RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 GPSM2P81274 684 aa14.59□□□□□ -0.07
HLA-DOB-209ENST00000488325 PRKG1Q13976 671 aa14.59□□□□□ -0.07
HLA-DOB-209ENST00000488325 ATP2B3Q16720 1220 aa14.59□□□□□ -0.07
HLA-DOB-209ENST00000488325 GORABQ5T7V8 394 aa14.59□□□□□ -0.07
HLA-DOB-209ENST00000488325 ARMC9Q7Z3E5 817 aa14.59□□□□□ -0.07
HLA-DOB-209ENST00000488325 EVI5LQ96CN4 794 aa14.59□□□□□ -0.07
HLA-DOB-209ENST00000488325 DBNDD2Q9BQY9 259 aa14.59□□□□□ -0.07
HLA-DOB-209ENST00000488325 PTCH2Q9Y6C5 1203 aa14.59□□□□□ -0.07
HLA-DOB-209ENST00000488325 WTIPA6NIX2 430 aaPredicted RBP14.58□□□□□ -0.08
HLA-DOB-209ENST00000488325 HIP1O00291 1037 aa14.58□□□□□ -0.08
HLA-DOB-209ENST00000488325 PDE8BO95263 885 aa14.58□□□□□ -0.08
HLA-DOB-209ENST00000488325 USP17L8P0C7I0 530 aa14.58□□□□□ -0.08
HLA-DOB-209ENST00000488325 SP3Q02447 781 aa14.58□□□□□ -0.08
HLA-DOB-209ENST00000488325 CRHR2Q13324 411 aa14.58□□□□□ -0.08
HLA-DOB-209ENST00000488325 PUM3Q15397 648 aaKnown RBP14.58□□□□□ -0.08
HLA-DOB-209ENST00000488325 CCDC158Q5M9N0 1113 aa14.58□□□□□ -0.08
HLA-DOB-209ENST00000488325 LDLRAD1Q5T700 205 aa14.58□□□□□ -0.08
HLA-DOB-209ENST00000488325 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.58□□□□□ -0.08
HLA-DOB-209ENST00000488325 REC8O95072 547 aa14.57□□□□□ -0.08
HLA-DOB-209ENST00000488325 SEC24BO95487 1268 aa14.57□□□□□ -0.08
HLA-DOB-209ENST00000488325 SLC5A1P13866 664 aa14.57□□□□□ -0.08
HLA-DOB-209ENST00000488325 NBPF9Q3BBW0 867 aa14.57□□□□□ -0.08
HLA-DOB-209ENST00000488325 VGLL2Q8N8G2 317 aa14.57□□□□□ -0.08
HLA-DOB-209ENST00000488325 TBC1D16Q8TBP0 767 aa14.57□□□□□ -0.08
HLA-DOB-209ENST00000488325 LPIN2Q92539 896 aa14.57□□□□□ -0.08
HLA-DOB-209ENST00000488325 GMLQ99445 158 aa14.57□□□□□ -0.08
HLA-DOB-209ENST00000488325 BOLA2Q9H3K6 86 aa14.57□□□□□ -0.08
HLA-DOB-209ENST00000488325 BSDC1Q9NW68 430 aaPredicted RBP14.57□□□□□ -0.08
HLA-DOB-209ENST00000488325 G3V3G9 751 aa14.56□□□□□ -0.08
HLA-DOB-209ENST00000488325 IFIT1P09914 478 aaKnown RBP14.56□□□□□ -0.08
HLA-DOB-209ENST00000488325 TIMM10P62072 90 aa14.56□□□□□ -0.08
HLA-DOB-209ENST00000488325 RPS8P62241 208 aaKnown RBP14.56□□□□□ -0.08
HLA-DOB-209ENST00000488325 TTC39AQ5SRH9 613 aa14.56□□□□□ -0.08
HLA-DOB-209ENST00000488325 DCAF8Q5TAQ9 597 aa14.56□□□□□ -0.08
HLA-DOB-209ENST00000488325 RUFY2Q8WXA3 655 aa14.56□□□□□ -0.08
HLA-DOB-209ENST00000488325 CELF1Q92879 486 aaKnown RBP14.56□□□□□ -0.08
HLA-DOB-209ENST00000488325 XAGE2Q96GT9 111 aa14.56□□□□□ -0.08
HLA-DOB-209ENST00000488325 HAUS7Q99871 368 aa14.56□□□□□ -0.08
HLA-DOB-209ENST00000488325 ZC3H12CQ9C0D7 883 aaKnown RBP14.56□□□□□ -0.08
HLA-DOB-209ENST00000488325 A0A1W2PPC1 479 aa14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 MAP4K4O95819 1239 aaPredicted RBP14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 CHMLP26374 656 aa14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 TICAM2Q86XR7 235 aa14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 SLC10A4Q96EP9 437 aa14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 DDRGK1Q96HY6 314 aa14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 TBC1D32Q96NH3 1257 aa14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 C22orf23Q9BZE7 217 aa14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 DIAPH3Q9NSV4 1193 aa14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 ANGEL1Q9UNK9 670 aaKnown RBP14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 RFX7Q2KHR2 1363 aa14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 COL4A1P02462 1669 aa14.55□□□□□ -0.08
HLA-DOB-209ENST00000488325 ZBTB48P10074 688 aaPredicted RBP14.54□□□□□ -0.08
HLA-DOB-209ENST00000488325 FGFR2P21802 821 aa14.54□□□□□ -0.08
HLA-DOB-209ENST00000488325 CHRNDQ07001 517 aa14.54□□□□□ -0.08
HLA-DOB-209ENST00000488325 SHISA4Q96DD7 197 aa14.54□□□□□ -0.08
HLA-DOB-209ENST00000488325 WNK4Q96J92 1243 aa14.54□□□□□ -0.08
HLA-DOB-209ENST00000488325 FSD1Q9BTV5 496 aa14.54□□□□□ -0.08
HLA-DOB-209ENST00000488325 ANKRD2Q9GZV1 360 aa14.54□□□□□ -0.08
HLA-DOB-209ENST00000488325 AK9Q5TCS8 1911 aa14.54□□□□□ -0.08
HLA-DOB-209ENST00000488325 UQCRFS1P1P0C7P4 283 aa14.53□□□□□ -0.08
HLA-DOB-209ENST00000488325 ADORA1P30542 326 aa14.53□□□□□ -0.08
HLA-DOB-209ENST00000488325 UBE4AQ14139 1066 aa14.53□□□□□ -0.08
HLA-DOB-209ENST00000488325 LRRFIP1Q32MZ4 808 aaKnown RBP14.53□□□□□ -0.08
HLA-DOB-209ENST00000488325 OTUD7BQ6GQQ9 843 aa14.53□□□□□ -0.08
HLA-DOB-209ENST00000488325 SH3TC2Q8TF17 1288 aa14.53□□□□□ -0.08
HLA-DOB-209ENST00000488325 ZNF512BQ96KM6 892 aaPredicted RBP14.53□□□□□ -0.08
HLA-DOB-209ENST00000488325 ESYT1Q9BSJ8 1104 aa14.53□□□□□ -0.08
HLA-DOB-209ENST00000488325 FZD1Q9UP38 647 aa14.53□□□□□ -0.08
HLA-DOB-209ENST00000488325 STXBP5LQ9Y2K9 1186 aa14.53□□□□□ -0.08
HLA-DOB-209ENST00000488325 NR2E3Q9Y5X4 410 aa14.53□□□□□ -0.08
HLA-DOB-209ENST00000488325 EPB41L2O43491 1005 aaKnown RBP14.52□□□□□ -0.09
HLA-DOB-209ENST00000488325 ARHGEF6Q15052 776 aa14.52□□□□□ -0.09
HLA-DOB-209ENST00000488325 HELBQ8NG08 1087 aaPredicted RBP14.52□□□□□ -0.09
HLA-DOB-209ENST00000488325 CLMNQ96JQ2 1002 aa14.52□□□□□ -0.09
HLA-DOB-209ENST00000488325 DNAJC2Q99543 621 aaKnown RBP14.52□□□□□ -0.09
HLA-DOB-209ENST00000488325 HTATIP2Q9BUP3 242 aa14.52□□□□□ -0.09
HLA-DOB-209ENST00000488325 PSME4Q14997 1843 aa14.52□□□□□ -0.09
HLA-DOB-209ENST00000488325 LAMB1P07942 1786 aa14.52□□□□□ -0.09
HLA-DOB-209ENST00000488325 RAD50Q92878 1312 aa14.51□□□□□ -0.09
HLA-DOB-209ENST00000488325 SPEF2Q9C093 1822 aa14.51□□□□□ -0.09
HLA-DOB-209ENST00000488325 WNT10BO00744 389 aa14.51□□□□□ -0.09
HLA-DOB-209ENST00000488325 UFL1O94874 794 aa14.51□□□□□ -0.09
HLA-DOB-209ENST00000488325 DEFB123Q8N688 67 aa14.51□□□□□ -0.09
HLA-DOB-209ENST00000488325 PAG1Q9NWQ8 432 aa14.51□□□□□ -0.09
HLA-DOB-209ENST00000488325 MINPP1Q9UNW1 487 aa14.51□□□□□ -0.09
HLA-DOB-209ENST00000488325 ARAP2Q8WZ64 1704 aa14.5□□□□□ -0.09
HLA-DOB-209ENST00000488325 USP17L3A6NCW0 530 aa14.5□□□□□ -0.09
HLA-DOB-209ENST00000488325 USP17L4A6NCW7 530 aa14.5□□□□□ -0.09
HLA-DOB-209ENST00000488325 TAF5LO75529 589 aa14.5□□□□□ -0.09
HLA-DOB-209ENST00000488325 KCNJ4P48050 445 aa14.5□□□□□ -0.09
HLA-DOB-209ENST00000488325 RBM25P49756 843 aaKnown RBP14.5□□□□□ -0.09
HLA-DOB-209ENST00000488325 USP17L1Q7RTZ2 530 aa14.5□□□□□ -0.09
HLA-DOB-209ENST00000488325 KBTBD3Q8NAB2 608 aa14.5□□□□□ -0.09
HLA-DOB-209ENST00000488325 PTPN18Q99952 460 aa14.5□□□□□ -0.09
HLA-DOB-209ENST00000488325 PODXL2Q9NZ53 605 aa14.5□□□□□ -0.09
HLA-DOB-209ENST00000488325 MCCP23508 829 aa14.49□□□□□ -0.09
HLA-DOB-209ENST00000488325 ARID4AP29374 1257 aaPredicted RBP14.49□□□□□ -0.09
HLA-DOB-209ENST00000488325 CCDC102BQ68D86 513 aa14.49□□□□□ -0.09
HLA-DOB-209ENST00000488325 KIAA1211Q6ZU35 1233 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms