RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 ZFYVE28Q9HCC9 887 aa13.98□□□□□ -0.17
VAMP7-206ENST00000488344 DENND2AQ9ULE3 1009 aa13.98□□□□□ -0.17
VAMP7-206ENST00000488344 NOB1Q9ULX3 412 aaKnown RBP13.98□□□□□ -0.17
VAMP7-206ENST00000488344 CCL15-CCL14A0A0B4J2E2 113 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 SPDYE5A6NIY4 337 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 GNAI3P08754 354 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 CETPP11597 493 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 SP3Q02447 781 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 TAF1CQ15572 869 aaPredicted RBP13.97□□□□□ -0.17
VAMP7-206ENST00000488344 GRIK5Q16478 980 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 CCL15Q16663 113 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 APOBEC3HQ6NTF7 200 aaKnown RBP13.97□□□□□ -0.17
VAMP7-206ENST00000488344 OTOP1Q7RTM1 612 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 ATG9AQ7Z3C6 839 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 ARHGAP45Q92619 1136 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 OTUD5Q96G74 571 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 MS4A4AQ96JQ5 239 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 WRNIP1Q96S55 665 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 SIL1Q9H173 461 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 EFCC1Q9HA90 598 aa13.97□□□□□ -0.17
VAMP7-206ENST00000488344 ZCCHC17Q9NP64 241 aaKnown RBP13.97□□□□□ -0.17
VAMP7-206ENST00000488344 SALL1Q9NSC2 1324 aa13.96□□□□□ -0.17
VAMP7-206ENST00000488344 C19orf67A6NJJ6 358 aa13.96□□□□□ -0.17
VAMP7-206ENST00000488344 LDHBP07195 334 aaKnown RBP13.96□□□□□ -0.17
VAMP7-206ENST00000488344 CACNB3P54284 484 aa13.96□□□□□ -0.17
VAMP7-206ENST00000488344 SNAPC2Q13487 334 aa13.96□□□□□ -0.17
VAMP7-206ENST00000488344 LHX8Q68G74 356 aa13.96□□□□□ -0.17
VAMP7-206ENST00000488344 SLF2Q8IX21 1173 aa13.96□□□□□ -0.17
VAMP7-206ENST00000488344 ZNF341Q9BYN7 854 aa13.96□□□□□ -0.17
VAMP7-206ENST00000488344 LRRFIP2Q9Y608 721 aaKnown RBP13.96□□□□□ -0.17
VAMP7-206ENST00000488344 IPO8O15397 1037 aaKnown RBP13.95□□□□□ -0.18
VAMP7-206ENST00000488344 PPIL2Q13356 520 aa13.95□□□□□ -0.18
VAMP7-206ENST00000488344 CDAN1Q8IWY9 1227 aa13.95□□□□□ -0.18
VAMP7-206ENST00000488344 FAM151AQ8WW52 585 aa13.95□□□□□ -0.18
VAMP7-206ENST00000488344 BRI3BPQ8WY22 251 aa13.95□□□□□ -0.18
VAMP7-206ENST00000488344 PTPN18Q99952 460 aa13.95□□□□□ -0.18
VAMP7-206ENST00000488344 COPRSQ9NQ92 184 aa13.95□□□□□ -0.18
VAMP7-206ENST00000488344 AKAP2Q9Y2D5 859 aa13.95□□□□□ -0.18
VAMP7-206ENST00000488344 PDS5AQ29RF7 1337 aaKnown RBP13.94□□□□□ -0.18
VAMP7-206ENST00000488344 RARSP54136 660 aaKnown RBP13.94□□□□□ -0.18
VAMP7-206ENST00000488344 KIF22Q14807 665 aa13.94□□□□□ -0.18
VAMP7-206ENST00000488344 PRPF38BQ5VTL8 546 aaKnown RBP13.94□□□□□ -0.18
VAMP7-206ENST00000488344 CD99L2Q8TCZ2 262 aa13.94□□□□□ -0.18
VAMP7-206ENST00000488344 PTPN22Q9Y2R2 807 aa13.94□□□□□ -0.18
VAMP7-206ENST00000488344 DAGLAQ9Y4D2 1042 aa13.94□□□□□ -0.18
VAMP7-206ENST00000488344 SNCAIPQ9Y6H5 919 aa13.94□□□□□ -0.18
VAMP7-206ENST00000488344 LAMB1P07942 1786 aa13.94□□□□□ -0.18
VAMP7-206ENST00000488344 GABBR2O75899 941 aa13.93□□□□□ -0.18
VAMP7-206ENST00000488344 SLC34A2O95436 690 aa13.93□□□□□ -0.18
VAMP7-206ENST00000488344 PRDX5P30044 214 aa13.93□□□□□ -0.18
VAMP7-206ENST00000488344 PPATQ06203 517 aa13.93□□□□□ -0.18
VAMP7-206ENST00000488344 SPTY2D1Q68D10 685 aaPredicted RBP13.93□□□□□ -0.18
VAMP7-206ENST00000488344 MTX1Q13505 466 aa13.92□□□□□ -0.18
VAMP7-206ENST00000488344 MVPQ14764 893 aaKnown RBP13.92□□□□□ -0.18
VAMP7-206ENST00000488344 CDC42EP5Q6NZY7 148 aa13.92□□□□□ -0.18
VAMP7-206ENST00000488344 NBPF11Q86T75 865 aa13.92□□□□□ -0.18
VAMP7-206ENST00000488344 DZIP1Q86YF9 867 aaKnown RBP13.92□□□□□ -0.18
VAMP7-206ENST00000488344 MEIS3Q99687 375 aa13.92□□□□□ -0.18
VAMP7-206ENST00000488344 SRGAP3O43295 1099 aa13.91□□□□□ -0.18
VAMP7-206ENST00000488344 TLR2O60603 784 aa13.91□□□□□ -0.18
VAMP7-206ENST00000488344 GNRH1P01148 92 aa13.91□□□□□ -0.18
VAMP7-206ENST00000488344 PHKA1P46020 1223 aa13.91□□□□□ -0.18
VAMP7-206ENST00000488344 DIXDC1Q155Q3 683 aa13.91□□□□□ -0.18
VAMP7-206ENST00000488344 CCDC102BQ68D86 513 aa13.91□□□□□ -0.18
VAMP7-206ENST00000488344 FAM43AQ8N2R8 423 aa13.91□□□□□ -0.18
VAMP7-206ENST00000488344 ZKSCAN4Q969J2 545 aaPredicted RBP13.91□□□□□ -0.18
VAMP7-206ENST00000488344 ARMC5Q96C12 935 aa13.91□□□□□ -0.18
VAMP7-206ENST00000488344 USP40Q9NVE5 1235 aa13.91□□□□□ -0.18
VAMP7-206ENST00000488344 PA2G4Q9UQ80 394 aaKnown RBP13.91□□□□□ -0.18
VAMP7-206ENST00000488344 IRF6O14896 467 aa13.9□□□□□ -0.18
VAMP7-206ENST00000488344 ENTPD3O75355 529 aa13.9□□□□□ -0.18
VAMP7-206ENST00000488344 PRMT2P55345 433 aa13.9□□□□□ -0.18
VAMP7-206ENST00000488344 TCP10Q12799 353 aa13.9□□□□□ -0.18
VAMP7-206ENST00000488344 NOL9Q5SY16 702 aaKnown RBP13.9□□□□□ -0.18
VAMP7-206ENST00000488344 MIGA2Q7L4E1 593 aa13.9□□□□□ -0.18
VAMP7-206ENST00000488344 TMEM106CQ9BVX2 250 aa13.9□□□□□ -0.18
VAMP7-206ENST00000488344 ZNF112Q9UJU3 913 aa13.9□□□□□ -0.18
VAMP7-206ENST00000488344 OTOFQ9HC10 1997 aa13.9□□□□□ -0.18
VAMP7-206ENST00000488344 GAKO14976 1311 aa13.9□□□□□ -0.19
VAMP7-206ENST00000488344 BTBD19C9JJ37 291 aa13.89□□□□□ -0.19
VAMP7-206ENST00000488344 GNAI2P04899 355 aa13.89□□□□□ -0.19
VAMP7-206ENST00000488344 SLC9C1Q4G0N8 1177 aa13.89□□□□□ -0.19
VAMP7-206ENST00000488344 GORABQ5T7V8 394 aa13.89□□□□□ -0.19
VAMP7-206ENST00000488344 ATF7IPQ6VMQ6 1270 aa13.89□□□□□ -0.19
VAMP7-206ENST00000488344 ANKRD23Q86SG2 305 aa13.89□□□□□ -0.19
VAMP7-206ENST00000488344 IDI2Q9BXS1 227 aa13.89□□□□□ -0.19
VAMP7-206ENST00000488344 A0A1B0GUL7 405 aa13.88□□□□□ -0.19
VAMP7-206ENST00000488344 MAP4K4O95819 1239 aaPredicted RBP13.88□□□□□ -0.19
VAMP7-206ENST00000488344 INPP5BP32019 993 aa13.88□□□□□ -0.19
VAMP7-206ENST00000488344 GSTO1P78417 241 aa13.88□□□□□ -0.19
VAMP7-206ENST00000488344 NFIAQ12857 509 aa13.88□□□□□ -0.19
VAMP7-206ENST00000488344 RASGRF1Q13972 1273 aa13.88□□□□□ -0.19
VAMP7-206ENST00000488344 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.88□□□□□ -0.19
VAMP7-206ENST00000488344 GCC1Q96CN9 775 aa13.88□□□□□ -0.19
VAMP7-206ENST00000488344 FAM163AQ96GL9 167 aaPredicted RBP13.88□□□□□ -0.19
VAMP7-206ENST00000488344 PICK1Q9NRD5 415 aa13.88□□□□□ -0.19
VAMP7-206ENST00000488344 FAM198AQ9UFP1 575 aa13.88□□□□□ -0.19
VAMP7-206ENST00000488344 ABCF2Q9UG63 623 aa13.88□□□□□ -0.19
VAMP7-206ENST00000488344 KCNH4Q9UQ05 1017 aa13.88□□□□□ -0.19
VAMP7-206ENST00000488344 SSUH2Q9Y2M2 353 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms