488489 SMIM22K7EJ46 135 aa23.84■■□□□ 1.41
NECAB3-213ENST00000488489 RIMBP2O15034 1052 aa23.84■■□□□ 1.41
NECAB3-213ENST00000488489 STX6O43752 255 aa23.84■■□□□ 1.41
NECAB3-213ENST00000488489 PDIA3P30101 505 aaKnown RBP23.84■■□□□ 1.41
NECAB3-213ENST00000488489 CHRNA5P30532 468 aa23.84■■□□□ 1.41
NECAB3-213ENST00000488489 BAZ2AQ9UIF9 1905 aaKnown RBP23.84■■□□□ 1.41
NECAB3-213ENST00000488489 WDR19Q8NEZ3 1342 aa23.83■■□□□ 1.41
NECAB3-213ENST00000488489 JAK2O60674 1132 aa23.83■■□□□ 1.41
NECAB3-213ENST00000488489 AKNAD1Q5T1N1 836 aa23.83■■□□□ 1.41
NECAB3-213ENST00000488489 ILDR1Q86SU0 546 aaPredicted RBP23.83■■□□□ 1.41
NECAB3-213ENST00000488489 ZNF274Q96GC6 653 aaPredicted RBP23.83■■□□□ 1.41
NECAB3-213ENST00000488489 ISY1Q9ULR0 285 aaKnown RBP23.83■■□□□ 1.41
NECAB3-213ENST00000488489 MRE11P49959 708 aa23.83■■□□□ 1.4
NECAB3-213ENST00000488489 DIXDC1Q155Q3 683 aa23.83■■□□□ 1.4
NECAB3-213ENST00000488489 MCTP1Q6DN14 999 aa23.83■■□□□ 1.4
NECAB3-213ENST00000488489 TMED8Q6PL24 325 aaPredicted RBP23.83■■□□□ 1.4
NECAB3-213ENST00000488489 DPP8Q6V1X1 898 aaPredicted RBP23.83■■□□□ 1.4
NECAB3-213ENST00000488489 TIAM2Q8IVF5 1701 aa23.82■■□□□ 1.4
NECAB3-213ENST00000488489 CCT2P78371 535 aaKnown RBP23.82■■□□□ 1.4
NECAB3-213ENST00000488489 PPARAQ07869 468 aa23.82■■□□□ 1.4
NECAB3-213ENST00000488489 STYK1Q6J9G0 422 aa23.82■■□□□ 1.4
NECAB3-213ENST00000488489 RRAGDQ9NQL2 400 aaPredicted RBP23.82■■□□□ 1.4
NECAB3-213ENST00000488489 STK11IPQ8N1F8 1099 aa23.81■■□□□ 1.4
NECAB3-213ENST00000488489 STAG1Q8WVM7 1258 aa23.81■■□□□ 1.4
NECAB3-213ENST00000488489 NCOA5Q9HCD5 579 aaKnown RBP23.81■■□□□ 1.4
NECAB3-213ENST00000488489 SLX4Q8IY92 1834 aa23.81■■□□□ 1.4
NECAB3-213ENST00000488489 MINDY4BA8MYZ0 360 aa23.81■■□□□ 1.4
NECAB3-213ENST00000488489 ZSCAN22P10073 491 aaPredicted RBP23.81■■□□□ 1.4
NECAB3-213ENST00000488489 MFSD6Q6ZSS7 791 aa23.81■■□□□ 1.4
NECAB3-213ENST00000488489 ZSWIM5Q9P217 1185 aa23.81■■□□□ 1.4
NECAB3-213ENST00000488489 NAP1L2Q9ULW6 460 aaPredicted RBP23.81■■□□□ 1.4
NECAB3-213ENST00000488489 MTMR6Q9Y217 621 aa23.81■■□□□ 1.4
NECAB3-213ENST00000488489 CYP2D7A0A087X1C5 515 aa23.8■■□□□ 1.4
NECAB3-213ENST00000488489 CTDNEP1O95476 244 aa23.8■■□□□ 1.4
NECAB3-213ENST00000488489 KIAA1551Q9HCM1 1747 aa23.8■■□□□ 1.4
NECAB3-213ENST00000488489 KDM4AO75164 1064 aa23.8■■□□□ 1.4
NECAB3-213ENST00000488489 PTMSP20962 102 aa23.8■■□□□ 1.4
NECAB3-213ENST00000488489 MFSD14BQ5SR56 506 aa23.8■■□□□ 1.4
NECAB3-213ENST00000488489 ZC3H12CQ9C0D7 883 aaKnown RBP23.8■■□□□ 1.4
NECAB3-213ENST00000488489 ANAPC4Q9UJX5 808 aa23.8■■□□□ 1.4
NECAB3-213ENST00000488489 IGSF3O75054 1194 aa23.79■■□□□ 1.4
NECAB3-213ENST00000488489 LARP1BQ659C4 914 aaKnown RBP23.79■■□□□ 1.4
NECAB3-213ENST00000488489 GIMAP6Q6P9H5 292 aa23.79■■□□□ 1.4
NECAB3-213ENST00000488489 CTR9Q6PD62 1173 aa23.79■■□□□ 1.4
NECAB3-213ENST00000488489 IGDCC4Q8TDY8 1250 aa23.79■■□□□ 1.4
NECAB3-213ENST00000488489 PANK2Q9BZ23 570 aa23.79■■□□□ 1.4
NECAB3-213ENST00000488489 CRNKL1Q9BZJ0 848 aaKnown RBP23.79■■□□□ 1.4
NECAB3-213ENST00000488489 COA1Q9GZY4 146 aa23.79■■□□□ 1.4
NECAB3-213ENST00000488489 SENP2Q9HC62 589 aa23.79■■□□□ 1.4
NECAB3-213ENST00000488489 DCP1AQ9NPI6 582 aaPredicted RBP23.79■■□□□ 1.4
NECAB3-213ENST00000488489 KLF18A0A0U1RQI7 1052 aa23.78■■□□□ 1.4
NECAB3-213ENST00000488489 SH2B2O14492 632 aaPredicted RBP23.78■■□□□ 1.4
NECAB3-213ENST00000488489 FOXD4L6Q3SYB3 417 aaPredicted RBP23.78■■□□□ 1.4
NECAB3-213ENST00000488489 FOXD4L3Q6VB84 417 aaPredicted RBP23.78■■□□□ 1.4
NECAB3-213ENST00000488489 NSUN7Q8NE18 718 aaKnown RBP23.78■■□□□ 1.4
NECAB3-213ENST00000488489 SMARCC2Q8TAQ2 1214 aa23.78■■□□□ 1.4
NECAB3-213ENST00000488489 CNNM2Q9H8M5 875 aa23.78■■□□□ 1.4
NECAB3-213ENST00000488489 ANGEL1Q9UNK9 670 aaKnown RBP23.78■■□□□ 1.4
NECAB3-213ENST00000488489 HPS5Q9UPZ3 1129 aa23.78■■□□□ 1.4
NECAB3-213ENST00000488489 FAM205AQ6ZU69 1335 aa23.78■■□□□ 1.4
NECAB3-213ENST00000488489 GOLGA6L22H0YM25 854 aa23.78■■□□□ 1.4
NECAB3-213ENST00000488489 GTF2IP78347 998 aa23.78■■□□□ 1.4
NECAB3-213ENST00000488489 EVX2Q03828 476 aa23.78■■□□□ 1.4
NECAB3-213ENST00000488489 TMX4Q9H1E5 349 aaPredicted RBP23.78■■□□□ 1.4
NECAB3-213ENST00000488489 MYH2Q9UKX2 1941 aa23.78■■□□□ 1.4
NECAB3-213ENST00000488489 USP17L12C9JPN9 530 aa23.77■■□□□ 1.4
NECAB3-213ENST00000488489 USP17L21D6R901 530 aa23.77■■□□□ 1.4
NECAB3-213ENST00000488489 RRP12Q5JTH9 1297 aaKnown RBP23.77■■□□□ 1.4
NECAB3-213ENST00000488489 DDX11Q96FC9 970 aa23.77■■□□□ 1.4
NECAB3-213ENST00000488489 LLPHQ9BRT6 129 aaKnown RBP23.77■■□□□ 1.4
NECAB3-213ENST00000488489 KRT23Q9C075 422 aa23.77■■□□□ 1.4
NECAB3-213ENST00000488489 ZNF219Q9P2Y4 722 aaPredicted RBP23.77■■□□□ 1.4
NECAB3-213ENST00000488489 GSTO1P78417 241 aa23.77■■□□□ 1.4
NECAB3-213ENST00000488489 DOK7Q18PE1 504 aa23.77■■□□□ 1.4
NECAB3-213ENST00000488489 RAB11FIP4Q86YS3 637 aa23.77■■□□□ 1.4
NECAB3-213ENST00000488489 F13A1P00488 732 aa23.76■■□□□ 1.39
NECAB3-213ENST00000488489 SKOR2Q2VWA4 1001 aaPredicted RBP23.76■■□□□ 1.39
NECAB3-213ENST00000488489 TMEM87BQ96K49 555 aa23.76■■□□□ 1.39
NECAB3-213ENST00000488489 TOMM22Q9NS69 142 aa23.76■■□□□ 1.39
NECAB3-213ENST00000488489 ATP8A2Q9NTI2 1148 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms