RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 MICALL2Q8IY33 904 aa15.17■□□□□ 0.02
NELFE-209ENST00000488426 IRS2Q9Y4H2 1338 aa15.17■□□□□ 0.02
NELFE-209ENST00000488426 PDE6AP16499 860 aa15.16■□□□□ 0.02
NELFE-209ENST00000488426 C15orf52Q6ZUT6 534 aaKnown RBP15.16■□□□□ 0.02
NELFE-209ENST00000488426 JMYQ8N9B5 988 aa15.16■□□□□ 0.02
NELFE-209ENST00000488426 MXD3Q9BW11 206 aa15.16■□□□□ 0.02
NELFE-209ENST00000488426 UPF3BQ9BZI7 483 aaKnown RBP15.16■□□□□ 0.02
NELFE-209ENST00000488426 SLKQ9H2G2 1235 aaPredicted RBP15.16■□□□□ 0.02
NELFE-209ENST00000488426 CREBZFQ9NS37 354 aa15.16■□□□□ 0.02
NELFE-209ENST00000488426 TCRBV5S4A2TA0A5A2 114 aa15.16■□□□□ 0.02
NELFE-209ENST00000488426 HSP90AA1P07900 732 aaKnown RBP15.16■□□□□ 0.02
NELFE-209ENST00000488426 HSPD1P10809 573 aaKnown RBP15.16■□□□□ 0.02
NELFE-209ENST00000488426 ATP2B4P23634 1241 aa15.16■□□□□ 0.02
NELFE-209ENST00000488426 HIBADHP31937 336 aaKnown RBP15.16■□□□□ 0.02
NELFE-209ENST00000488426 JAKMIP1Q96N16 626 aaKnown RBP15.16■□□□□ 0.02
NELFE-209ENST00000488426 ZSWIM6Q9HCJ5 1215 aa15.16■□□□□ 0.02
NELFE-209ENST00000488426 COL1A1P02452 1464 aaPredicted RBP15.15■□□□□ 0.02
NELFE-209ENST00000488426 VIL1P09327 827 aaKnown RBP15.15■□□□□ 0.02
NELFE-209ENST00000488426 CASTP20810 708 aaKnown RBP15.15■□□□□ 0.02
NELFE-209ENST00000488426 TBC1D10BQ4KMP7 808 aaPredicted RBP15.15■□□□□ 0.02
NELFE-209ENST00000488426 RBM26Q5T8P6 1007 aaKnown RBP15.15■□□□□ 0.02
NELFE-209ENST00000488426 CST9Q5W186 159 aa15.15■□□□□ 0.02
NELFE-209ENST00000488426 TTC14Q96N46 770 aa15.15■□□□□ 0.02
NELFE-209ENST00000488426 GLIS2Q9BZE0 524 aaPredicted RBP15.15■□□□□ 0.02
NELFE-209ENST00000488426 PUS7LQ9H0K6 701 aaKnown RBP15.15■□□□□ 0.02
NELFE-209ENST00000488426 CYP46A1Q9Y6A2 500 aa15.15■□□□□ 0.02
NELFE-209ENST00000488426 ZNF532Q9HCE3 1301 aa15.15■□□□□ 0.02
NELFE-209ENST00000488426 ASTN2O75129 1339 aaPredicted RBP15.14■□□□□ 0.01
NELFE-209ENST00000488426 MAST2Q6P0Q8 1798 aa15.14■□□□□ 0.01
NELFE-209ENST00000488426 TMEM88BA6NKF7 163 aa15.14■□□□□ 0.01
NELFE-209ENST00000488426 GPAA1O43292 621 aa15.14■□□□□ 0.01
NELFE-209ENST00000488426 DDIT3P35638 169 aa15.14■□□□□ 0.01
NELFE-209ENST00000488426 ADCK5Q3MIX3 580 aa15.14■□□□□ 0.01
NELFE-209ENST00000488426 VPS53Q5VIR6 699 aa15.14■□□□□ 0.01
NELFE-209ENST00000488426 RUFY3Q7L099 469 aa15.14■□□□□ 0.01
NELFE-209ENST00000488426 SPRYD3Q8NCJ5 442 aa15.14■□□□□ 0.01
NELFE-209ENST00000488426 DPF2Q92785 391 aa15.14■□□□□ 0.01
NELFE-209ENST00000488426 CHMP5Q9NZZ3 219 aa15.14■□□□□ 0.01
NELFE-209ENST00000488426 PGAP2Q9UHJ9 254 aa15.14■□□□□ 0.01
NELFE-209ENST00000488426 CTNNA3Q9UI47 895 aa15.14■□□□□ 0.01
NELFE-209ENST00000488426 CIZ1Q9ULV3 898 aaPredicted RBP15.14■□□□□ 0.01
NELFE-209ENST00000488426 POLR2AP24928 1970 aaKnown RBP15.14■□□□□ 0.01
NELFE-209ENST00000488426 G3V3G9 751 aa15.13■□□□□ 0.01
NELFE-209ENST00000488426 IGSF3O75054 1194 aa15.13■□□□□ 0.01
NELFE-209ENST00000488426 DCAF8Q5TAQ9 597 aa15.13■□□□□ 0.01
NELFE-209ENST00000488426 TMED8Q6PL24 325 aaPredicted RBP15.13■□□□□ 0.01
NELFE-209ENST00000488426 MAGEB6Q8N7X4 407 aa15.13■□□□□ 0.01
NELFE-209ENST00000488426 LRP2BPQ9P2M1 347 aa15.13■□□□□ 0.01
NELFE-209ENST00000488426 H7C1D1 291 aa15.12■□□□□ 0.01
NELFE-209ENST00000488426 CYP21A2P08686 494 aa15.12■□□□□ 0.01
NELFE-209ENST00000488426 TMX3Q96JJ7 454 aa15.12■□□□□ 0.01
NELFE-209ENST00000488426 IQSEC3Q9UPP2 1182 aaPredicted RBP15.12■□□□□ 0.01
NELFE-209ENST00000488426 FRAT2O75474 233 aaPredicted RBP15.12■□□□□ 0.01
NELFE-209ENST00000488426 BLOC1S2Q6QNY1 142 aa15.12■□□□□ 0.01
NELFE-209ENST00000488426 ZNF804AQ7Z570 1209 aa15.12■□□□□ 0.01
NELFE-209ENST00000488426 GMLQ99445 158 aa15.12■□□□□ 0.01
NELFE-209ENST00000488426 ALDH8A1Q9H2A2 487 aaPredicted RBP15.12■□□□□ 0.01
NELFE-209ENST00000488426 PDRG1Q9NUG6 133 aa15.12■□□□□ 0.01
NELFE-209ENST00000488426 LAMA4Q16363 1823 aa15.11■□□□□ 0.01
NELFE-209ENST00000488426 FOXP2O15409 715 aa15.11■□□□□ 0.01
NELFE-209ENST00000488426 VEGFBP49765 207 aa15.11■□□□□ 0.01
NELFE-209ENST00000488426 CUL4AQ13619 759 aa15.11■□□□□ 0.01
NELFE-209ENST00000488426 RSBN1LQ6PCB5 846 aaPredicted RBP15.11■□□□□ 0.01
NELFE-209ENST00000488426 AIDAQ96BJ3 306 aa15.11■□□□□ 0.01
NELFE-209ENST00000488426 HMGB1P09429 215 aaKnown RBP15.1■□□□□ 0.01
NELFE-209ENST00000488426 RPS6KB1P23443 525 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 AK2P54819 239 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 PODNQ7Z5L7 613 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 USP48Q86UV5 1035 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 NEK1Q96PY6 1258 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 STRBPQ96SI9 672 aaKnown RBP15.1■□□□□ 0.01
NELFE-209ENST00000488426 CWC22Q9HCG8 908 aaKnown RBP15.1■□□□□ 0.01
NELFE-209ENST00000488426 ABCF2Q9UG63 623 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 SCAF8Q9UPN6 1271 aaKnown RBP15.1■□□□□ 0.01
NELFE-209ENST00000488426 ZMYM6O95789 1325 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 CNTNAP1P78357 1384 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 USP17L3A6NCW0 530 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 USP17L4A6NCW7 530 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 GNAT2P19087 354 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 ANKRD1Q15327 319 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 IMMTQ16891 758 aaKnown RBP15.1■□□□□ 0.01
NELFE-209ENST00000488426 USP17L1Q7RTZ2 530 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 ZGPATQ8N5A5 531 aaKnown RBP15.1■□□□□ 0.01
NELFE-209ENST00000488426 TDRD7Q8NHU6 1098 aaKnown RBP15.1■□□□□ 0.01
NELFE-209ENST00000488426 INTS4Q96HW7 963 aaKnown RBP15.1■□□□□ 0.01
NELFE-209ENST00000488426 RAI14Q9P0K7 980 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 LIMCH1Q9UPQ0 1083 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 TAF6LQ9Y6J9 622 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 SALL1Q9NSC2 1324 aa15.1■□□□□ 0.01
NELFE-209ENST00000488426 FGAP02671 866 aa15.09■□□□□ 0.01
NELFE-209ENST00000488426 RPS12P25398 132 aaKnown RBP15.09■□□□□ 0.01
NELFE-209ENST00000488426 ALX1Q15699 326 aa15.09■□□□□ 0.01
NELFE-209ENST00000488426 DACT2Q5SW24 774 aa15.09■□□□□ 0.01
NELFE-209ENST00000488426 MBD4O95243 580 aa15.08■□□□□ 0.01
NELFE-209ENST00000488426 CPA1P15085 419 aa15.08■□□□□ 0.01
NELFE-209ENST00000488426 SPTY2D1Q68D10 685 aaPredicted RBP15.08■□□□□ 0.01
NELFE-209ENST00000488426 WDR66Q8TBY9 1149 aa15.08■□□□□ 0.01
NELFE-209ENST00000488426 ZC3H15Q8WU90 426 aaKnown RBP15.08■□□□□ 0.01
NELFE-209ENST00000488426 FBXW7Q969H0 707 aa15.08■□□□□ 0.01
NELFE-209ENST00000488426 ZSCAN31Q96LW9 406 aaPredicted RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms