RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CREBZFQ9NS37 354 aa19.06■□□□□ 0.64
C9orf3-219ENST00000488186 USP40Q9NVE5 1235 aa19.06■□□□□ 0.64
C9orf3-219ENST00000488186 ZNF70Q9UC06 446 aaPredicted RBP19.06■□□□□ 0.64
C9orf3-219ENST00000488186 MROH7-TTC4A0A0A0MT08 1334 aa19.05■□□□□ 0.64
C9orf3-219ENST00000488186 AOX1Q06278 1338 aa19.05■□□□□ 0.64
C9orf3-219ENST00000488186 SALL3Q9BXA9 1300 aa19.05■□□□□ 0.64
C9orf3-219ENST00000488186 TRIM6-TRIM34B2RNG4 842 aa19.05■□□□□ 0.64
C9orf3-219ENST00000488186 BTDP43251 543 aa19.05■□□□□ 0.64
C9orf3-219ENST00000488186 TNNI2P48788 182 aa19.05■□□□□ 0.64
C9orf3-219ENST00000488186 APOBEC3HQ6NTF7 200 aaKnown RBP19.05■□□□□ 0.64
C9orf3-219ENST00000488186 TNFAIP1Q13829 316 aa19.04■□□□□ 0.64
C9orf3-219ENST00000488186 GLIS2Q9BZE0 524 aaPredicted RBP19.04■□□□□ 0.64
C9orf3-219ENST00000488186 GPR75-ASB3A0A0A6YYF3 556 aa19.03■□□□□ 0.64
C9orf3-219ENST00000488186 TMEM88BA6NKF7 163 aa19.03■□□□□ 0.64
C9orf3-219ENST00000488186 TCP10L2B9ZVM9 353 aa19.03■□□□□ 0.64
C9orf3-219ENST00000488186 SPDYE2Q495Y8 402 aa19.03■□□□□ 0.64
C9orf3-219ENST00000488186 CDC42EP5Q6NZY7 148 aa19.03■□□□□ 0.64
C9orf3-219ENST00000488186 RILPL2Q969X0 211 aa19.03■□□□□ 0.64
C9orf3-219ENST00000488186 FSD1Q9BTV5 496 aa19.03■□□□□ 0.64
C9orf3-219ENST00000488186 OSBPL3Q9H4L5 887 aa19.03■□□□□ 0.64
C9orf3-219ENST00000488186 SCAF8Q9UPN6 1271 aaKnown RBP19.03■□□□□ 0.64
C9orf3-219ENST00000488186 GAKO14976 1311 aa19.02■□□□□ 0.64
C9orf3-219ENST00000488186 PDE6AP16499 860 aa19.02■□□□□ 0.64
C9orf3-219ENST00000488186 PLCG2P16885 1265 aa19.02■□□□□ 0.64
C9orf3-219ENST00000488186 PDE4AP27815 886 aa19.02■□□□□ 0.64
C9orf3-219ENST00000488186 KBTBD3Q8NAB2 608 aa19.02■□□□□ 0.64
C9orf3-219ENST00000488186 EVI5LQ96CN4 794 aa19.02■□□□□ 0.64
C9orf3-219ENST00000488186 AATFQ9NY61 560 aaKnown RBP eCLIP19.02■□□□□ 0.64
C9orf3-219ENST00000488186 ADM5C9JUS6 153 aa19.01■□□□□ 0.63
C9orf3-219ENST00000488186 CACNB3P54284 484 aa19.01■□□□□ 0.63
C9orf3-219ENST00000488186 CERS3Q8IU89 383 aa19.01■□□□□ 0.63
C9orf3-219ENST00000488186 DNAJC5GQ8N7S2 189 aa19.01■□□□□ 0.63
C9orf3-219ENST00000488186 ZNF384Q8TF68 577 aa19.01■□□□□ 0.63
C9orf3-219ENST00000488186 DEFB129Q9H1M3 183 aa19.01■□□□□ 0.63
C9orf3-219ENST00000488186 ZNF408Q9H9D4 720 aa19.01■□□□□ 0.63
C9orf3-219ENST00000488186 MYH2Q9UKX2 1941 aa19.01■□□□□ 0.63
C9orf3-219ENST00000488186 ZNF532Q9HCE3 1301 aa19■□□□□ 0.63
C9orf3-219ENST00000488186 MAGEB6P1A0A0J9YX57 407 aa19■□□□□ 0.63
C9orf3-219ENST00000488186 TRAF5O00463 557 aa19■□□□□ 0.63
C9orf3-219ENST00000488186 ZFYP08048 801 aaPredicted RBP19■□□□□ 0.63
C9orf3-219ENST00000488186 MIGA1Q8NAN2 632 aa19■□□□□ 0.63
C9orf3-219ENST00000488186 NF2P35240 595 aa18.99■□□□□ 0.63
C9orf3-219ENST00000488186 ADD2P35612 726 aa18.99■□□□□ 0.63
C9orf3-219ENST00000488186 RASA3Q14644 834 aa18.99■□□□□ 0.63
C9orf3-219ENST00000488186 FKBP1CQ5VVH2 108 aa18.99■□□□□ 0.63
C9orf3-219ENST00000488186 CST9Q5W186 159 aa18.99■□□□□ 0.63
C9orf3-219ENST00000488186 TEX11Q8IYF3 940 aa18.99■□□□□ 0.63
C9orf3-219ENST00000488186 HHIPL1Q96JK4 782 aa18.99■□□□□ 0.63
C9orf3-219ENST00000488186 PPP2R3BQ9Y5P8 575 aa18.99■□□□□ 0.63
C9orf3-219ENST00000488186 RNF113AO15541 343 aaKnown RBP18.98■□□□□ 0.63
C9orf3-219ENST00000488186 PPP4CP60510 307 aa18.98■□□□□ 0.63
C9orf3-219ENST00000488186 UBE3CQ15386 1083 aa18.98■□□□□ 0.63
C9orf3-219ENST00000488186 PRAMEF18Q5VWM3 479 aa18.98■□□□□ 0.63
C9orf3-219ENST00000488186 ADGRA1Q86SQ6 560 aa18.98■□□□□ 0.63
C9orf3-219ENST00000488186 CDCA5Q96FF9 252 aa18.98■□□□□ 0.63
C9orf3-219ENST00000488186 CELF2O95319 508 aaKnown RBP18.97■□□□□ 0.63
C9orf3-219ENST00000488186 DYNLL1P63167 89 aaKnown RBP18.97■□□□□ 0.63
C9orf3-219ENST00000488186 FKBP1BP68106 108 aa18.97■□□□□ 0.63
C9orf3-219ENST00000488186 TCP10Q12799 353 aa18.97■□□□□ 0.63
C9orf3-219ENST00000488186 PICALMQ13492 652 aa18.97■□□□□ 0.63
C9orf3-219ENST00000488186 SUPT20HL1Q3ZLR7 823 aa18.97■□□□□ 0.63
C9orf3-219ENST00000488186 FAM83AQ86UY5 434 aa18.97■□□□□ 0.63
C9orf3-219ENST00000488186 SH3RF3Q8TEJ3 882 aaPredicted RBP18.97■□□□□ 0.63
C9orf3-219ENST00000488186 RASSF10A6NK89 507 aa18.96■□□□□ 0.63
C9orf3-219ENST00000488186 USP5P45974 858 aa18.96■□□□□ 0.63
C9orf3-219ENST00000488186 RGS3P49796 1198 aa18.96■□□□□ 0.63
C9orf3-219ENST00000488186 TTC22Q5TAA0 569 aa18.96■□□□□ 0.63
C9orf3-219ENST00000488186 DLK2Q6UY11 383 aa18.96■□□□□ 0.63
C9orf3-219ENST00000488186 ZSCAN29Q8IWY8 852 aaPredicted RBP18.96■□□□□ 0.63
C9orf3-219ENST00000488186 AIDAQ96BJ3 306 aa18.96■□□□□ 0.63
C9orf3-219ENST00000488186 MYO5AQ9Y4I1 1855 aaKnown RBP18.96■□□□□ 0.63
C9orf3-219ENST00000488186 TCRBV5S4A2TA0A5A2 114 aa18.95■□□□□ 0.62
C9orf3-219ENST00000488186 RHBDL3P58872 404 aa18.95■□□□□ 0.62
C9orf3-219ENST00000488186 FMR1Q06787 632 aaKnown RBP eCLIP18.95■□□□□ 0.62
C9orf3-219ENST00000488186 TTLL12Q14166 644 aaPredicted RBP18.95■□□□□ 0.62
C9orf3-219ENST00000488186 C2orf69Q8N8R5 385 aa18.95■□□□□ 0.62
C9orf3-219ENST00000488186 TGFBRAP1Q8WUH2 860 aa18.95■□□□□ 0.62
C9orf3-219ENST00000488186 FAM151AQ8WW52 585 aa18.95■□□□□ 0.62
C9orf3-219ENST00000488186 KLRG1Q96E93 195 aa18.95■□□□□ 0.62
C9orf3-219ENST00000488186 HOOK2Q96ED9 719 aa18.95■□□□□ 0.62
C9orf3-219ENST00000488186 IDI2Q9BXS1 227 aa18.95■□□□□ 0.62
C9orf3-219ENST00000488186 CRNKL1Q9BZJ0 848 aaKnown RBP18.95■□□□□ 0.62
C9orf3-219ENST00000488186 TMEM39BQ9GZU3 492 aa18.95■□□□□ 0.62
C9orf3-219ENST00000488186 TLL2Q9Y6L7 1015 aa18.95■□□□□ 0.62
C9orf3-219ENST00000488186 MAST2Q6P0Q8 1798 aa18.95■□□□□ 0.62
C9orf3-219ENST00000488186 ENTPD3O75355 529 aa18.94■□□□□ 0.62
C9orf3-219ENST00000488186 NFIAQ12857 509 aa18.94■□□□□ 0.62
C9orf3-219ENST00000488186 SLFNL1Q499Z3 407 aa18.94■□□□□ 0.62
C9orf3-219ENST00000488186 SAPCD2Q86UD0 394 aa18.94■□□□□ 0.62
C9orf3-219ENST00000488186 APPBP2Q92624 585 aa18.94■□□□□ 0.62
C9orf3-219ENST00000488186 CNTNAP1P78357 1384 aa18.93■□□□□ 0.62
C9orf3-219ENST00000488186 DOCK2Q92608 1830 aa18.93■□□□□ 0.62
C9orf3-219ENST00000488186 WDHD1O75717 1129 aaPredicted RBP18.93■□□□□ 0.62
C9orf3-219ENST00000488186 MBD4O95243 580 aa18.93■□□□□ 0.62
C9orf3-219ENST00000488186 TICAM2Q86XR7 235 aa18.93■□□□□ 0.62
C9orf3-219ENST00000488186 ARMT1Q9H993 441 aa18.93■□□□□ 0.62
C9orf3-219ENST00000488186 FAM198AQ9UFP1 575 aa18.93■□□□□ 0.62
C9orf3-219ENST00000488186 HIP1O00291 1037 aa18.92■□□□□ 0.62
C9orf3-219ENST00000488186 PPP1R12BO60237 982 aaPredicted RBP18.92■□□□□ 0.62
C9orf3-219ENST00000488186 CHGBP05060 677 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms